RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 JOSD1Q15040 202 aaPredicted RBP8.13□□□□□ -1.11
SMPD4-216ENST00000461187 C9orf153Q5TBE3 101 aa8.13□□□□□ -1.11
SMPD4-216ENST00000461187 SOSTDC1Q6X4U4 206 aa8.13□□□□□ -1.11
SMPD4-216ENST00000461187 PMCHL2Q9BQD1 86 aa8.13□□□□□ -1.11
SMPD4-216ENST00000461187 HERVK_113P61574 105 aa8.12□□□□□ -1.11
SMPD4-216ENST00000461187 ZNF73O43830 326 aaPredicted RBP8.11□□□□□ -1.11
SMPD4-216ENST00000461187 IGKCP01834 107 aa8.11□□□□□ -1.11
SMPD4-216ENST00000461187 ST20-AS1Q8NBB2 130 aa8.11□□□□□ -1.11
SMPD4-216ENST00000461187 HSPB8Q9UJY1 196 aa8.11□□□□□ -1.11
SMPD4-216ENST00000461187 FABP4P15090 132 aa8.1□□□□□ -1.11
SMPD4-216ENST00000461187 NPC2P61916 151 aa8.1□□□□□ -1.11
SMPD4-216ENST00000461187 ADAMTSL4-AS1Q5T5F5 129 aa8.1□□□□□ -1.11
SMPD4-216ENST00000461187 A0A0J9YXY3 114 aa8.09□□□□□ -1.11
SMPD4-216ENST00000461187 LCE2DQ5TA82 110 aaPredicted RBP8.09□□□□□ -1.11
SMPD4-216ENST00000461187 C5orf52A6NGY3 159 aa8.08□□□□□ -1.12
SMPD4-216ENST00000461187 LCE2CQ5TA81 110 aa8.07□□□□□ -1.12
SMPD4-216ENST00000461187 E9PLD3 99 aa8.06□□□□□ -1.12
SMPD4-216ENST00000461187 SPRR1BP22528 89 aa8.05□□□□□ -1.12
SMPD4-216ENST00000461187 HINT1P49773 126 aaPredicted RBP8.05□□□□□ -1.12
SMPD4-216ENST00000461187 LITAFQ99732 161 aa8.04□□□□□ -1.12
SMPD4-216ENST00000461187 CBY1Q9Y3M2 126 aa8.04□□□□□ -1.12
SMPD4-216ENST00000461187 KRTAP19-2Q3LHN2 52 aa8.03□□□□□ -1.12
SMPD4-216ENST00000461187 HRCT1Q6UXD1 115 aa8.02□□□□□ -1.13
SMPD4-216ENST00000461187 LINC00308Q8TCZ7 52 aa8.02□□□□□ -1.13
SMPD4-216ENST00000461187 LIMD2Q9BT23 127 aa8.02□□□□□ -1.13
SMPD4-216ENST00000461187 SPANXCQ9NY87 97 aa8.02□□□□□ -1.13
SMPD4-216ENST00000461187 SLC25A34Q6PIV7 304 aa8.01□□□□□ -1.13
SMPD4-216ENST00000461187 OR13C6PQ8NH95 151 aa8.01□□□□□ -1.13
SMPD4-216ENST00000461187 DHRS4-AS1Q9P1J3 65 aa8.01□□□□□ -1.13
SMPD4-216ENST00000461187 PCOTHQ58A44 107 aa8□□□□□ -1.13
SMPD4-216ENST00000461187 COLCA2A8K830 154 aa7.99□□□□□ -1.13
SMPD4-216ENST00000461187 TIMM17BO60830 172 aa7.99□□□□□ -1.13
SMPD4-216ENST00000461187 LAMTOR3Q9UHA4 124 aa7.99□□□□□ -1.13
SMPD4-216ENST00000461187 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
SMPD4-216ENST00000461187 SYS1-DBNDD2H3BUS1 97 aa7.98□□□□□ -1.13
SMPD4-216ENST00000461187 SPANXDQ9BXN6 97 aa7.98□□□□□ -1.13
SMPD4-216ENST00000461187 ELOF1P60002 83 aaKnown RBP7.97□□□□□ -1.13
SMPD4-216ENST00000461187 MT1HP80294 61 aa7.97□□□□□ -1.13
SMPD4-216ENST00000461187 IGLV8-61A0A075B6I0 122 aa7.96□□□□□ -1.14
SMPD4-216ENST00000461187 COX7BP24311 80 aa7.96□□□□□ -1.14
SMPD4-216ENST00000461187 CRCT1Q9UGL9 99 aa7.96□□□□□ -1.14
SMPD4-216ENST00000461187 FSIP2Q5CZC0 6907 aa7.96□□□□□ -1.14
SMPD4-216ENST00000461187 CD164Q04900 197 aa7.95□□□□□ -1.14
SMPD4-216ENST00000461187 Q1RN00 199 aa7.95□□□□□ -1.14
SMPD4-216ENST00000461187 C6orf99Q4VX62 202 aa7.95□□□□□ -1.14
SMPD4-216ENST00000461187 LINC01545Q5VT33 79 aa7.95□□□□□ -1.14
SMPD4-216ENST00000461187 ZNF815PA8K554 130 aa7.94□□□□□ -1.14
SMPD4-216ENST00000461187 TAL2Q16559 108 aa7.94□□□□□ -1.14
SMPD4-216ENST00000461187 LINC00518Q8N0U6 118 aa7.94□□□□□ -1.14
SMPD4-216ENST00000461187 TTTY13Q9BZ97 58 aa7.94□□□□□ -1.14
SMPD4-216ENST00000461187 DEFB105AQ8NG35 78 aa7.93□□□□□ -1.14
SMPD4-216ENST00000461187 PRO1933Q9H354 126 aa7.93□□□□□ -1.14
SMPD4-216ENST00000461187 TEX49A0A1B0GTD5 131 aa7.92□□□□□ -1.14
SMPD4-216ENST00000461187 SMIM29Q86T20 159 aa7.92□□□□□ -1.14
SMPD4-216ENST00000461187 H7C2G1 150 aa7.91□□□□□ -1.14
SMPD4-216ENST00000461187 HIST1H2BKO60814 126 aa7.91□□□□□ -1.14
SMPD4-216ENST00000461187 HIST1H2BJP06899 126 aa7.91□□□□□ -1.14
SMPD4-216ENST00000461187 HIST1H2BOP23527 126 aa7.91□□□□□ -1.14
SMPD4-216ENST00000461187 HIST1H2BBP33778 126 aa7.91□□□□□ -1.14
SMPD4-216ENST00000461187 HIST1H2BDP58876 126 aa7.91□□□□□ -1.14
SMPD4-216ENST00000461187 HIST1H2BCP62807 126 aa7.91□□□□□ -1.14
SMPD4-216ENST00000461187 HIST2H2BEQ16778 126 aa7.91□□□□□ -1.14
SMPD4-216ENST00000461187 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.91□□□□□ -1.14
SMPD4-216ENST00000461187 Q5XG85 94 aa7.91□□□□□ -1.14
SMPD4-216ENST00000461187 PET117Q6UWS5 81 aa7.91□□□□□ -1.14
SMPD4-216ENST00000461187 HIST1H2BHQ93079 126 aa7.91□□□□□ -1.14
SMPD4-216ENST00000461187 HIST1H2BNQ99877 126 aa7.91□□□□□ -1.14
SMPD4-216ENST00000461187 HIST1H2BMQ99879 126 aa7.91□□□□□ -1.14
SMPD4-216ENST00000461187 TRBV7-6A0A0J9YX20 115 aa7.9□□□□□ -1.14
SMPD4-216ENST00000461187 SLC7A5P1Q8MH63 180 aa7.9□□□□□ -1.14
SMPD4-216ENST00000461187 CFC1BP0CG36 223 aa7.89□□□□□ -1.15
SMPD4-216ENST00000461187 C1orf195Q5TG92 126 aa7.89□□□□□ -1.15
SMPD4-216ENST00000461187 AKR1D1P51857 326 aa7.88□□□□□ -1.15
SMPD4-216ENST00000461187 IGLV5-48A0A075B6I7 105 aa7.87□□□□□ -1.15
SMPD4-216ENST00000461187 A0A0G2JQZ4 141 aa7.87□□□□□ -1.15
SMPD4-216ENST00000461187 A0A1B0GWB2 263 aa7.87□□□□□ -1.15
SMPD4-216ENST00000461187 C3orf79P0CE67 100 aa7.87□□□□□ -1.15
SMPD4-216ENST00000461187 LORP23490 312 aaPredicted RBP7.86□□□□□ -1.15
SMPD4-216ENST00000461187 FLGP20930 4061 aaPredicted RBP7.85□□□□□ -1.15
SMPD4-216ENST00000461187 KRTAP10-6P60371 365 aaPredicted RBP7.85□□□□□ -1.15
SMPD4-216ENST00000461187 SCGB1D4Q6XE38 83 aa7.85□□□□□ -1.15
SMPD4-216ENST00000461187 RPL37P61927 97 aaKnown RBP7.84□□□□□ -1.15
SMPD4-216ENST00000461187 A6NDN8 102 aa7.83□□□□□ -1.16
SMPD4-216ENST00000461187 IFITM1P13164 125 aa7.83□□□□□ -1.16
SMPD4-216ENST00000461187 COPS9Q8WXC6 57 aa7.83□□□□□ -1.16
SMPD4-216ENST00000461187 ANKRD39Q53RE8 183 aa7.82□□□□□ -1.16
SMPD4-216ENST00000461187 KRTDAPP60985 99 aa7.81□□□□□ -1.16
SMPD4-216ENST00000461187 MUSTN1Q8IVN3 82 aa7.81□□□□□ -1.16
SMPD4-216ENST00000461187 A4D1N5 150 aa7.8□□□□□ -1.16
SMPD4-216ENST00000461187 Q6ZVH6 145 aa7.8□□□□□ -1.16
SMPD4-216ENST00000461187 SMIM11BQ8TCY0 68 aa7.79□□□□□ -1.16
SMPD4-216ENST00000461187 COA6Q5JTJ3 125 aaKnown RBP7.78□□□□□ -1.16
SMPD4-216ENST00000461187 NHP2Q9NX24 153 aaKnown RBP7.78□□□□□ -1.16
SMPD4-216ENST00000461187 M0R2T5 61 aa7.77□□□□□ -1.17
SMPD4-216ENST00000461187 TCL1BO95988 128 aa7.77□□□□□ -1.17
SMPD4-216ENST00000461187 PCP2Q8IVA1 136 aa7.77□□□□□ -1.17
SMPD4-216ENST00000461187 ATOH7Q8N100 152 aa7.77□□□□□ -1.17
SMPD4-216ENST00000461187 TRAV13-2A0A0B4J235 113 aa7.76□□□□□ -1.17
SMPD4-216ENST00000461187 COX6B2Q6YFQ2 88 aa7.76□□□□□ -1.17
SMPD4-216ENST00000461187 C20orf202A1L168 122 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms