RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 LINC00518Q8N0U6 118 aa3.85□□□□□ -1.79
LINC01961-201ENST00000449954 Q9BRP9 147 aa3.85□□□□□ -1.79
LINC01961-201ENST00000449954 A0A1B0GW15 77 aa3.84□□□□□ -1.79
LINC01961-201ENST00000449954 IGIPA6NJ69 53 aa3.84□□□□□ -1.79
LINC01961-201ENST00000449954 ARPC5O15511 151 aa3.84□□□□□ -1.79
LINC01961-201ENST00000449954 SPINK8P0C7L1 97 aa3.84□□□□□ -1.79
LINC01961-201ENST00000449954 A6NN06 94 aa3.83□□□□□ -1.8
LINC01961-201ENST00000449954 SFTA2Q6UW10 78 aa3.83□□□□□ -1.8
LINC01961-201ENST00000449954 ALKAL2Q6UX46 152 aa3.83□□□□□ -1.8
LINC01961-201ENST00000449954 LINC00299Q6ZSB3 139 aa3.83□□□□□ -1.8
LINC01961-201ENST00000449954 SMIM29Q86T20 159 aa3.83□□□□□ -1.8
LINC01961-201ENST00000449954 S100ZQ8WXG8 99 aa3.83□□□□□ -1.8
LINC01961-201ENST00000449954 NAT8BQ9UHF3 227 aa3.83□□□□□ -1.8
LINC01961-201ENST00000449954 HMSDA8MTL9 139 aa3.82□□□□□ -1.8
LINC01961-201ENST00000449954 F8W036 122 aa3.82□□□□□ -1.8
LINC01961-201ENST00000449954 CEBPGP53567 150 aa3.82□□□□□ -1.8
LINC01961-201ENST00000449954 JOSD1Q15040 202 aaPredicted RBP3.82□□□□□ -1.8
LINC01961-201ENST00000449954 VAMP3Q15836 100 aa3.82□□□□□ -1.8
LINC01961-201ENST00000449954 ORMDL2Q53FV1 153 aa3.82□□□□□ -1.8
LINC01961-201ENST00000449954 ORMDL3Q8N138 153 aa3.82□□□□□ -1.8
LINC01961-201ENST00000449954 BATF3Q9NR55 127 aa3.82□□□□□ -1.8
LINC01961-201ENST00000449954 OSTCQ9NRP0 149 aa3.82□□□□□ -1.8
LINC01961-201ENST00000449954 TRBV10-3A0A0K0K1G6 114 aa3.81□□□□□ -1.8
LINC01961-201ENST00000449954 H3BRM9 83 aa3.81□□□□□ -1.8
LINC01961-201ENST00000449954 H7C2G1 150 aa3.81□□□□□ -1.8
LINC01961-201ENST00000449954 K7EMI3 77 aa3.81□□□□□ -1.8
LINC01961-201ENST00000449954 ZNF345Q14585 488 aa3.81□□□□□ -1.8
LINC01961-201ENST00000449954 Q1RN00 199 aa3.81□□□□□ -1.8
LINC01961-201ENST00000449954 Q6ZVH6 145 aa3.81□□□□□ -1.8
LINC01961-201ENST00000449954 NDUFA13Q9P0J0 144 aa3.81□□□□□ -1.8
LINC01961-201ENST00000449954 TMEM250H0YL14 139 aa3.8□□□□□ -1.8
LINC01961-201ENST00000449954 NCR3O14931 201 aa3.8□□□□□ -1.8
LINC01961-201ENST00000449954 S100A8P05109 93 aa3.8□□□□□ -1.8
LINC01961-201ENST00000449954 IFITM3Q01628 133 aa3.8□□□□□ -1.8
LINC01961-201ENST00000449954 PRELID3AQ96N28 172 aa3.8□□□□□ -1.8
LINC01961-201ENST00000449954 RBM12B-AS1Q9P1G2 102 aa3.8□□□□□ -1.8
LINC01961-201ENST00000449954 A8MWP4 228 aa3.79□□□□□ -1.8
LINC01961-201ENST00000449954 SMLR1H3BR10 107 aa3.79□□□□□ -1.8
LINC01961-201ENST00000449954 SPRR1BP22528 89 aa3.79□□□□□ -1.8
LINC01961-201ENST00000449954 FAM74A3Q4VXF1 159 aa3.79□□□□□ -1.8
LINC01961-201ENST00000449954 C5orf47Q569G3 176 aa3.79□□□□□ -1.8
LINC01961-201ENST00000449954 BOD1L2Q8IYS8 172 aa3.79□□□□□ -1.8
LINC01961-201ENST00000449954 ZNF625Q96I27 306 aaPredicted RBP3.79□□□□□ -1.8
LINC01961-201ENST00000449954 PRO1933Q9H354 126 aa3.79□□□□□ -1.8
LINC01961-201ENST00000449954 MAP1LC3AQ9H492 121 aa3.79□□□□□ -1.8
LINC01961-201ENST00000449954 LAMTOR3Q9UHA4 124 aa3.79□□□□□ -1.8
LINC01961-201ENST00000449954 LAMTOR2Q9Y2Q5 125 aa3.79□□□□□ -1.8
LINC01961-201ENST00000449954 V9GYV3 84 aa3.79□□□□□ -1.8
LINC01961-201ENST00000449954 PCP4L1A6NKN8 68 aa3.78□□□□□ -1.8
LINC01961-201ENST00000449954 SPRR2EP22531 72 aa3.78□□□□□ -1.8
LINC01961-201ENST00000449954 SPRR2BP35325 72 aa3.78□□□□□ -1.8
LINC01961-201ENST00000449954 SPRR2AP35326 72 aa3.78□□□□□ -1.8
LINC01961-201ENST00000449954 TMEM136Q6ZRR5 245 aa3.78□□□□□ -1.8
LINC01961-201ENST00000449954 Q8N8P6 123 aa3.78□□□□□ -1.8
LINC01961-201ENST00000449954 ST20-AS1Q8NBB2 130 aa3.78□□□□□ -1.8
LINC01961-201ENST00000449954 OBSCN-AS1Q96MR7 158 aa3.78□□□□□ -1.8
LINC01961-201ENST00000449954 A0A0G2JQZ4 141 aa3.77□□□□□ -1.81
LINC01961-201ENST00000449954 KANTRA0A1W2PQU2 76 aa3.77□□□□□ -1.81
LINC01961-201ENST00000449954 TCL1BO95988 128 aa3.77□□□□□ -1.81
LINC01961-201ENST00000449954 LINC00158P58513 81 aa3.77□□□□□ -1.81
LINC01961-201ENST00000449954 RPL23P62829 140 aaKnown RBP3.77□□□□□ -1.81
LINC01961-201ENST00000449954 PMVKQ15126 192 aa3.76□□□□□ -1.81
LINC01961-201ENST00000449954 PCP2Q8IVA1 136 aa3.76□□□□□ -1.81
LINC01961-201ENST00000449954 TOMM6Q96B49 74 aa3.76□□□□□ -1.81
LINC01961-201ENST00000449954 LOC107984156A0A0G2JMH3 177 aa3.75□□□□□ -1.81
LINC01961-201ENST00000449954 SMIM27A0A1W2PRY6 76 aa3.75□□□□□ -1.81
LINC01961-201ENST00000449954 DDTP30046 118 aa3.75□□□□□ -1.81
LINC01961-201ENST00000449954 KRTAP10-5P60370 271 aa3.75□□□□□ -1.81
LINC01961-201ENST00000449954 HERV-K104P63124 156 aa3.75□□□□□ -1.81
LINC01961-201ENST00000449954 FA2HQ7L5A8 372 aa3.75□□□□□ -1.81
LINC01961-201ENST00000449954 ARL17AQ8IVW1 177 aa3.75□□□□□ -1.81
LINC01961-201ENST00000449954 SMIM7Q9BQ49 75 aa3.75□□□□□ -1.81
LINC01961-201ENST00000449954 A0A1B0GXF2 115 aa3.74□□□□□ -1.81
LINC01961-201ENST00000449954 LINC00587B1AMM8 73 aa3.74□□□□□ -1.81
LINC01961-201ENST00000449954 AKR1D1P51857 326 aa3.74□□□□□ -1.81
LINC01961-201ENST00000449954 MAP1LC3CQ9BXW4 147 aa3.74□□□□□ -1.81
LINC01961-201ENST00000449954 CST9LQ9H4G1 147 aa3.74□□□□□ -1.81
LINC01961-201ENST00000449954 TRBV10-2A0A0K0K1G8 114 aa3.73□□□□□ -1.81
LINC01961-201ENST00000449954 LINC01549A6NIU2 74 aa3.73□□□□□ -1.81
LINC01961-201ENST00000449954 COX19Q49B96 90 aa3.73□□□□□ -1.81
LINC01961-201ENST00000449954 MRPL54Q6P161 138 aaKnown RBP3.73□□□□□ -1.81
LINC01961-201ENST00000449954 SCGB3A1Q96QR1 104 aa3.73□□□□□ -1.81
LINC01961-201ENST00000449954 NXT2Q9NPJ8 142 aaKnown RBP3.73□□□□□ -1.81
LINC01961-201ENST00000449954 MTURNQ8N3F0 131 aa3.72□□□□□ -1.81
LINC01961-201ENST00000449954 LINC00614P0C842 121 aa3.71□□□□□ -1.82
LINC01961-201ENST00000449954 IGFL1Q6UW32 110 aa3.71□□□□□ -1.82
LINC01961-201ENST00000449954 Q96NJ1 140 aa3.71□□□□□ -1.82
LINC01961-201ENST00000449954 TRAV23DV6A0A075B6W5 121 aa3.7□□□□□ -1.82
LINC01961-201ENST00000449954 A8MUU9 505 aa3.7□□□□□ -1.82
LINC01961-201ENST00000449954 IGLC3P0DOY3 106 aa3.7□□□□□ -1.82
LINC01961-201ENST00000449954 HRES1P13985 223 aa3.7□□□□□ -1.82
LINC01961-201ENST00000449954 ZNF22P17026 224 aaPredicted RBP3.7□□□□□ -1.82
LINC01961-201ENST00000449954 HINT1P49773 126 aaPredicted RBP3.7□□□□□ -1.82
LINC01961-201ENST00000449954 ATP5L2Q7Z4Y8 100 aa3.7□□□□□ -1.82
LINC01961-201ENST00000449954 MIR7-3HGQ8N6C7 128 aa3.7□□□□□ -1.82
LINC01961-201ENST00000449954 ZNF73O43830 326 aaPredicted RBP3.69□□□□□ -1.82
LINC01961-201ENST00000449954 SMIM13P0DJ93 91 aa3.69□□□□□ -1.82
LINC01961-201ENST00000449954 ADCYAP1P18509 176 aa3.69□□□□□ -1.82
LINC01961-201ENST00000449954 UQCC3Q6UW78 93 aa3.69□□□□□ -1.82
LINC01961-201ENST00000449954 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms