RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 TRAV23DV6A0A075B6W5 121 aa7.09□□□□□ -1.27
CUX1-205ENST00000425244 GVQW2A0A096LPI5 108 aaPredicted RBP7.09□□□□□ -1.27
CUX1-205ENST00000425244 Q6JHZ5 121 aa7.09□□□□□ -1.27
CUX1-205ENST00000425244 MUC7Q8TAX7 377 aa7.09□□□□□ -1.27
CUX1-205ENST00000425244 SERP1Q9Y6X1 66 aa7.09□□□□□ -1.27
CUX1-205ENST00000425244 Q6ZQY7 126 aa7.09□□□□□ -1.27
CUX1-205ENST00000425244 TRAV10A0A0B4J240 114 aa7.08□□□□□ -1.28
CUX1-205ENST00000425244 Q6ZRU5 148 aa7.08□□□□□ -1.28
CUX1-205ENST00000425244 DIRC1Q969H9 104 aa7.08□□□□□ -1.28
CUX1-205ENST00000425244 IGKV2D-24A0A075B6R9 120 aa7.08□□□□□ -1.28
CUX1-205ENST00000425244 KRTAP21-3Q3LHN1 58 aa7.08□□□□□ -1.28
CUX1-205ENST00000425244 RBM3P98179 157 aaKnown RBP7.07□□□□□ -1.28
CUX1-205ENST00000425244 FAM19A1Q7Z5A9 133 aa7.07□□□□□ -1.28
CUX1-205ENST00000425244 H3BNG1 76 aa7.07□□□□□ -1.28
CUX1-205ENST00000425244 ZNF73O43830 326 aaPredicted RBP7.07□□□□□ -1.28
CUX1-205ENST00000425244 C15orf56Q8N910 161 aa7.07□□□□□ -1.28
CUX1-205ENST00000425244 DNAH7Q8WXX0 4024 aa7.06□□□□□ -1.28
CUX1-205ENST00000425244 USP17L23D6RBM5 183 aa7.06□□□□□ -1.28
CUX1-205ENST00000425244 KRTAP26-1Q6PEX3 210 aa7.06□□□□□ -1.28
CUX1-205ENST00000425244 BRK1Q8WUW1 75 aa7.06□□□□□ -1.28
CUX1-205ENST00000425244 FP248Q71RG6 208 aaPredicted RBP7.05□□□□□ -1.28
CUX1-205ENST00000425244 COX7BP24311 80 aa7.05□□□□□ -1.28
CUX1-205ENST00000425244 SMIM26A0A096LP01 95 aa7.04□□□□□ -1.28
CUX1-205ENST00000425244 VPREB1P12018 145 aa7.04□□□□□ -1.28
CUX1-205ENST00000425244 PLECQ15149 4684 aaKnown RBP7.04□□□□□ -1.28
CUX1-205ENST00000425244 UBL5Q9BZL1 73 aa7.04□□□□□ -1.28
CUX1-205ENST00000425244 M0R2N4 97 aa7.03□□□□□ -1.28
CUX1-205ENST00000425244 Q6ZQT0 140 aa7.03□□□□□ -1.28
CUX1-205ENST00000425244 STARD9Q9P2P6 4700 aa7.03□□□□□ -1.28
CUX1-205ENST00000425244 LINC01556Q5JQF7 62 aa7.02□□□□□ -1.29
CUX1-205ENST00000425244 Q6ZRP5 223 aa7.02□□□□□ -1.29
CUX1-205ENST00000425244 M0R378 163 aa7.02□□□□□ -1.29
CUX1-205ENST00000425244 ELOF1P60002 83 aaKnown RBP7.01□□□□□ -1.29
CUX1-205ENST00000425244 SYCNQ0VAF6 134 aa7.01□□□□□ -1.29
CUX1-205ENST00000425244 LOC110117498A0A087WWA1 95 aa7□□□□□ -1.29
CUX1-205ENST00000425244 LINC00588Q9Y4M8 146 aa7□□□□□ -1.29
CUX1-205ENST00000425244 ATP5EP2Q5VTU8 51 aa7□□□□□ -1.29
CUX1-205ENST00000425244 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.99□□□□□ -1.29
CUX1-205ENST00000425244 HAMPP81172 84 aa6.99□□□□□ -1.29
CUX1-205ENST00000425244 H7BZZ5 65 aa6.98□□□□□ -1.29
CUX1-205ENST00000425244 C20orf197Q8N268 126 aa6.98□□□□□ -1.29
CUX1-205ENST00000425244 NKAPP1Q8N9T2 125 aa6.98□□□□□ -1.29
CUX1-205ENST00000425244 GHRHP01286 108 aa6.97□□□□□ -1.29
CUX1-205ENST00000425244 DNAH10Q8IVF4 4471 aa6.97□□□□□ -1.29
CUX1-205ENST00000425244 CD164Q04900 197 aa6.97□□□□□ -1.29
CUX1-205ENST00000425244 SERTAD4-AS1Q5TG53 156 aa6.97□□□□□ -1.29
CUX1-205ENST00000425244 Q6ZVQ6 151 aa6.97□□□□□ -1.29
CUX1-205ENST00000425244 UBE2DNLQ8IWF7 75 aa6.97□□□□□ -1.29
CUX1-205ENST00000425244 LINC00474Q9P2X8 69 aa6.97□□□□□ -1.29
CUX1-205ENST00000425244 DNAH1Q9P2D7 4330 aa6.96□□□□□ -1.29
CUX1-205ENST00000425244 H3BQ85 93 aa6.96□□□□□ -1.3
CUX1-205ENST00000425244 DNAH10OSP0CZ25 163 aa6.96□□□□□ -1.3
CUX1-205ENST00000425244 PMAIP1Q13794 54 aa6.96□□□□□ -1.3
CUX1-205ENST00000425244 CASC10Q5T4H9 136 aa6.96□□□□□ -1.3
CUX1-205ENST00000425244 LINC00528Q8N1L1 170 aa6.96□□□□□ -1.3
CUX1-205ENST00000425244 TRBV7-6A0A0J9YX20 115 aa6.96□□□□□ -1.3
CUX1-205ENST00000425244 PDE6GP18545 87 aa6.95□□□□□ -1.3
CUX1-205ENST00000425244 LINC01547P58512 204 aaPredicted RBP6.95□□□□□ -1.3
CUX1-205ENST00000425244 DEFB105AQ8NG35 78 aa6.95□□□□□ -1.3
CUX1-205ENST00000425244 SCXQ7RTU7 201 aa6.94□□□□□ -1.3
CUX1-205ENST00000425244 C7orf33Q8WU49 177 aa6.94□□□□□ -1.3
CUX1-205ENST00000425244 RPL37AP8A6NKH3 93 aa6.94□□□□□ -1.3
CUX1-205ENST00000425244 APLNQ9ULZ1 77 aa6.94□□□□□ -1.3
CUX1-205ENST00000425244 DYNC2H1Q8NCM8 4307 aaKnown RBP6.94□□□□□ -1.3
CUX1-205ENST00000425244 TRBV7-4A0A0J9YYF1 115 aa6.93□□□□□ -1.3
CUX1-205ENST00000425244 FAM168BA1KXE4 195 aa6.93□□□□□ -1.3
CUX1-205ENST00000425244 NUPR2A6NF83 97 aa6.93□□□□□ -1.3
CUX1-205ENST00000425244 KCNQ1DNQ9H478 68 aa6.91□□□□□ -1.3
CUX1-205ENST00000425244 KMT2AQ03164 3969 aa6.9□□□□□ -1.3
CUX1-205ENST00000425244 KLKP1Q107X0 134 aa6.9□□□□□ -1.31
CUX1-205ENST00000425244 PRR15Q8IV56 129 aa6.88□□□□□ -1.31
CUX1-205ENST00000425244 KRTAP1-5Q9BYS1 174 aa6.88□□□□□ -1.31
CUX1-205ENST00000425244 ETDCA0A1B0GVM5 59 aa6.87□□□□□ -1.31
CUX1-205ENST00000425244 C3orf84H3BNL1 204 aa6.87□□□□□ -1.31
CUX1-205ENST00000425244 CXCL6P80162 114 aa6.87□□□□□ -1.31
CUX1-205ENST00000425244 RMI2Q96E14 147 aa6.87□□□□□ -1.31
CUX1-205ENST00000425244 TRAV7A0A075B6U4 112 aa6.87□□□□□ -1.31
CUX1-205ENST00000425244 F8WEM9 126 aa6.87□□□□□ -1.31
CUX1-205ENST00000425244 TLX1NBP0CAT3 122 aa6.86□□□□□ -1.31
CUX1-205ENST00000425244 Q8N377 158 aa6.86□□□□□ -1.31
CUX1-205ENST00000425244 Q8N9L7 120 aa6.86□□□□□ -1.31
CUX1-205ENST00000425244 ATP5EP56381 51 aaPredicted RBP6.86□□□□□ -1.31
CUX1-205ENST00000425244 Q6ZRX8 168 aa6.86□□□□□ -1.31
CUX1-205ENST00000425244 ST20-AS1Q8NBB2 130 aa6.86□□□□□ -1.31
CUX1-205ENST00000425244 IGLV1-50A0A075B6I6 118 aa6.85□□□□□ -1.31
CUX1-205ENST00000425244 BCE1O60756 84 aa6.85□□□□□ -1.31
CUX1-205ENST00000425244 KRTAP7-1Q8IUC3 87 aa6.85□□□□□ -1.31
CUX1-205ENST00000425244 MPLKIPQ8TAP9 179 aa6.85□□□□□ -1.31
CUX1-205ENST00000425244 Q9BRP9 147 aa6.85□□□□□ -1.31
CUX1-205ENST00000425244 DHRS4-AS1Q9P1J3 65 aa6.85□□□□□ -1.31
CUX1-205ENST00000425244 SNURFQ9Y675 71 aa6.85□□□□□ -1.31
CUX1-205ENST00000425244 NREPQ16612 68 aa6.84□□□□□ -1.31
CUX1-205ENST00000425244 VPS13DQ5THJ4 4388 aa6.84□□□□□ -1.31
CUX1-205ENST00000425244 MRPL55Q7Z7F7 128 aaKnown RBP6.84□□□□□ -1.31
CUX1-205ENST00000425244 PLA2G2DQ9UNK4 145 aa6.84□□□□□ -1.31
CUX1-205ENST00000425244 PRYO14603 147 aa6.83□□□□□ -1.32
CUX1-205ENST00000425244 PSCAO43653 123 aa6.83□□□□□ -1.32
CUX1-205ENST00000425244 FAM229BQ4G0N7 80 aa6.83□□□□□ -1.32
CUX1-205ENST00000425244 UBE2BP63146 152 aa6.83□□□□□ -1.32
CUX1-205ENST00000425244 WWC2-AS2Q96NR7 200 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms