RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 FAM19A5Q7Z5A7 132 aaPredicted RBP11.19□□□□□ -0.62
SMC6-206ENST00000446852 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.18□□□□□ -0.62
SMC6-206ENST00000446852 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.18□□□□□ -0.62
SMC6-206ENST00000446852 FBN3Q75N90 2809 aa11.18□□□□□ -0.62
SMC6-206ENST00000446852 IGLV1-50A0A075B6I6 118 aa11.17□□□□□ -0.62
SMC6-206ENST00000446852 A0A096LNI7 61 aa11.17□□□□□ -0.62
SMC6-206ENST00000446852 Q6ZRN7 208 aaPredicted RBP11.16□□□□□ -0.62
SMC6-206ENST00000446852 LRCOL1A6NCL2 159 aa11.16□□□□□ -0.62
SMC6-206ENST00000446852 MRPL55Q7Z7F7 128 aaKnown RBP11.15□□□□□ -0.62
SMC6-206ENST00000446852 CCKP06307 115 aa11.15□□□□□ -0.62
SMC6-206ENST00000446852 C14orf177Q52M58 125 aa11.15□□□□□ -0.62
SMC6-206ENST00000446852 LAMTOR3Q9UHA4 124 aa11.15□□□□□ -0.62
SMC6-206ENST00000446852 KRTAP4-16G5E9R7 235 aaPredicted RBP11.14□□□□□ -0.63
SMC6-206ENST00000446852 IGKV2-24A0A0C4DH68 120 aa11.14□□□□□ -0.63
SMC6-206ENST00000446852 C16orf90A8MZG2 172 aa11.14□□□□□ -0.63
SMC6-206ENST00000446852 PRYO14603 147 aa11.13□□□□□ -0.63
SMC6-206ENST00000446852 LINC00846Q9NV44 126 aa11.13□□□□□ -0.63
SMC6-206ENST00000446852 KMT2AQ03164 3969 aa11.13□□□□□ -0.63
SMC6-206ENST00000446852 H3BQ85 93 aa11.12□□□□□ -0.63
SMC6-206ENST00000446852 M0R2N4 97 aa11.12□□□□□ -0.63
SMC6-206ENST00000446852 SPRR1AP35321 89 aa11.12□□□□□ -0.63
SMC6-206ENST00000446852 RBM3P98179 157 aaKnown RBP11.12□□□□□ -0.63
SMC6-206ENST00000446852 LINC00643Q86TS7 51 aa11.12□□□□□ -0.63
SMC6-206ENST00000446852 TGP01266 2768 aa11.12□□□□□ -0.63
SMC6-206ENST00000446852 B5MCH6 92 aa11.1□□□□□ -0.63
SMC6-206ENST00000446852 Q6Q795 121 aa11.1□□□□□ -0.63
SMC6-206ENST00000446852 Q6ZRX8 168 aa11.1□□□□□ -0.63
SMC6-206ENST00000446852 A0A1W2PNN7 141 aa11.1□□□□□ -0.63
SMC6-206ENST00000446852 DNAH2Q9P225 4427 aa11.09□□□□□ -0.63
SMC6-206ENST00000446852 TRBV7-7A0A0K0K1E9 115 aa11.09□□□□□ -0.63
SMC6-206ENST00000446852 Q6ZQT0 140 aa11.09□□□□□ -0.63
SMC6-206ENST00000446852 Q9BRP9 147 aa11.09□□□□□ -0.63
SMC6-206ENST00000446852 LOC110117498A0A087WWA1 95 aa11.08□□□□□ -0.64
SMC6-206ENST00000446852 ETDCA0A1B0GVM5 59 aa11.08□□□□□ -0.64
SMC6-206ENST00000446852 CHTF8P0CG12 524 aa11.08□□□□□ -0.64
SMC6-206ENST00000446852 GHRHP01286 108 aa11.07□□□□□ -0.64
SMC6-206ENST00000446852 C9orf163Q8N9P6 203 aa11.07□□□□□ -0.64
SMC6-206ENST00000446852 NDUFV3P56181 108 aaKnown RBP11.06□□□□□ -0.64
SMC6-206ENST00000446852 DSCR8Q96T75 97 aa11.05□□□□□ -0.64
SMC6-206ENST00000446852 DHRS4-AS1Q9P1J3 65 aa11.05□□□□□ -0.64
SMC6-206ENST00000446852 HECTD4Q9Y4D8 3996 aa11.05□□□□□ -0.64
SMC6-206ENST00000446852 KRTAP21-3Q3LHN1 58 aa11.04□□□□□ -0.64
SMC6-206ENST00000446852 REG3GQ6UW15 175 aa11.04□□□□□ -0.64
SMC6-206ENST00000446852 LINC01547P58512 204 aaPredicted RBP11.03□□□□□ -0.64
SMC6-206ENST00000446852 TRBV7-4A0A0J9YYF1 115 aa11.02□□□□□ -0.64
SMC6-206ENST00000446852 Q6ZR54 194 aa11.02□□□□□ -0.65
SMC6-206ENST00000446852 Q8N377 158 aa11.02□□□□□ -0.65
SMC6-206ENST00000446852 DEFB105AQ8NG35 78 aa11.02□□□□□ -0.65
SMC6-206ENST00000446852 IMUPQ9GZP8 106 aa11.01□□□□□ -0.65
SMC6-206ENST00000446852 ERC2-IT1O76042 136 aa11□□□□□ -0.65
SMC6-206ENST00000446852 Q6JHZ5 121 aa10.99□□□□□ -0.65
SMC6-206ENST00000446852 ST20-AS1Q8NBB2 130 aa10.99□□□□□ -0.65
SMC6-206ENST00000446852 A0A087WTM6 91 aa10.99□□□□□ -0.65
SMC6-206ENST00000446852 PANO1I0J062 215 aa10.99□□□□□ -0.65
SMC6-206ENST00000446852 PDE6GP18545 87 aa10.99□□□□□ -0.65
SMC6-206ENST00000446852 IGKV3D-7A0A0C4DH55 119 aa10.98□□□□□ -0.65
SMC6-206ENST00000446852 UBE2BP63146 152 aa10.98□□□□□ -0.65
SMC6-206ENST00000446852 PHF5AQ7RTV0 110 aaKnown RBP10.98□□□□□ -0.65
SMC6-206ENST00000446852 KRTAP11-1Q8IUC1 163 aa10.98□□□□□ -0.65
SMC6-206ENST00000446852 DNAH17Q9UFH2 4485 aa10.97□□□□□ -0.65
SMC6-206ENST00000446852 C3orf22Q8N5N4 141 aa10.97□□□□□ -0.65
SMC6-206ENST00000446852 IGLV5-48A0A075B6I7 105 aa10.96□□□□□ -0.66
SMC6-206ENST00000446852 FUSP35637 526 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMC6-206ENST00000446852 ANAPC13Q9BS18 74 aa10.95□□□□□ -0.66
SMC6-206ENST00000446852 PKIGQ9Y2B9 76 aa10.95□□□□□ -0.66
SMC6-206ENST00000446852 PRLHP81277 87 aa10.95□□□□□ -0.66
SMC6-206ENST00000446852 DNAH6Q9C0G6 4158 aa10.94□□□□□ -0.66
SMC6-206ENST00000446852 FAM19A1Q7Z5A9 133 aa10.94□□□□□ -0.66
SMC6-206ENST00000446852 UBL5Q9BZL1 73 aa10.94□□□□□ -0.66
SMC6-206ENST00000446852 FAM236AA0A1B0GUQ0 79 aa10.93□□□□□ -0.66
SMC6-206ENST00000446852 FAM236BA0A1B0GV22 79 aa10.93□□□□□ -0.66
SMC6-206ENST00000446852 LINC00474Q9P2X8 69 aa10.93□□□□□ -0.66
SMC6-206ENST00000446852 SRRM2Q9UQ35 2752 aaKnown RBP10.93□□□□□ -0.66
SMC6-206ENST00000446852 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.92□□□□□ -0.66
SMC6-206ENST00000446852 LY6G6CO95867 125 aa10.91□□□□□ -0.66
SMC6-206ENST00000446852 SPACA4Q8TDM5 124 aa10.9□□□□□ -0.66
SMC6-206ENST00000446852 TNP2Q05952 138 aa10.9□□□□□ -0.67
SMC6-206ENST00000446852 Q6ZVQ6 151 aa10.89□□□□□ -0.67
SMC6-206ENST00000446852 RTL8CO15255 209 aa10.89□□□□□ -0.67
SMC6-206ENST00000446852 C1orf134Q5TEV5 83 aa10.88□□□□□ -0.67
SMC6-206ENST00000446852 ATP5EP2Q5VTU8 51 aa10.88□□□□□ -0.67
SMC6-206ENST00000446852 A0A087WVE0 104 aa10.87□□□□□ -0.67
SMC6-206ENST00000446852 HIGD2AQ9BW72 106 aa10.87□□□□□ -0.67
SMC6-206ENST00000446852 FRAS1Q86XX4 4008 aa10.86□□□□□ -0.67
SMC6-206ENST00000446852 ALMS1Q8TCU4 4167 aa10.86□□□□□ -0.67
SMC6-206ENST00000446852 DPH3Q96FX2 82 aa10.86□□□□□ -0.67
SMC6-206ENST00000446852 WWC2-AS2Q96NR7 200 aa10.86□□□□□ -0.67
SMC6-206ENST00000446852 SMIM29Q86T20 159 aa10.86□□□□□ -0.67
SMC6-206ENST00000446852 LINC00476Q8WZB0 136 aa10.86□□□□□ -0.67
SMC6-206ENST00000446852 EPM2AB3EWF7 344 aa10.85□□□□□ -0.67
SMC6-206ENST00000446852 HIST1H4AP62805 103 aaKnown RBP10.85□□□□□ -0.67
SMC6-206ENST00000446852 H0Y9J4 135 aa10.83□□□□□ -0.68
SMC6-206ENST00000446852 HAMPP81172 84 aa10.82□□□□□ -0.68
SMC6-206ENST00000446852 DNAH8Q96JB1 4490 aa10.82□□□□□ -0.68
SMC6-206ENST00000446852 C1orf137Q5JT78 98 aa10.82□□□□□ -0.68
SMC6-206ENST00000446852 HYDINQ4G0P3 5121 aa10.81□□□□□ -0.68
SMC6-206ENST00000446852 A0A1W2PNM2 257 aa10.81□□□□□ -0.68
SMC6-206ENST00000446852 C3orf84H3BNL1 204 aa10.8□□□□□ -0.68
SMC6-206ENST00000446852 DNAH11Q96DT5 4516 aa10.79□□□□□ -0.68
SMC6-206ENST00000446852 IGLV5-52A0A0A0MRZ9 124 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms