RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 FSIP2Q5CZC0 6907 aa8.17□□□□□ -1.1
PRKDC-203ENST00000432581 H0Y8G0 127 aa8.16□□□□□ -1.1
PRKDC-203ENST00000432581 PLNP26678 52 aa8.16□□□□□ -1.1
PRKDC-203ENST00000432581 NMUP48645 174 aa8.16□□□□□ -1.1
PRKDC-203ENST00000432581 J3QQQ9 107 aa8.15□□□□□ -1.1
PRKDC-203ENST00000432581 ZNF73O43830 326 aaPredicted RBP8.15□□□□□ -1.1
PRKDC-203ENST00000432581 LIMD2Q9BT23 127 aa8.15□□□□□ -1.1
PRKDC-203ENST00000432581 CFC1BP0CG36 223 aa8.14□□□□□ -1.11
PRKDC-203ENST00000432581 HERVK_113P61574 105 aa8.14□□□□□ -1.11
PRKDC-203ENST00000432581 KRTAP19-2Q3LHN2 52 aa8.14□□□□□ -1.11
PRKDC-203ENST00000432581 ST20-AS1Q8NBB2 130 aa8.14□□□□□ -1.11
PRKDC-203ENST00000432581 CBY1Q9Y3M2 126 aa8.14□□□□□ -1.11
PRKDC-203ENST00000432581 HIST1H2BKO60814 126 aa8.13□□□□□ -1.11
PRKDC-203ENST00000432581 HIST1H2BJP06899 126 aa8.13□□□□□ -1.11
PRKDC-203ENST00000432581 LGALS3P17931 250 aaKnown RBP8.13□□□□□ -1.11
PRKDC-203ENST00000432581 HIST1H2BOP23527 126 aa8.13□□□□□ -1.11
PRKDC-203ENST00000432581 HIST1H2BBP33778 126 aa8.13□□□□□ -1.11
PRKDC-203ENST00000432581 HINT1P49773 126 aaPredicted RBP8.13□□□□□ -1.11
PRKDC-203ENST00000432581 HIST1H2BDP58876 126 aa8.13□□□□□ -1.11
PRKDC-203ENST00000432581 HIST1H2BCP62807 126 aa8.13□□□□□ -1.11
PRKDC-203ENST00000432581 HIST2H2BEQ16778 126 aa8.13□□□□□ -1.11
PRKDC-203ENST00000432581 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.13□□□□□ -1.11
PRKDC-203ENST00000432581 HIST1H2BHQ93079 126 aa8.13□□□□□ -1.11
PRKDC-203ENST00000432581 HIST1H2BNQ99877 126 aa8.13□□□□□ -1.11
PRKDC-203ENST00000432581 HIST1H2BMQ99879 126 aa8.13□□□□□ -1.11
PRKDC-203ENST00000432581 LEPROTL1O95214 131 aa8.12□□□□□ -1.11
PRKDC-203ENST00000432581 MT1HP80294 61 aa8.12□□□□□ -1.11
PRKDC-203ENST00000432581 PCOTHQ58A44 107 aa8.12□□□□□ -1.11
PRKDC-203ENST00000432581 SLC25A34Q6PIV7 304 aa8.12□□□□□ -1.11
PRKDC-203ENST00000432581 IGLV8-61A0A075B6I0 122 aa8.11□□□□□ -1.11
PRKDC-203ENST00000432581 DPM2O94777 84 aa8.11□□□□□ -1.11
PRKDC-203ENST00000432581 SPRR1BP22528 89 aa8.1□□□□□ -1.11
PRKDC-203ENST00000432581 S100A6P06703 90 aa8.09□□□□□ -1.11
PRKDC-203ENST00000432581 COA6Q5JTJ3 125 aaKnown RBP8.09□□□□□ -1.11
PRKDC-203ENST00000432581 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.11
PRKDC-203ENST00000432581 HSPB8Q9UJY1 196 aa8.09□□□□□ -1.11
PRKDC-203ENST00000432581 C9orf92A6NGG3 77 aa8.08□□□□□ -1.12
PRKDC-203ENST00000432581 NPC2P61916 151 aa8.08□□□□□ -1.12
PRKDC-203ENST00000432581 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
PRKDC-203ENST00000432581 DHRS4-AS1Q9P1J3 65 aa8.08□□□□□ -1.12
PRKDC-203ENST00000432581 LAMTOR3Q9UHA4 124 aa8.08□□□□□ -1.12
PRKDC-203ENST00000432581 IGKCP01834 107 aa8.07□□□□□ -1.12
PRKDC-203ENST00000432581 A0A0J9YXY3 114 aa8.06□□□□□ -1.12
PRKDC-203ENST00000432581 LOC105371267A0A1B0GV96 52 aa8.06□□□□□ -1.12
PRKDC-203ENST00000432581 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
PRKDC-203ENST00000432581 SERF1AO75920 110 aa8.06□□□□□ -1.12
PRKDC-203ENST00000432581 ADAMTSL4-AS1Q5T5F5 129 aa8.06□□□□□ -1.12
PRKDC-203ENST00000432581 SNRPEP62304 92 aaKnown RBP8.05□□□□□ -1.12
PRKDC-203ENST00000432581 PMCHL2Q9BQD1 86 aa8.05□□□□□ -1.12
PRKDC-203ENST00000432581 LINC00310P59036 64 aa8.04□□□□□ -1.12
PRKDC-203ENST00000432581 CD164Q04900 197 aa8.04□□□□□ -1.12
PRKDC-203ENST00000432581 SPANXCQ9NY87 97 aa8.04□□□□□ -1.12
PRKDC-203ENST00000432581 FABP4P15090 132 aa8.03□□□□□ -1.12
PRKDC-203ENST00000432581 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
PRKDC-203ENST00000432581 OR13C6PQ8NH95 151 aa8.03□□□□□ -1.12
PRKDC-203ENST00000432581 E9PLD3 99 aa8.02□□□□□ -1.13
PRKDC-203ENST00000432581 HIST3H2BBQ8N257 126 aa8.02□□□□□ -1.13
PRKDC-203ENST00000432581 KRTAP10-6P60371 365 aaPredicted RBP8.01□□□□□ -1.13
PRKDC-203ENST00000432581 LINC00308Q8TCZ7 52 aa8.01□□□□□ -1.13
PRKDC-203ENST00000432581 SPANXDQ9BXN6 97 aa8.01□□□□□ -1.13
PRKDC-203ENST00000432581 PRO1933Q9H354 126 aa8.01□□□□□ -1.13
PRKDC-203ENST00000432581 ELOF1P60002 83 aaKnown RBP8□□□□□ -1.13
PRKDC-203ENST00000432581 Q5XG85 94 aa8□□□□□ -1.13
PRKDC-203ENST00000432581 H7C2G1 150 aa7.99□□□□□ -1.13
PRKDC-203ENST00000432581 TIMM17BO60830 172 aa7.99□□□□□ -1.13
PRKDC-203ENST00000432581 COX7BP24311 80 aa7.99□□□□□ -1.13
PRKDC-203ENST00000432581 TAL2Q16559 108 aa7.99□□□□□ -1.13
PRKDC-203ENST00000432581 LITAFQ99732 161 aa7.99□□□□□ -1.13
PRKDC-203ENST00000432581 M0R2T5 61 aa7.98□□□□□ -1.13
PRKDC-203ENST00000432581 S100A2P29034 98 aa7.98□□□□□ -1.13
PRKDC-203ENST00000432581 Q1RN00 199 aa7.98□□□□□ -1.13
PRKDC-203ENST00000432581 TEX49A0A1B0GTD5 131 aa7.97□□□□□ -1.13
PRKDC-203ENST00000432581 LINC00518Q8N0U6 118 aa7.97□□□□□ -1.13
PRKDC-203ENST00000432581 DEFB105AQ8NG35 78 aa7.97□□□□□ -1.13
PRKDC-203ENST00000432581 HIST1H2BLQ99880 126 aa7.97□□□□□ -1.13
PRKDC-203ENST00000432581 AKR1D1P51857 326 aa7.96□□□□□ -1.14
PRKDC-203ENST00000432581 C6orf99Q4VX62 202 aa7.96□□□□□ -1.14
PRKDC-203ENST00000432581 RPL37P61927 97 aaKnown RBP7.95□□□□□ -1.14
PRKDC-203ENST00000432581 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
PRKDC-203ENST00000432581 COX6B2Q6YFQ2 88 aa7.95□□□□□ -1.14
PRKDC-203ENST00000432581 TRBV7-6A0A0J9YX20 115 aa7.93□□□□□ -1.14
PRKDC-203ENST00000432581 SMIM29Q86T20 159 aa7.92□□□□□ -1.14
PRKDC-203ENST00000432581 ZNF815PA8K554 130 aa7.91□□□□□ -1.14
PRKDC-203ENST00000432581 SYS1-DBNDD2H3BUS1 97 aa7.91□□□□□ -1.14
PRKDC-203ENST00000432581 IGLV5-48A0A075B6I7 105 aa7.9□□□□□ -1.14
PRKDC-203ENST00000432581 A0A1B0GWB2 263 aa7.9□□□□□ -1.14
PRKDC-203ENST00000432581 SMIM6P0DI80 62 aa7.9□□□□□ -1.14
PRKDC-203ENST00000432581 TCL1BO95988 128 aa7.88□□□□□ -1.15
PRKDC-203ENST00000432581 FLGP20930 4061 aaPredicted RBP7.88□□□□□ -1.15
PRKDC-203ENST00000432581 LINC01545Q5VT33 79 aa7.87□□□□□ -1.15
PRKDC-203ENST00000432581 COPS9Q8WXC6 57 aa7.87□□□□□ -1.15
PRKDC-203ENST00000432581 A0A0G2JQZ4 141 aa7.86□□□□□ -1.15
PRKDC-203ENST00000432581 PYY3Q5JQD4 70 aa7.86□□□□□ -1.15
PRKDC-203ENST00000432581 A4D1N5 150 aa7.85□□□□□ -1.15
PRKDC-203ENST00000432581 PET117Q6UWS5 81 aa7.85□□□□□ -1.15
PRKDC-203ENST00000432581 TTTY13Q9BZ97 58 aa7.85□□□□□ -1.15
PRKDC-203ENST00000432581 A6NDN8 102 aa7.84□□□□□ -1.15
PRKDC-203ENST00000432581 C3orf79P0CE67 100 aa7.84□□□□□ -1.15
PRKDC-203ENST00000432581 KRTDAPP60985 99 aa7.84□□□□□ -1.15
PRKDC-203ENST00000432581 NHP2Q9NX24 153 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms