RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 KCNQ1DNQ9H478 68 aa12.37□□□□□ -0.43
CHRNA7-202ENST00000437966 IGLV5-52A0A0A0MRZ9 124 aa12.36□□□□□ -0.43
CHRNA7-202ENST00000437966 BAALC-AS2P0C853 105 aa12.36□□□□□ -0.43
CHRNA7-202ENST00000437966 COX7BP24311 80 aa12.36□□□□□ -0.43
CHRNA7-202ENST00000437966 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.36□□□□□ -0.43
CHRNA7-202ENST00000437966 DNAL4O96015 105 aa12.35□□□□□ -0.43
CHRNA7-202ENST00000437966 PHF5AQ7RTV0 110 aaKnown RBP12.34□□□□□ -0.43
CHRNA7-202ENST00000437966 FAT2Q9NYQ8 4349 aa12.34□□□□□ -0.43
CHRNA7-202ENST00000437966 H3BT86 120 aa12.33□□□□□ -0.44
CHRNA7-202ENST00000437966 ELOF1P60002 83 aaKnown RBP12.33□□□□□ -0.44
CHRNA7-202ENST00000437966 OCIAD2Q56VL3 154 aa12.33□□□□□ -0.44
CHRNA7-202ENST00000437966 hADV29S1A0JD25 119 aa12.32□□□□□ -0.44
CHRNA7-202ENST00000437966 KRTAP10-2P60368 255 aa12.32□□□□□ -0.44
CHRNA7-202ENST00000437966 PKIGQ9Y2B9 76 aa12.32□□□□□ -0.44
CHRNA7-202ENST00000437966 TEN1Q86WV5 123 aa12.31□□□□□ -0.44
CHRNA7-202ENST00000437966 CBY1Q9Y3M2 126 aa12.31□□□□□ -0.44
CHRNA7-202ENST00000437966 DNAH5Q8TE73 4624 aa12.3□□□□□ -0.44
CHRNA7-202ENST00000437966 TRBV7-6A0A0J9YX20 115 aa12.3□□□□□ -0.44
CHRNA7-202ENST00000437966 LCE6AA0A183 80 aa12.3□□□□□ -0.44
CHRNA7-202ENST00000437966 PRYO14603 147 aa12.3□□□□□ -0.44
CHRNA7-202ENST00000437966 KRTAP11-1Q8IUC1 163 aa12.3□□□□□ -0.44
CHRNA7-202ENST00000437966 SPACA4Q8TDM5 124 aa12.3□□□□□ -0.44
CHRNA7-202ENST00000437966 LINC01600Q96MT4 127 aa12.3□□□□□ -0.44
CHRNA7-202ENST00000437966 LINC00474Q9P2X8 69 aa12.3□□□□□ -0.44
CHRNA7-202ENST00000437966 PKD1P98161 4303 aa12.29□□□□□ -0.44
CHRNA7-202ENST00000437966 TEX49A0A1B0GTD5 131 aa12.28□□□□□ -0.44
CHRNA7-202ENST00000437966 A0A1B0GX51 115 aa12.28□□□□□ -0.44
CHRNA7-202ENST00000437966 LINC00528Q8N1L1 170 aa12.28□□□□□ -0.44
CHRNA7-202ENST00000437966 ORMDL1Q9P0S3 153 aa12.27□□□□□ -0.45
CHRNA7-202ENST00000437966 KRTAP4-16G5E9R7 235 aaPredicted RBP12.26□□□□□ -0.45
CHRNA7-202ENST00000437966 SPRR1AP35321 89 aa12.26□□□□□ -0.45
CHRNA7-202ENST00000437966 REG3GQ6UW15 175 aa12.26□□□□□ -0.45
CHRNA7-202ENST00000437966 ETDCA0A1B0GVM5 59 aa12.25□□□□□ -0.45
CHRNA7-202ENST00000437966 B5MCH6 92 aa12.25□□□□□ -0.45
CHRNA7-202ENST00000437966 SNCGO76070 127 aa12.25□□□□□ -0.45
CHRNA7-202ENST00000437966 UBE2BP63146 152 aa12.25□□□□□ -0.45
CHRNA7-202ENST00000437966 Q6ZQY7 126 aa12.25□□□□□ -0.45
CHRNA7-202ENST00000437966 PPDPFLQ8WWR9 84 aa12.24□□□□□ -0.45
CHRNA7-202ENST00000437966 A0A1B0GV72 72 aa12.23□□□□□ -0.45
CHRNA7-202ENST00000437966 DNAH8Q96JB1 4490 aa12.22□□□□□ -0.45
CHRNA7-202ENST00000437966 Q6ZRX8 168 aa12.21□□□□□ -0.45
CHRNA7-202ENST00000437966 Q9BRP9 147 aa12.21□□□□□ -0.45
CHRNA7-202ENST00000437966 RYR2Q92736 4967 aa12.21□□□□□ -0.46
CHRNA7-202ENST00000437966 K7ERU9 68 aa12.2□□□□□ -0.46
CHRNA7-202ENST00000437966 FAM19A1Q7Z5A9 133 aa12.18□□□□□ -0.46
CHRNA7-202ENST00000437966 EPM2AB3EWF7 344 aa12.18□□□□□ -0.46
CHRNA7-202ENST00000437966 FAM30AQ9NZY2 134 aa12.18□□□□□ -0.46
CHRNA7-202ENST00000437966 PRLHP81277 87 aa12.17□□□□□ -0.46
CHRNA7-202ENST00000437966 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.17□□□□□ -0.46
CHRNA7-202ENST00000437966 TMEM256-PLSCR3K7ERE1 68 aa12.16□□□□□ -0.46
CHRNA7-202ENST00000437966 ERC2-IT1O76042 136 aa12.16□□□□□ -0.46
CHRNA7-202ENST00000437966 INAFM2P0DMQ5 153 aa12.16□□□□□ -0.46
CHRNA7-202ENST00000437966 KMT2CQ8NEZ4 4911 aaKnown RBP12.15□□□□□ -0.46
CHRNA7-202ENST00000437966 KRTAP10-1P60331 282 aa12.15□□□□□ -0.46
CHRNA7-202ENST00000437966 DEFB105AQ8NG35 78 aa12.15□□□□□ -0.46
CHRNA7-202ENST00000437966 PLAC8Q9NZF1 115 aa12.15□□□□□ -0.46
CHRNA7-202ENST00000437966 DHRS4-AS1Q9P1J3 65 aa12.15□□□□□ -0.46
CHRNA7-202ENST00000437966 ST20-AS1Q8NBB2 130 aa12.14□□□□□ -0.47
CHRNA7-202ENST00000437966 SMCR5Q8TEV8 140 aa12.13□□□□□ -0.47
CHRNA7-202ENST00000437966 J3QR89 54 aa12.12□□□□□ -0.47
CHRNA7-202ENST00000437966 HAMPP81172 84 aa12.12□□□□□ -0.47
CHRNA7-202ENST00000437966 C14orf132Q9NPU4 83 aa12.11□□□□□ -0.47
CHRNA7-202ENST00000437966 LAMTOR3Q9UHA4 124 aa12.1□□□□□ -0.47
CHRNA7-202ENST00000437966 OBSCN-AS1Q96MR7 158 aa12.1□□□□□ -0.47
CHRNA7-202ENST00000437966 HIGD2AQ9BW72 106 aa12.09□□□□□ -0.47
CHRNA7-202ENST00000437966 LINC01547P58512 204 aaPredicted RBP12.07□□□□□ -0.48
CHRNA7-202ENST00000437966 Q8N377 158 aa12.07□□□□□ -0.48
CHRNA7-202ENST00000437966 CIRBP-AS1Q8TBR5 109 aa12.07□□□□□ -0.48
CHRNA7-202ENST00000437966 BCE1O60756 84 aa12.07□□□□□ -0.48
CHRNA7-202ENST00000437966 UBE2AP49459 152 aa12.07□□□□□ -0.48
CHRNA7-202ENST00000437966 PSORS1C2Q9UIG4 136 aa12.05□□□□□ -0.48
CHRNA7-202ENST00000437966 LINC00336Q6ZUF6 198 aa12.05□□□□□ -0.48
CHRNA7-202ENST00000437966 SCXQ7RTU7 201 aa12.04□□□□□ -0.48
CHRNA7-202ENST00000437966 C3orf22Q8N5N4 141 aa12.04□□□□□ -0.48
CHRNA7-202ENST00000437966 VPS25Q9BRG1 176 aa12.04□□□□□ -0.48
CHRNA7-202ENST00000437966 H3BQ85 93 aa12.03□□□□□ -0.48
CHRNA7-202ENST00000437966 NDUFV3P56181 108 aaKnown RBP12.03□□□□□ -0.48
CHRNA7-202ENST00000437966 JMJD7-PLA2G4BH0Y9G9 81 aa12.02□□□□□ -0.48
CHRNA7-202ENST00000437966 GAGE2AQ6NT46 116 aa12.02□□□□□ -0.49
CHRNA7-202ENST00000437966 Q6ZSA8 131 aa12.02□□□□□ -0.49
CHRNA7-202ENST00000437966 GHRHP01286 108 aa12.01□□□□□ -0.49
CHRNA7-202ENST00000437966 RBM3P98179 157 aaKnown RBP12.01□□□□□ -0.49
CHRNA7-202ENST00000437966 C1orf137Q5JT78 98 aa12.01□□□□□ -0.49
CHRNA7-202ENST00000437966 SRRM2Q9UQ35 2752 aaKnown RBP12.01□□□□□ -0.49
CHRNA7-202ENST00000437966 PKHD1P08F94 4074 aa12.01□□□□□ -0.49
CHRNA7-202ENST00000437966 KRTAP13-1Q8IUC0 172 aa12□□□□□ -0.49
CHRNA7-202ENST00000437966 H0Y9J4 135 aa12□□□□□ -0.49
CHRNA7-202ENST00000437966 IGLV5-48A0A075B6I7 105 aa11.99□□□□□ -0.49
CHRNA7-202ENST00000437966 A0A1B0GVY2 172 aa11.99□□□□□ -0.49
CHRNA7-202ENST00000437966 CDIP1Q9H305 208 aa11.98□□□□□ -0.49
CHRNA7-202ENST00000437966 LRP1BQ9NZR2 4599 aa11.97□□□□□ -0.49
CHRNA7-202ENST00000437966 DYNC1H1Q14204 4646 aaKnown RBP11.97□□□□□ -0.49
CHRNA7-202ENST00000437966 RYR3Q15413 4870 aa11.94□□□□□ -0.5
CHRNA7-202ENST00000437966 CCKP06307 115 aa11.94□□□□□ -0.5
CHRNA7-202ENST00000437966 SMIM29Q86T20 159 aa11.94□□□□□ -0.5
CHRNA7-202ENST00000437966 DSCR8Q96T75 97 aa11.94□□□□□ -0.5
CHRNA7-202ENST00000437966 Q6ZQT0 140 aa11.93□□□□□ -0.5
CHRNA7-202ENST00000437966 LOC110117498A0A087WWA1 95 aa11.9□□□□□ -0.5
CHRNA7-202ENST00000437966 FAM240AA0A1B0GVK7 77 aa11.9□□□□□ -0.51
CHRNA7-202ENST00000437966 TRBV7-4A0A0J9YYF1 115 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms