RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 ATP5EP2Q5VTU8 51 aa7.93□□□□□ -1.14
ERCC1-204ENST00000423698 JMJD7-PLA2G4BH0Y9G9 81 aa7.93□□□□□ -1.14
ERCC1-204ENST00000423698 TMEM256-PLSCR3K7ERE1 68 aa7.93□□□□□ -1.14
ERCC1-204ENST00000423698 TRAV7A0A075B6U4 112 aa7.92□□□□□ -1.14
ERCC1-204ENST00000423698 NDUFC1O43677 76 aa7.92□□□□□ -1.14
ERCC1-204ENST00000423698 KRTAP10-11P60412 298 aa7.92□□□□□ -1.14
ERCC1-204ENST00000423698 Q6ZVQ6 151 aa7.92□□□□□ -1.14
ERCC1-204ENST00000423698 KPRPQ5T749 579 aaPredicted RBP7.91□□□□□ -1.14
ERCC1-204ENST00000423698 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.91□□□□□ -1.14
ERCC1-204ENST00000423698 LYSTQ99698 3801 aa7.9□□□□□ -1.14
ERCC1-204ENST00000423698 TRBV10-3A0A0K0K1G6 114 aa7.9□□□□□ -1.14
ERCC1-204ENST00000423698 IGKV2D-24A0A075B6R9 120 aa7.89□□□□□ -1.15
ERCC1-204ENST00000423698 MRPL55Q7Z7F7 128 aaKnown RBP7.89□□□□□ -1.15
ERCC1-204ENST00000423698 A0A0J9YWU9 116 aa7.89□□□□□ -1.15
ERCC1-204ENST00000423698 MIFP14174 115 aa7.88□□□□□ -1.15
ERCC1-204ENST00000423698 Q6ZQT0 140 aa7.88□□□□□ -1.15
ERCC1-204ENST00000423698 Q6ZQY7 126 aa7.88□□□□□ -1.15
ERCC1-204ENST00000423698 SRRM2Q9UQ35 2752 aaKnown RBP7.88□□□□□ -1.15
ERCC1-204ENST00000423698 CAMK2N2Q96S95 79 aa7.88□□□□□ -1.15
ERCC1-204ENST00000423698 C6orf48Q9UBA6 75 aa7.88□□□□□ -1.15
ERCC1-204ENST00000423698 LELP1Q5T871 98 aa7.87□□□□□ -1.15
ERCC1-204ENST00000423698 ESRGQ1W209 222 aa7.86□□□□□ -1.15
ERCC1-204ENST00000423698 DEFB105AQ8NG35 78 aa7.85□□□□□ -1.15
ERCC1-204ENST00000423698 NREPQ16612 68 aa7.84□□□□□ -1.15
ERCC1-204ENST00000423698 PRR4Q16378 134 aa7.84□□□□□ -1.15
ERCC1-204ENST00000423698 COL7A1Q02388 2944 aa7.83□□□□□ -1.16
ERCC1-204ENST00000423698 BPY2O14599 106 aa7.83□□□□□ -1.16
ERCC1-204ENST00000423698 KRTAP24-1Q3LI83 254 aa7.83□□□□□ -1.16
ERCC1-204ENST00000423698 TMEM254Q8TBM7 123 aa7.83□□□□□ -1.16
ERCC1-204ENST00000423698 LINC00575Q6W349 94 aa7.82□□□□□ -1.16
ERCC1-204ENST00000423698 RBM12B-AS1Q9P1G2 102 aa7.82□□□□□ -1.16
ERCC1-204ENST00000423698 DEFB131BA0A096LNP1 70 aa7.82□□□□□ -1.16
ERCC1-204ENST00000423698 HIGD2AQ9BW72 106 aa7.82□□□□□ -1.16
ERCC1-204ENST00000423698 CMYA5Q8N3K9 4069 aa7.81□□□□□ -1.16
ERCC1-204ENST00000423698 RPL37AP8A6NKH3 93 aa7.81□□□□□ -1.16
ERCC1-204ENST00000423698 CASC10Q5T4H9 136 aa7.81□□□□□ -1.16
ERCC1-204ENST00000423698 LINC00167Q96N53 147 aa7.8□□□□□ -1.16
ERCC1-204ENST00000423698 TRBV7-4A0A0J9YYF1 115 aa7.8□□□□□ -1.16
ERCC1-204ENST00000423698 C3orf84H3BNL1 204 aa7.8□□□□□ -1.16
ERCC1-204ENST00000423698 PSPHP1O15172 72 aa7.79□□□□□ -1.16
ERCC1-204ENST00000423698 KTN1-AS1Q86SY8 53 aa7.79□□□□□ -1.16
ERCC1-204ENST00000423698 MUC7Q8TAX7 377 aa7.79□□□□□ -1.16
ERCC1-204ENST00000423698 COX17Q14061 63 aa7.78□□□□□ -1.16
ERCC1-204ENST00000423698 C11orf45Q8TAV5 145 aa7.78□□□□□ -1.16
ERCC1-204ENST00000423698 PRR34Q9NV39 138 aa7.78□□□□□ -1.16
ERCC1-204ENST00000423698 Q6ZRP5 223 aa7.78□□□□□ -1.16
ERCC1-204ENST00000423698 FAM168BA1KXE4 195 aa7.77□□□□□ -1.17
ERCC1-204ENST00000423698 Q1T7F1 81 aa7.77□□□□□ -1.17
ERCC1-204ENST00000423698 FAM30AQ9NZY2 134 aa7.77□□□□□ -1.17
ERCC1-204ENST00000423698 ZNF73O43830 326 aaPredicted RBP7.76□□□□□ -1.17
ERCC1-204ENST00000423698 FUSP35637 526 aaKnown RBP eCLIP7.76□□□□□ -1.17
ERCC1-204ENST00000423698 C15orf56Q8N910 161 aa7.76□□□□□ -1.17
ERCC1-204ENST00000423698 DIRC1Q969H9 104 aa7.76□□□□□ -1.17
ERCC1-204ENST00000423698 DNAH10Q8IVF4 4471 aa7.75□□□□□ -1.17
ERCC1-204ENST00000423698 ERC2-IT1O76042 136 aa7.74□□□□□ -1.17
ERCC1-204ENST00000423698 A8MU10 97 aa7.74□□□□□ -1.17
ERCC1-204ENST00000423698 PRYO14603 147 aa7.74□□□□□ -1.17
ERCC1-204ENST00000423698 IGLV6-57P01721 117 aa7.74□□□□□ -1.17
ERCC1-204ENST00000423698 SERTAD4-AS1Q5TG53 156 aa7.74□□□□□ -1.17
ERCC1-204ENST00000423698 LOC110117498A0A087WWA1 95 aa7.73□□□□□ -1.17
ERCC1-204ENST00000423698 COX7BP24311 80 aa7.73□□□□□ -1.17
ERCC1-204ENST00000423698 A0A0G2JQZ4 141 aa7.72□□□□□ -1.17
ERCC1-204ENST00000423698 A0A1W2PNN7 141 aa7.72□□□□□ -1.17
ERCC1-204ENST00000423698 CXCL6P80162 114 aa7.72□□□□□ -1.17
ERCC1-204ENST00000423698 VPREB1P12018 145 aa7.71□□□□□ -1.18
ERCC1-204ENST00000423698 LINC00588Q9Y4M8 146 aa7.71□□□□□ -1.18
ERCC1-204ENST00000423698 NKAPP1Q8N9T2 125 aa7.7□□□□□ -1.18
ERCC1-204ENST00000423698 SYCNQ0VAF6 134 aa7.7□□□□□ -1.18
ERCC1-204ENST00000423698 IGKV2-24A0A0C4DH68 120 aa7.69□□□□□ -1.18
ERCC1-204ENST00000423698 M0R378 163 aa7.69□□□□□ -1.18
ERCC1-204ENST00000423698 KRTAP26-1Q6PEX3 210 aa7.69□□□□□ -1.18
ERCC1-204ENST00000423698 NDUFS5O43920 106 aa7.68□□□□□ -1.18
ERCC1-204ENST00000423698 IGKV4-1P06312 121 aa7.68□□□□□ -1.18
ERCC1-204ENST00000423698 SMIM29Q86T20 159 aa7.68□□□□□ -1.18
ERCC1-204ENST00000423698 H3BS24 57 aa7.67□□□□□ -1.18
ERCC1-204ENST00000423698 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.67□□□□□ -1.18
ERCC1-204ENST00000423698 ST20-AS1Q8NBB2 130 aa7.67□□□□□ -1.18
ERCC1-204ENST00000423698 PHF5AQ7RTV0 110 aaKnown RBP7.66□□□□□ -1.18
ERCC1-204ENST00000423698 OCR1Q9BZK8 76 aa7.66□□□□□ -1.18
ERCC1-204ENST00000423698 EGFEM1PQ0D2K5 195 aa7.66□□□□□ -1.18
ERCC1-204ENST00000423698 DEFB116Q30KQ4 102 aa7.65□□□□□ -1.18
ERCC1-204ENST00000423698 C7orf33Q8WU49 177 aa7.65□□□□□ -1.18
ERCC1-204ENST00000423698 C8orf87E5RJ46 101 aa7.65□□□□□ -1.18
ERCC1-204ENST00000423698 C1orf64Q8NEQ6 169 aa7.65□□□□□ -1.18
ERCC1-204ENST00000423698 hDV103S1A0JD37 113 aa7.65□□□□□ -1.19
ERCC1-204ENST00000423698 UBE2BP63146 152 aa7.64□□□□□ -1.19
ERCC1-204ENST00000423698 ELOF1P60002 83 aaKnown RBP7.64□□□□□ -1.19
ERCC1-204ENST00000423698 DNAH7Q8WXX0 4024 aa7.62□□□□□ -1.19
ERCC1-204ENST00000423698 GVQW2A0A096LPI5 108 aaPredicted RBP7.62□□□□□ -1.19
ERCC1-204ENST00000423698 LINC01556Q5JQF7 62 aa7.62□□□□□ -1.19
ERCC1-204ENST00000423698 HUWE1Q7Z6Z7 4374 aaKnown RBP7.61□□□□□ -1.19
ERCC1-204ENST00000423698 A8MUN3 132 aa7.61□□□□□ -1.19
ERCC1-204ENST00000423698 PDE6GP18545 87 aa7.61□□□□□ -1.19
ERCC1-204ENST00000423698 TGP01266 2768 aa7.61□□□□□ -1.19
ERCC1-204ENST00000423698 LINC00528Q8N1L1 170 aa7.6□□□□□ -1.19
ERCC1-204ENST00000423698 K7EIL1 84 aa7.6□□□□□ -1.19
ERCC1-204ENST00000423698 A0A096LNI7 61 aa7.59□□□□□ -1.19
ERCC1-204ENST00000423698 TRAV22A0A0B4J277 110 aa7.58□□□□□ -1.2
ERCC1-204ENST00000423698 SPTSSBQ8NFR3 76 aa7.58□□□□□ -1.2
ERCC1-204ENST00000423698 ETDCA0A1B0GVM5 59 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms