RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 COL7A1Q02388 2944 aa8.43□□□□□ -1.06
CPSF4-206ENST00000441580 MT-ATP8P03928 68 aa8.43□□□□□ -1.06
CPSF4-206ENST00000441580 C9orf163Q8N9P6 203 aa8.43□□□□□ -1.06
CPSF4-206ENST00000441580 PCP4P48539 62 aa8.42□□□□□ -1.06
CPSF4-206ENST00000441580 Q6ZR54 194 aa8.42□□□□□ -1.06
CPSF4-206ENST00000441580 KRTAP7-1Q8IUC3 87 aa8.42□□□□□ -1.06
CPSF4-206ENST00000441580 LAMTOR3Q9UHA4 124 aa8.42□□□□□ -1.06
CPSF4-206ENST00000441580 LOC110117498A0A087WWA1 95 aa8.41□□□□□ -1.06
CPSF4-206ENST00000441580 IGKV2-24A0A0C4DH68 120 aa8.41□□□□□ -1.06
CPSF4-206ENST00000441580 KRTAP4-16G5E9R7 235 aaPredicted RBP8.41□□□□□ -1.06
CPSF4-206ENST00000441580 PDE6GP18545 87 aa8.41□□□□□ -1.06
CPSF4-206ENST00000441580 DNAH7Q8WXX0 4024 aa8.4□□□□□ -1.06
CPSF4-206ENST00000441580 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.06
CPSF4-206ENST00000441580 B5MCH6 92 aa8.4□□□□□ -1.06
CPSF4-206ENST00000441580 CCKP06307 115 aa8.4□□□□□ -1.06
CPSF4-206ENST00000441580 RBM3P98179 157 aaKnown RBP8.4□□□□□ -1.06
CPSF4-206ENST00000441580 REG3GQ6UW15 175 aa8.4□□□□□ -1.06
CPSF4-206ENST00000441580 SDIM1Q6ZPB5 146 aa8.4□□□□□ -1.06
CPSF4-206ENST00000441580 LINC00643Q86TS7 51 aa8.4□□□□□ -1.06
CPSF4-206ENST00000441580 WWC2-AS2Q96NR7 200 aa8.4□□□□□ -1.06
CPSF4-206ENST00000441580 PRKDCP78527 4128 aaKnown RBP8.39□□□□□ -1.07
CPSF4-206ENST00000441580 Q6Q795 121 aa8.39□□□□□ -1.07
CPSF4-206ENST00000441580 DNHD1Q96M86 4753 aa8.39□□□□□ -1.07
CPSF4-206ENST00000441580 A0A087WTM6 91 aa8.38□□□□□ -1.07
CPSF4-206ENST00000441580 M0R2N4 97 aa8.38□□□□□ -1.07
CPSF4-206ENST00000441580 DSCR8Q96T75 97 aa8.38□□□□□ -1.07
CPSF4-206ENST00000441580 A0A1B0GV72 72 aa8.37□□□□□ -1.07
CPSF4-206ENST00000441580 TRBV7-7A0A0K0K1E9 115 aa8.36□□□□□ -1.07
CPSF4-206ENST00000441580 Q6ZQT0 140 aa8.36□□□□□ -1.07
CPSF4-206ENST00000441580 A0A1W2PNN7 141 aa8.35□□□□□ -1.07
CPSF4-206ENST00000441580 NDUFV3P56181 108 aaKnown RBP8.35□□□□□ -1.07
CPSF4-206ENST00000441580 C1orf134Q5TEV5 83 aa8.35□□□□□ -1.07
CPSF4-206ENST00000441580 SMCR5Q8TEV8 140 aa8.35□□□□□ -1.07
CPSF4-206ENST00000441580 LINC00476Q8WZB0 136 aa8.35□□□□□ -1.07
CPSF4-206ENST00000441580 STARD9Q9P2P6 4700 aa8.34□□□□□ -1.07
CPSF4-206ENST00000441580 TRBV7-4A0A0J9YYF1 115 aa8.34□□□□□ -1.07
CPSF4-206ENST00000441580 ATP5EP2Q5VTU8 51 aa8.34□□□□□ -1.07
CPSF4-206ENST00000441580 Q9BRP9 147 aa8.34□□□□□ -1.07
CPSF4-206ENST00000441580 IMUPQ9GZP8 106 aa8.34□□□□□ -1.07
CPSF4-206ENST00000441580 PLECQ15149 4684 aaKnown RBP8.33□□□□□ -1.08
CPSF4-206ENST00000441580 MEGF8Q7Z7M0 2845 aa8.33□□□□□ -1.08
CPSF4-206ENST00000441580 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
CPSF4-206ENST00000441580 CHTF8P0CG12 524 aa8.33□□□□□ -1.08
CPSF4-206ENST00000441580 UBE2BP63146 152 aa8.33□□□□□ -1.08
CPSF4-206ENST00000441580 Q6JHZ5 121 aa8.33□□□□□ -1.08
CPSF4-206ENST00000441580 C3orf84H3BNL1 204 aa8.32□□□□□ -1.08
CPSF4-206ENST00000441580 LY6G6CO95867 125 aa8.32□□□□□ -1.08
CPSF4-206ENST00000441580 SPACA4Q8TDM5 124 aa8.32□□□□□ -1.08
CPSF4-206ENST00000441580 RTL8CO15255 209 aa8.31□□□□□ -1.08
CPSF4-206ENST00000441580 LINC00846Q9NV44 126 aa8.31□□□□□ -1.08
CPSF4-206ENST00000441580 VPS13DQ5THJ4 4388 aa8.31□□□□□ -1.08
CPSF4-206ENST00000441580 CSMD3Q7Z407 3707 aa8.3□□□□□ -1.08
CPSF4-206ENST00000441580 FAM19A1Q7Z5A9 133 aa8.3□□□□□ -1.08
CPSF4-206ENST00000441580 UBL5Q9BZL1 73 aa8.3□□□□□ -1.08
CPSF4-206ENST00000441580 H0Y9J4 135 aa8.29□□□□□ -1.08
CPSF4-206ENST00000441580 LINC01547P58512 204 aaPredicted RBP8.29□□□□□ -1.08
CPSF4-206ENST00000441580 EPM2AB3EWF7 344 aa8.28□□□□□ -1.08
CPSF4-206ENST00000441580 PHF5AQ7RTV0 110 aaKnown RBP8.28□□□□□ -1.08
CPSF4-206ENST00000441580 Q8N377 158 aa8.28□□□□□ -1.08
CPSF4-206ENST00000441580 DNAH6Q9C0G6 4158 aa8.26□□□□□ -1.09
CPSF4-206ENST00000441580 LYSTQ99698 3801 aa8.26□□□□□ -1.09
CPSF4-206ENST00000441580 ALMS1Q8TCU4 4167 aa8.26□□□□□ -1.09
CPSF4-206ENST00000441580 IGLV5-52A0A0A0MRZ9 124 aa8.26□□□□□ -1.09
CPSF4-206ENST00000441580 DEFB105AQ8NG35 78 aa8.26□□□□□ -1.09
CPSF4-206ENST00000441580 F8WEM9 126 aa8.25□□□□□ -1.09
CPSF4-206ENST00000441580 PRLHP81277 87 aa8.25□□□□□ -1.09
CPSF4-206ENST00000441580 A0A1B0GW54 56 aa8.24□□□□□ -1.09
CPSF4-206ENST00000441580 BCE1O60756 84 aa8.24□□□□□ -1.09
CPSF4-206ENST00000441580 UBE2AP49459 152 aa8.24□□□□□ -1.09
CPSF4-206ENST00000441580 TNP2Q05952 138 aa8.24□□□□□ -1.09
CPSF4-206ENST00000441580 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.24□□□□□ -1.09
CPSF4-206ENST00000441580 FBN3Q75N90 2809 aa8.23□□□□□ -1.09
CPSF4-206ENST00000441580 ERC2-IT1O76042 136 aa8.23□□□□□ -1.09
CPSF4-206ENST00000441580 ST20-AS1Q8NBB2 130 aa8.23□□□□□ -1.09
CPSF4-206ENST00000441580 DNAH10Q8IVF4 4471 aa8.23□□□□□ -1.09
CPSF4-206ENST00000441580 PANO1I0J062 215 aa8.22□□□□□ -1.09
CPSF4-206ENST00000441580 DPH3Q96FX2 82 aa8.22□□□□□ -1.09
CPSF4-206ENST00000441580 HIGD2AQ9BW72 106 aa8.22□□□□□ -1.09
CPSF4-206ENST00000441580 FUSP35637 526 aaKnown RBP eCLIP8.21□□□□□ -1.1
CPSF4-206ENST00000441580 PLAC8Q9NZF1 115 aa8.21□□□□□ -1.1
CPSF4-206ENST00000441580 Q6ZVQ6 151 aa8.2□□□□□ -1.1
CPSF4-206ENST00000441580 ANAPC13Q9BS18 74 aa8.2□□□□□ -1.1
CPSF4-206ENST00000441580 IGKV3D-7A0A0C4DH55 119 aa8.19□□□□□ -1.1
CPSF4-206ENST00000441580 FAM236AA0A1B0GUQ0 79 aa8.19□□□□□ -1.1
CPSF4-206ENST00000441580 FAM236BA0A1B0GV22 79 aa8.19□□□□□ -1.1
CPSF4-206ENST00000441580 SPRR1BP22528 89 aa8.19□□□□□ -1.1
CPSF4-206ENST00000441580 C1orf137Q5JT78 98 aa8.19□□□□□ -1.1
CPSF4-206ENST00000441580 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
CPSF4-206ENST00000441580 CXCL6P80162 114 aa8.18□□□□□ -1.1
CPSF4-206ENST00000441580 KRTAP13-1Q8IUC0 172 aa8.18□□□□□ -1.1
CPSF4-206ENST00000441580 C3orf22Q8N5N4 141 aa8.18□□□□□ -1.1
CPSF4-206ENST00000441580 Q8NBF4 154 aa8.18□□□□□ -1.1
CPSF4-206ENST00000441580 IGLV8-61A0A075B6I0 122 aa8.17□□□□□ -1.1
CPSF4-206ENST00000441580 SMIM29Q86T20 159 aa8.16□□□□□ -1.1
CPSF4-206ENST00000441580 HIST1H4AP62805 103 aaKnown RBP8.15□□□□□ -1.1
CPSF4-206ENST00000441580 ZNF706Q9Y5V0 76 aaPredicted RBP8.15□□□□□ -1.1
CPSF4-206ENST00000441580 TENM2Q9NT68 2774 aa8.15□□□□□ -1.11
CPSF4-206ENST00000441580 ATOX1O00244 68 aa8.13□□□□□ -1.11
CPSF4-206ENST00000441580 SPRR4Q96PI1 79 aa8.13□□□□□ -1.11
CPSF4-206ENST00000441580 A0A1W2PNM2 257 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms