RNA–Protein interactions for RNA: ENST00000451903.2

CPS1-204, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 4,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-204ENST00000451903 ABCA12Q86UK0 2595 aa4.15□□□□□ -1.75
CPS1-204ENST00000451903 DSCR10P59022 87 aa4.15□□□□□ -1.75
CPS1-204ENST00000451903 DOPEY1Q5JWR5 2465 aa4.14□□□□□ -1.75
CPS1-204ENST00000451903 ROS1P08922 2347 aa4.14□□□□□ -1.75
CPS1-204ENST00000451903 IGLV5-48A0A075B6I7 105 aa4.14□□□□□ -1.75
CPS1-204ENST00000451903 LELP1Q5T871 98 aa4.14□□□□□ -1.75
CPS1-204ENST00000451903 RTL8CO15255 209 aa4.13□□□□□ -1.75
CPS1-204ENST00000451903 IGKV2-24A0A0C4DH68 120 aa4.13□□□□□ -1.75
CPS1-204ENST00000451903 CASC10Q5T4H9 136 aa4.13□□□□□ -1.75
CPS1-204ENST00000451903 GVQW2A0A096LPI5 108 aaPredicted RBP4.12□□□□□ -1.75
CPS1-204ENST00000451903 IGLV5-52A0A0A0MRZ9 124 aa4.12□□□□□ -1.75
CPS1-204ENST00000451903 A0A1B0GU33 70 aa4.11□□□□□ -1.75
CPS1-204ENST00000451903 ZFYVE26Q68DK2 2539 aa4.11□□□□□ -1.75
CPS1-204ENST00000451903 C14orf177Q52M58 125 aa4.11□□□□□ -1.75
CPS1-204ENST00000451903 SPRR4Q96PI1 79 aa4.11□□□□□ -1.75
CPS1-204ENST00000451903 NAV2Q8IVL1 2488 aa4.1□□□□□ -1.75
CPS1-204ENST00000451903 SLURP1P55000 103 aa4.1□□□□□ -1.75
CPS1-204ENST00000451903 Q8N377 158 aa4.1□□□□□ -1.75
CPS1-204ENST00000451903 APLNQ9ULZ1 77 aa4.1□□□□□ -1.75
CPS1-204ENST00000451903 MUC22E2RYF6 1773 aaPredicted RBP4.1□□□□□ -1.75
CPS1-204ENST00000451903 LY6G6CO95867 125 aa4.1□□□□□ -1.75
CPS1-204ENST00000451903 COL4A2P08572 1712 aa4.09□□□□□ -1.75
CPS1-204ENST00000451903 FLNBO75369 2602 aaKnown RBP4.09□□□□□ -1.75
CPS1-204ENST00000451903 CSPG4Q6UVK1 2322 aa4.09□□□□□ -1.76
CPS1-204ENST00000451903 A8MUU9 505 aa4.08□□□□□ -1.76
CPS1-204ENST00000451903 A0A1W2PNU3 283 aaPredicted RBP4.08□□□□□ -1.76
CPS1-204ENST00000451903 IGFL1Q6UW32 110 aa4.08□□□□□ -1.76
CPS1-204ENST00000451903 A0A096LNT2 108 aa4.07□□□□□ -1.76
CPS1-204ENST00000451903 A0A1B0GVX0 72 aa4.07□□□□□ -1.76
CPS1-204ENST00000451903 U3KQA8 63 aa4.07□□□□□ -1.76
CPS1-204ENST00000451903 Q8NDZ9 215 aa4.06□□□□□ -1.76
CPS1-204ENST00000451903 ZNF575Q86XF7 245 aa4.06□□□□□ -1.76
CPS1-204ENST00000451903 JMJD1CQ15652 2540 aa4.05□□□□□ -1.76
CPS1-204ENST00000451903 ZNF861PO60384 105 aa4.05□□□□□ -1.76
CPS1-204ENST00000451903 LINC00612Q8N6U2 182 aa4.05□□□□□ -1.76
CPS1-204ENST00000451903 EP400Q96L91 3159 aa4.05□□□□□ -1.76
CPS1-204ENST00000451903 IGF2RP11717 2491 aa4.04□□□□□ -1.76
CPS1-204ENST00000451903 Q6YL49 198 aa4.04□□□□□ -1.76
CPS1-204ENST00000451903 CR1P17927 2039 aa4.03□□□□□ -1.76
CPS1-204ENST00000451903 MAPK1IP1LQ8NDC0 245 aa4.03□□□□□ -1.76
CPS1-204ENST00000451903 EPG5Q9HCE0 2579 aa4.02□□□□□ -1.77
CPS1-204ENST00000451903 SRCAPQ6ZRS2 3230 aa4.02□□□□□ -1.77
CPS1-204ENST00000451903 IGLV1-40P01703 118 aa4.02□□□□□ -1.77
CPS1-204ENST00000451903 C15orf56Q8N910 161 aa4.02□□□□□ -1.77
CPS1-204ENST00000451903 HIVEP3Q5T1R4 2406 aa4.02□□□□□ -1.77
CPS1-204ENST00000451903 SPTBN4Q9H254 2564 aa4.01□□□□□ -1.77
CPS1-204ENST00000451903 Q5W150 140 aa4.01□□□□□ -1.77
CPS1-204ENST00000451903 ANKHD1Q8IWZ3 2542 aaKnown RBP4.01□□□□□ -1.77
CPS1-204ENST00000451903 A0A1W2PNN7 141 aa4□□□□□ -1.77
CPS1-204ENST00000451903 MYO9AB2RTY4 2548 aa4□□□□□ -1.77
CPS1-204ENST00000451903 MMP24-AS1A0A0U1RRL7 71 aa3.99□□□□□ -1.77
CPS1-204ENST00000451903 RPL37P61927 97 aaKnown RBP3.98□□□□□ -1.77
CPS1-204ENST00000451903 DEFB135Q30KP9 77 aa3.97□□□□□ -1.77
CPS1-204ENST00000451903 LINC00304Q8N9R0 145 aa3.97□□□□□ -1.77
CPS1-204ENST00000451903 USP9XQ93008 2570 aaPredicted RBP3.96□□□□□ -1.78
CPS1-204ENST00000451903 A0A0D9SG42 100 aa3.96□□□□□ -1.78
CPS1-204ENST00000451903 KLK9Q2XQG4 91 aa3.95□□□□□ -1.78
CPS1-204ENST00000451903 PLAC8Q9NZF1 115 aa3.95□□□□□ -1.78
CPS1-204ENST00000451903 KRTAP11-1Q8IUC1 163 aa3.95□□□□□ -1.78
CPS1-204ENST00000451903 KRTAP29-1A8MX34 341 aaPredicted RBP3.95□□□□□ -1.78
CPS1-204ENST00000451903 DEFB4AO15263 64 aa3.95□□□□□ -1.78
CPS1-204ENST00000451903 PSORS1C2Q9UIG4 136 aa3.95□□□□□ -1.78
CPS1-204ENST00000451903 POLQO75417 2590 aa3.95□□□□□ -1.78
CPS1-204ENST00000451903 C10orf99Q6UWK7 81 aa3.95□□□□□ -1.78
CPS1-204ENST00000451903 F8P00451 2351 aa3.94□□□□□ -1.78
CPS1-204ENST00000451903 FN1P02751 2386 aaKnown RBP3.94□□□□□ -1.78
CPS1-204ENST00000451903 H1FX-AS1Q4G0G2 97 aa3.93□□□□□ -1.78
CPS1-204ENST00000451903 WWC2-AS2Q96NR7 200 aa3.93□□□□□ -1.78
CPS1-204ENST00000451903 TLN1Q9Y490 2541 aaKnown RBP3.92□□□□□ -1.78
CPS1-204ENST00000451903 PANO1I0J062 215 aa3.92□□□□□ -1.78
CPS1-204ENST00000451903 PRR34Q9NV39 138 aa3.92□□□□□ -1.78
CPS1-204ENST00000451903 COX6B2Q6YFQ2 88 aa3.91□□□□□ -1.78
CPS1-204ENST00000451903 FAM168BA1KXE4 195 aa3.9□□□□□ -1.78
CPS1-204ENST00000451903 Q96NJ1 140 aa3.9□□□□□ -1.78
CPS1-204ENST00000451903 PLAC4Q8WY50 150 aa3.9□□□□□ -1.78
CPS1-204ENST00000451903 FLG2Q5D862 2391 aaPredicted RBP3.9□□□□□ -1.79
CPS1-204ENST00000451903 NBDYA0A0U1RRE5 68 aa3.88□□□□□ -1.79
CPS1-204ENST00000451903 KRTAP4-16G5E9R7 235 aaPredicted RBP3.88□□□□□ -1.79
CPS1-204ENST00000451903 LINC00472Q9H8W2 130 aa3.88□□□□□ -1.79
CPS1-204ENST00000451903 A0A0G2JQZ4 141 aa3.88□□□□□ -1.79
CPS1-204ENST00000451903 ANKRD11Q6UB99 2663 aaPredicted RBP3.87□□□□□ -1.79
CPS1-204ENST00000451903 COL27A1Q8IZC6 1860 aaPredicted RBP3.87□□□□□ -1.79
CPS1-204ENST00000451903 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.87□□□□□ -1.79
CPS1-204ENST00000451903 Q8N1X5 172 aa3.86□□□□□ -1.79
CPS1-204ENST00000451903 TYMSOSQ8TAI1 123 aa3.85□□□□□ -1.79
CPS1-204ENST00000451903 LINC01556Q5JQF7 62 aa3.84□□□□□ -1.79
CPS1-204ENST00000451903 KRTAP26-1Q6PEX3 210 aa3.84□□□□□ -1.79
CPS1-204ENST00000451903 ANAPC11Q9NYG5 84 aa3.84□□□□□ -1.79
CPS1-204ENST00000451903 P0C880 135 aa3.83□□□□□ -1.8
CPS1-204ENST00000451903 SETXQ7Z333 2677 aaKnown RBP3.82□□□□□ -1.8
CPS1-204ENST00000451903 CEP295Q9C0D2 2601 aa3.82□□□□□ -1.8
CPS1-204ENST00000451903 A0A087WTM6 91 aa3.82□□□□□ -1.8
CPS1-204ENST00000451903 TNRC18O15417 2968 aaPredicted RBP3.8□□□□□ -1.8
CPS1-204ENST00000451903 ANKRD17O75179 2603 aaKnown RBP3.8□□□□□ -1.8
CPS1-204ENST00000451903 KRTAP21-3Q3LHN1 58 aa3.79□□□□□ -1.8
CPS1-204ENST00000451903 SMR3AQ99954 134 aa3.79□□□□□ -1.8
CPS1-204ENST00000451903 GOLGB1Q14789 3259 aaKnown RBP3.79□□□□□ -1.8
CPS1-204ENST00000451903 TLN2Q9Y4G6 2542 aa3.79□□□□□ -1.8
CPS1-204ENST00000451903 BAHCC1Q9P281 2608 aa3.79□□□□□ -1.8
CPS1-204ENST00000451903 H3BNG1 76 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms