RNA–Protein interactions for RNA: ENST00000436769.5

COL6A2-206, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-206ENST00000436769 SEC61BP60468 96 aaKnown RBP11.23□□□□□ -0.61
COL6A2-206ENST00000436769 HERVK_113P61574 105 aa11.23□□□□□ -0.61
COL6A2-206ENST00000436769 S100A7L2Q5SY68 101 aa11.23□□□□□ -0.61
COL6A2-206ENST00000436769 ADAMTSL4-AS1Q5T5F5 129 aa11.23□□□□□ -0.61
COL6A2-206ENST00000436769 HSPB8Q9UJY1 196 aa11.23□□□□□ -0.61
COL6A2-206ENST00000436769 TRAV23DV6A0A075B6W5 121 aa11.22□□□□□ -0.61
COL6A2-206ENST00000436769 A0A0J9YXY3 114 aa11.2□□□□□ -0.62
COL6A2-206ENST00000436769 ZNF73O43830 326 aaPredicted RBP11.2□□□□□ -0.62
COL6A2-206ENST00000436769 JOSD1Q15040 202 aaPredicted RBP11.2□□□□□ -0.62
COL6A2-206ENST00000436769 ST20-AS1Q8NBB2 130 aa11.2□□□□□ -0.62
COL6A2-206ENST00000436769 NPC2P61916 151 aa11.19□□□□□ -0.62
COL6A2-206ENST00000436769 XP32Q5T750 250 aa11.19□□□□□ -0.62
COL6A2-206ENST00000436769 LINC01547P58512 204 aaPredicted RBP11.17□□□□□ -0.62
COL6A2-206ENST00000436769 E9PLD3 99 aa11.16□□□□□ -0.62
COL6A2-206ENST00000436769 C9orf153Q5TBE3 101 aa11.16□□□□□ -0.62
COL6A2-206ENST00000436769 C5orf52A6NGY3 159 aa11.15□□□□□ -0.62
COL6A2-206ENST00000436769 COLCA2A8K830 154 aa11.14□□□□□ -0.63
COL6A2-206ENST00000436769 LITAFQ99732 161 aa11.13□□□□□ -0.63
COL6A2-206ENST00000436769 SPRR1BP22528 89 aa11.12□□□□□ -0.63
COL6A2-206ENST00000436769 LINC00308Q8TCZ7 52 aa11.11□□□□□ -0.63
COL6A2-206ENST00000436769 S100A1P23297 94 aa11.1□□□□□ -0.63
COL6A2-206ENST00000436769 HINT1P49773 126 aaPredicted RBP11.09□□□□□ -0.63
COL6A2-206ENST00000436769 LCE2CQ5TA81 110 aa11.09□□□□□ -0.63
COL6A2-206ENST00000436769 SPANXCQ9NY87 97 aa11.09□□□□□ -0.63
COL6A2-206ENST00000436769 FSIP2Q5CZC0 6907 aa11.09□□□□□ -0.63
COL6A2-206ENST00000436769 CBY1Q9Y3M2 126 aa11.08□□□□□ -0.64
COL6A2-206ENST00000436769 SYS1-DBNDD2H3BUS1 97 aa11.07□□□□□ -0.64
COL6A2-206ENST00000436769 TIMM17BO60830 172 aa11.06□□□□□ -0.64
COL6A2-206ENST00000436769 LCE2DQ5TA82 110 aaPredicted RBP11.06□□□□□ -0.64
COL6A2-206ENST00000436769 OR13C6PQ8NH95 151 aa11.05□□□□□ -0.64
COL6A2-206ENST00000436769 DHRS4-AS1Q9P1J3 65 aa11.05□□□□□ -0.64
COL6A2-206ENST00000436769 KRTAP19-2Q3LHN2 52 aa11.04□□□□□ -0.64
COL6A2-206ENST00000436769 HRCT1Q6UXD1 115 aa11.03□□□□□ -0.64
COL6A2-206ENST00000436769 SPANXDQ9BXN6 97 aa11.03□□□□□ -0.64
COL6A2-206ENST00000436769 LINC01545Q5VT33 79 aa11.02□□□□□ -0.65
COL6A2-206ENST00000436769 SLC25A34Q6PIV7 304 aa11.02□□□□□ -0.65
COL6A2-206ENST00000436769 ELOF1P60002 83 aaKnown RBP11.01□□□□□ -0.65
COL6A2-206ENST00000436769 LIMD2Q9BT23 127 aa11.01□□□□□ -0.65
COL6A2-206ENST00000436769 TTTY13Q9BZ97 58 aa11□□□□□ -0.65
COL6A2-206ENST00000436769 LAMTOR3Q9UHA4 124 aa11□□□□□ -0.65
COL6A2-206ENST00000436769 ZNF815PA8K554 130 aa10.99□□□□□ -0.65
COL6A2-206ENST00000436769 HIST1H2BKO60814 126 aa10.99□□□□□ -0.65
COL6A2-206ENST00000436769 HIST1H2BJP06899 126 aa10.99□□□□□ -0.65
COL6A2-206ENST00000436769 HIST1H2BOP23527 126 aa10.99□□□□□ -0.65
COL6A2-206ENST00000436769 COX7BP24311 80 aa10.99□□□□□ -0.65
COL6A2-206ENST00000436769 HIST1H2BBP33778 126 aa10.99□□□□□ -0.65
COL6A2-206ENST00000436769 HIST1H2BDP58876 126 aa10.99□□□□□ -0.65
COL6A2-206ENST00000436769 HIST1H2BCP62807 126 aa10.99□□□□□ -0.65
COL6A2-206ENST00000436769 HIST2H2BEQ16778 126 aa10.99□□□□□ -0.65
COL6A2-206ENST00000436769 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.99□□□□□ -0.65
COL6A2-206ENST00000436769 HIST1H2BHQ93079 126 aa10.99□□□□□ -0.65
COL6A2-206ENST00000436769 HIST1H2BNQ99877 126 aa10.99□□□□□ -0.65
COL6A2-206ENST00000436769 HIST1H2BMQ99879 126 aa10.99□□□□□ -0.65
COL6A2-206ENST00000436769 C6orf99Q4VX62 202 aa10.98□□□□□ -0.65
COL6A2-206ENST00000436769 PCOTHQ58A44 107 aa10.98□□□□□ -0.65
COL6A2-206ENST00000436769 PET117Q6UWS5 81 aa10.98□□□□□ -0.65
COL6A2-206ENST00000436769 C9orf92A6NGG3 77 aa10.97□□□□□ -0.65
COL6A2-206ENST00000436769 LINC00518Q8N0U6 118 aa10.97□□□□□ -0.65
COL6A2-206ENST00000436769 CD164Q04900 197 aa10.95□□□□□ -0.66
COL6A2-206ENST00000436769 TAL2Q16559 108 aa10.94□□□□□ -0.66
COL6A2-206ENST00000436769 Q1RN00 199 aa10.94□□□□□ -0.66
COL6A2-206ENST00000436769 SMIM29Q86T20 159 aa10.94□□□□□ -0.66
COL6A2-206ENST00000436769 DEFB105AQ8NG35 78 aa10.94□□□□□ -0.66
COL6A2-206ENST00000436769 IGLV8-61A0A075B6I0 122 aa10.93□□□□□ -0.66
COL6A2-206ENST00000436769 TEX49A0A1B0GTD5 131 aa10.93□□□□□ -0.66
COL6A2-206ENST00000436769 MT1HP80294 61 aa10.93□□□□□ -0.66
COL6A2-206ENST00000436769 PRO1933Q9H354 126 aa10.93□□□□□ -0.66
COL6A2-206ENST00000436769 TRBV7-6A0A0J9YX20 115 aa10.92□□□□□ -0.66
COL6A2-206ENST00000436769 C3orf79P0CE67 100 aa10.92□□□□□ -0.66
COL6A2-206ENST00000436769 Q5XG85 94 aa10.91□□□□□ -0.66
COL6A2-206ENST00000436769 H7C2G1 150 aa10.89□□□□□ -0.67
COL6A2-206ENST00000436769 IGLV5-48A0A075B6I7 105 aa10.88□□□□□ -0.67
COL6A2-206ENST00000436769 AKR1D1P51857 326 aa10.87□□□□□ -0.67
COL6A2-206ENST00000436769 C1orf195Q5TG92 126 aa10.87□□□□□ -0.67
COL6A2-206ENST00000436769 CRCT1Q9UGL9 99 aa10.87□□□□□ -0.67
COL6A2-206ENST00000436769 FLGP20930 4061 aaPredicted RBP10.86□□□□□ -0.67
COL6A2-206ENST00000436769 A0A0G2JQZ4 141 aa10.86□□□□□ -0.67
COL6A2-206ENST00000436769 A0A1B0GWB2 263 aa10.86□□□□□ -0.67
COL6A2-206ENST00000436769 ANKRD39Q53RE8 183 aa10.85□□□□□ -0.67
COL6A2-206ENST00000436769 SCGB1D4Q6XE38 83 aa10.85□□□□□ -0.67
COL6A2-206ENST00000436769 IFITM1P13164 125 aa10.84□□□□□ -0.67
COL6A2-206ENST00000436769 COA6Q5JTJ3 125 aaKnown RBP10.84□□□□□ -0.67
COL6A2-206ENST00000436769 KRTDAPP60985 99 aa10.83□□□□□ -0.68
COL6A2-206ENST00000436769 A6NDN8 102 aa10.82□□□□□ -0.68
COL6A2-206ENST00000436769 MUSTN1Q8IVN3 82 aa10.82□□□□□ -0.68
COL6A2-206ENST00000436769 Q6ZVH6 145 aa10.81□□□□□ -0.68
COL6A2-206ENST00000436769 COPS9Q8WXC6 57 aa10.81□□□□□ -0.68
COL6A2-206ENST00000436769 CFC1BP0CG36 223 aa10.79□□□□□ -0.68
COL6A2-206ENST00000436769 PCP2Q8IVA1 136 aa10.79□□□□□ -0.68
COL6A2-206ENST00000436769 A4D1N5 150 aa10.78□□□□□ -0.68
COL6A2-206ENST00000436769 LORP23490 312 aaPredicted RBP10.78□□□□□ -0.68
COL6A2-206ENST00000436769 RPL37P61927 97 aaKnown RBP10.77□□□□□ -0.69
COL6A2-206ENST00000436769 ATOH7Q8N100 152 aa10.77□□□□□ -0.69
COL6A2-206ENST00000436769 SMIM11BQ8TCY0 68 aa10.76□□□□□ -0.69
COL6A2-206ENST00000436769 KRTAP10-6P60371 365 aaPredicted RBP10.75□□□□□ -0.69
COL6A2-206ENST00000436769 TRAV13-2A0A0B4J235 113 aa10.74□□□□□ -0.69
COL6A2-206ENST00000436769 C20orf202A1L168 122 aa10.74□□□□□ -0.69
COL6A2-206ENST00000436769 NHP2Q9NX24 153 aaKnown RBP10.73□□□□□ -0.69
COL6A2-206ENST00000436769 TCL1BO95988 128 aa10.7□□□□□ -0.7
COL6A2-206ENST00000436769 LINC00575Q6W349 94 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms