RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 LINC00588Q9Y4M8 146 aa12.08□□□□□ -0.48
CHD1L-204ENST00000431239 TRBV7-6A0A0J9YX20 115 aa12.08□□□□□ -0.48
CHD1L-204ENST00000431239 C7orf33Q8WU49 177 aa12.08□□□□□ -0.48
CHD1L-204ENST00000431239 DNAH10OSP0CZ25 163 aa12.07□□□□□ -0.48
CHD1L-204ENST00000431239 DNAH3Q8TD57 4116 aa12.07□□□□□ -0.48
CHD1L-204ENST00000431239 PDE6GP18545 87 aa12.07□□□□□ -0.48
CHD1L-204ENST00000431239 H3BQ85 93 aa12.06□□□□□ -0.48
CHD1L-204ENST00000431239 LOC107984640A0A0U1RRK4 108 aa12.06□□□□□ -0.48
CHD1L-204ENST00000431239 LYSTQ99698 3801 aa12.04□□□□□ -0.48
CHD1L-204ENST00000431239 STAB2Q8WWQ8 2551 aa12.03□□□□□ -0.48
CHD1L-204ENST00000431239 TRAV10A0A0B4J240 114 aa12.02□□□□□ -0.48
CHD1L-204ENST00000431239 C20orf197Q8N268 126 aa12.01□□□□□ -0.49
CHD1L-204ENST00000431239 KCNQ1DNQ9H478 68 aa12□□□□□ -0.49
CHD1L-204ENST00000431239 C3orf84H3BNL1 204 aa12□□□□□ -0.49
CHD1L-204ENST00000431239 Q8N9L7 120 aa12□□□□□ -0.49
CHD1L-204ENST00000431239 FAM19A5Q7Z5A7 132 aaPredicted RBP11.99□□□□□ -0.49
CHD1L-204ENST00000431239 CXCL6P80162 114 aa11.97□□□□□ -0.49
CHD1L-204ENST00000431239 Q8N377 158 aa11.97□□□□□ -0.49
CHD1L-204ENST00000431239 HUWE1Q7Z6Z7 4374 aaKnown RBP11.96□□□□□ -0.49
CHD1L-204ENST00000431239 F8WDY8 70 aa11.96□□□□□ -0.49
CHD1L-204ENST00000431239 COL7A1Q02388 2944 aa11.96□□□□□ -0.5
CHD1L-204ENST00000431239 TMEM258P61165 79 aa11.95□□□□□ -0.5
CHD1L-204ENST00000431239 KRTAP7-1Q8IUC3 87 aa11.95□□□□□ -0.5
CHD1L-204ENST00000431239 Q9BRP9 147 aa11.95□□□□□ -0.5
CHD1L-204ENST00000431239 TENM2Q9NT68 2774 aa11.95□□□□□ -0.5
CHD1L-204ENST00000431239 ST20-AS1Q8NBB2 130 aa11.94□□□□□ -0.5
CHD1L-204ENST00000431239 DNAH10Q8IVF4 4471 aa11.94□□□□□ -0.5
CHD1L-204ENST00000431239 ETDCA0A1B0GVM5 59 aa11.93□□□□□ -0.5
CHD1L-204ENST00000431239 K7EIL1 84 aa11.93□□□□□ -0.5
CHD1L-204ENST00000431239 Q6ZRX8 168 aa11.93□□□□□ -0.5
CHD1L-204ENST00000431239 J3KT08 172 aa11.93□□□□□ -0.5
CHD1L-204ENST00000431239 TLX1NBP0CAT3 122 aa11.93□□□□□ -0.5
CHD1L-204ENST00000431239 DNAH1Q9P2D7 4330 aa11.92□□□□□ -0.5
CHD1L-204ENST00000431239 IGLV1-50A0A075B6I6 118 aa11.92□□□□□ -0.5
CHD1L-204ENST00000431239 TM2D3Q9BRN9 247 aa11.91□□□□□ -0.5
CHD1L-204ENST00000431239 NREPQ16612 68 aa11.91□□□□□ -0.5
CHD1L-204ENST00000431239 SNURFQ9Y675 71 aa11.91□□□□□ -0.5
CHD1L-204ENST00000431239 CSMD3Q7Z407 3707 aa11.9□□□□□ -0.5
CHD1L-204ENST00000431239 TRAV7A0A075B6U4 112 aa11.9□□□□□ -0.5
CHD1L-204ENST00000431239 BPY2O14599 106 aa11.89□□□□□ -0.51
CHD1L-204ENST00000431239 DPH3Q96FX2 82 aa11.89□□□□□ -0.51
CHD1L-204ENST00000431239 ERC2-IT1O76042 136 aa11.89□□□□□ -0.51
CHD1L-204ENST00000431239 KRTAP4-16G5E9R7 235 aaPredicted RBP11.88□□□□□ -0.51
CHD1L-204ENST00000431239 MRPL55Q7Z7F7 128 aaKnown RBP11.88□□□□□ -0.51
CHD1L-204ENST00000431239 DHRS4-AS1Q9P1J3 65 aa11.88□□□□□ -0.51
CHD1L-204ENST00000431239 UBE2BP63146 152 aa11.87□□□□□ -0.51
CHD1L-204ENST00000431239 RMI2Q96E14 147 aa11.87□□□□□ -0.51
CHD1L-204ENST00000431239 PRYO14603 147 aa11.87□□□□□ -0.51
CHD1L-204ENST00000431239 IGKV2-24A0A0C4DH68 120 aa11.87□□□□□ -0.51
CHD1L-204ENST00000431239 PLA2G2DQ9UNK4 145 aa11.87□□□□□ -0.51
CHD1L-204ENST00000431239 KRTAP1-5Q9BYS1 174 aa11.85□□□□□ -0.51
CHD1L-204ENST00000431239 OXTP01178 125 aa11.85□□□□□ -0.51
CHD1L-204ENST00000431239 IGLV5-48A0A075B6I7 105 aa11.83□□□□□ -0.51
CHD1L-204ENST00000431239 IGKV4-1P06312 121 aa11.83□□□□□ -0.52
CHD1L-204ENST00000431239 SPRR1AP35321 89 aa11.83□□□□□ -0.52
CHD1L-204ENST00000431239 SRRM2Q9UQ35 2752 aaKnown RBP11.83□□□□□ -0.52
CHD1L-204ENST00000431239 IGLV5-37A0A075B6J1 123 aa11.83□□□□□ -0.52
CHD1L-204ENST00000431239 SVIPQ8NHG7 77 aa11.83□□□□□ -0.52
CHD1L-204ENST00000431239 C1orf137Q5JT78 98 aa11.82□□□□□ -0.52
CHD1L-204ENST00000431239 A0A1W2PNM2 257 aa11.82□□□□□ -0.52
CHD1L-204ENST00000431239 FUSP35637 526 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHD1L-204ENST00000431239 A0A0G2JQZ4 141 aa11.81□□□□□ -0.52
CHD1L-204ENST00000431239 A0A1W2PNN7 141 aa11.81□□□□□ -0.52
CHD1L-204ENST00000431239 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.8□□□□□ -0.52
CHD1L-204ENST00000431239 H7BZZ5 65 aa11.8□□□□□ -0.52
CHD1L-204ENST00000431239 DNAH9Q9NYC9 4486 aa11.8□□□□□ -0.52
CHD1L-204ENST00000431239 A0A096LNI7 61 aa11.8□□□□□ -0.52
CHD1L-204ENST00000431239 PSCAO43653 123 aa11.79□□□□□ -0.52
CHD1L-204ENST00000431239 BCE1O60756 84 aa11.79□□□□□ -0.52
CHD1L-204ENST00000431239 REG3GQ6UW15 175 aa11.79□□□□□ -0.52
CHD1L-204ENST00000431239 RPS28P62857 69 aaKnown RBP11.78□□□□□ -0.52
CHD1L-204ENST00000431239 PRLHP81277 87 aa11.78□□□□□ -0.52
CHD1L-204ENST00000431239 FAM236DA0A1B0GTK5 79 aa11.77□□□□□ -0.53
CHD1L-204ENST00000431239 FAM236CP0DP71 79 aa11.77□□□□□ -0.53
CHD1L-204ENST00000431239 TNP2Q05952 138 aa11.76□□□□□ -0.53
CHD1L-204ENST00000431239 F8WEM9 126 aa11.76□□□□□ -0.53
CHD1L-204ENST00000431239 KLKP1Q107X0 134 aa11.76□□□□□ -0.53
CHD1L-204ENST00000431239 UBE2DNLQ8IWF7 75 aa11.76□□□□□ -0.53
CHD1L-204ENST00000431239 DNAH7Q8WXX0 4024 aa11.75□□□□□ -0.53
CHD1L-204ENST00000431239 Q8NBF4 154 aa11.73□□□□□ -0.53
CHD1L-204ENST00000431239 CHTF8P0CG12 524 aa11.73□□□□□ -0.53
CHD1L-204ENST00000431239 HIGD2AQ9BW72 106 aa11.73□□□□□ -0.53
CHD1L-204ENST00000431239 TMEM254Q8TBM7 123 aa11.7□□□□□ -0.54
CHD1L-204ENST00000431239 LINC00476Q8WZB0 136 aa11.7□□□□□ -0.54
CHD1L-204ENST00000431239 SMIM29Q86T20 159 aa11.69□□□□□ -0.54
CHD1L-204ENST00000431239 C16orf90A8MZG2 172 aa11.69□□□□□ -0.54
CHD1L-204ENST00000431239 OCR1Q9BZK8 76 aa11.67□□□□□ -0.54
CHD1L-204ENST00000431239 DEFB116Q30KQ4 102 aa11.66□□□□□ -0.54
CHD1L-204ENST00000431239 FAM30AQ9NZY2 134 aa11.66□□□□□ -0.54
CHD1L-204ENST00000431239 PHF5AQ7RTV0 110 aaKnown RBP11.66□□□□□ -0.54
CHD1L-204ENST00000431239 KRTAP11-1Q8IUC1 163 aa11.65□□□□□ -0.54
CHD1L-204ENST00000431239 SPRR4Q96PI1 79 aa11.65□□□□□ -0.54
CHD1L-204ENST00000431239 K7EQZ3 153 aa11.64□□□□□ -0.55
CHD1L-204ENST00000431239 CNBPP62633 177 aaKnown RBP11.64□□□□□ -0.55
CHD1L-204ENST00000431239 IGFL1Q6UW32 110 aa11.63□□□□□ -0.55
CHD1L-204ENST00000431239 DSCR10P59022 87 aa11.63□□□□□ -0.55
CHD1L-204ENST00000431239 APLNQ9ULZ1 77 aa11.63□□□□□ -0.55
CHD1L-204ENST00000431239 C4orf26Q17RF5 130 aa11.62□□□□□ -0.55
CHD1L-204ENST00000431239 PLECQ15149 4684 aaKnown RBP11.6□□□□□ -0.55
CHD1L-204ENST00000431239 A0A1B0GW54 56 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms