RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 MT-ATP8P03928 68 aa5.75□□□□□ -1.49
HPS4-204ENST00000422379 LCE2AQ5TA79 106 aaPredicted RBP5.75□□□□□ -1.49
HPS4-204ENST00000422379 NDUFC2-KCTD14E9PQ53 114 aa5.74□□□□□ -1.49
HPS4-204ENST00000422379 PANO1I0J062 215 aa5.74□□□□□ -1.49
HPS4-204ENST00000422379 RPL18AQ02543 176 aaKnown RBP5.74□□□□□ -1.49
HPS4-204ENST00000422379 S100A7L2Q5SY68 101 aa5.74□□□□□ -1.49
HPS4-204ENST00000422379 EPPK1P58107 5090 aaKnown RBP5.74□□□□□ -1.49
HPS4-204ENST00000422379 SNCGO76070 127 aa5.74□□□□□ -1.49
HPS4-204ENST00000422379 C9orf129Q5T035 196 aaKnown RBP5.74□□□□□ -1.49
HPS4-204ENST00000422379 APOBP04114 4563 aaKnown RBP5.73□□□□□ -1.49
HPS4-204ENST00000422379 IGLV6-57P01721 117 aa5.73□□□□□ -1.49
HPS4-204ENST00000422379 BAALC-AS2P0C853 105 aa5.73□□□□□ -1.49
HPS4-204ENST00000422379 XGP55808 180 aa5.73□□□□□ -1.49
HPS4-204ENST00000422379 KRTAP7-1Q8IUC3 87 aa5.73□□□□□ -1.49
HPS4-204ENST00000422379 C9orf163Q8N9P6 203 aa5.73□□□□□ -1.49
HPS4-204ENST00000422379 C22orf24Q9Y442 160 aa5.73□□□□□ -1.49
HPS4-204ENST00000422379 A0A096LNI7 61 aa5.72□□□□□ -1.49
HPS4-204ENST00000422379 DNAL4O96015 105 aa5.72□□□□□ -1.49
HPS4-204ENST00000422379 TLX1NBP0CAT3 122 aa5.72□□□□□ -1.49
HPS4-204ENST00000422379 CHTF8P0CG12 524 aa5.72□□□□□ -1.49
HPS4-204ENST00000422379 GAGE2EQ4V326 116 aa5.72□□□□□ -1.49
HPS4-204ENST00000422379 C6orf99Q4VX62 202 aa5.72□□□□□ -1.49
HPS4-204ENST00000422379 SDIM1Q6ZPB5 146 aa5.72□□□□□ -1.49
HPS4-204ENST00000422379 GAGE2DQ9UEU5 116 aa5.72□□□□□ -1.49
HPS4-204ENST00000422379 FAM168BA1KXE4 195 aa5.72□□□□□ -1.49
HPS4-204ENST00000422379 VPREB1P12018 145 aa5.72□□□□□ -1.49
HPS4-204ENST00000422379 GAGE2BQ13066 116 aa5.71□□□□□ -1.5
HPS4-204ENST00000422379 TRBV10-3A0A0K0K1G6 114 aa5.7□□□□□ -1.5
HPS4-204ENST00000422379 A0A1B0GVY2 172 aa5.7□□□□□ -1.5
HPS4-204ENST00000422379 SERTAD4-AS1Q5TG53 156 aa5.7□□□□□ -1.5
HPS4-204ENST00000422379 ANAPC13Q9BS18 74 aa5.7□□□□□ -1.5
HPS4-204ENST00000422379 PKIGQ9Y2B9 76 aa5.7□□□□□ -1.5
HPS4-204ENST00000422379 IGKV2-24A0A0C4DH68 120 aa5.7□□□□□ -1.5
HPS4-204ENST00000422379 LOC107984640A0A0U1RRK4 108 aa5.7□□□□□ -1.5
HPS4-204ENST00000422379 LINC00336Q6ZUF6 198 aa5.7□□□□□ -1.5
HPS4-204ENST00000422379 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.7□□□□□ -1.5
HPS4-204ENST00000422379 IGLV5-52A0A0A0MRZ9 124 aa5.69□□□□□ -1.5
HPS4-204ENST00000422379 A0A1B0GX51 115 aa5.69□□□□□ -1.5
HPS4-204ENST00000422379 LINC00167Q96N53 147 aa5.69□□□□□ -1.5
HPS4-204ENST00000422379 TRAV23DV6A0A075B6W5 121 aa5.68□□□□□ -1.5
HPS4-204ENST00000422379 A0A1W2PNN7 141 aa5.68□□□□□ -1.5
HPS4-204ENST00000422379 C16orf90A8MZG2 172 aa5.68□□□□□ -1.5
HPS4-204ENST00000422379 M0R378 163 aa5.68□□□□□ -1.5
HPS4-204ENST00000422379 KRTAP10-1P60331 282 aa5.68□□□□□ -1.5
HPS4-204ENST00000422379 FAM30AQ9NZY2 134 aa5.68□□□□□ -1.5
HPS4-204ENST00000422379 FAT1Q14517 4588 aa5.67□□□□□ -1.5
HPS4-204ENST00000422379 LINC00575Q6W349 94 aa5.67□□□□□ -1.5
HPS4-204ENST00000422379 NKAPP1Q8N9T2 125 aa5.67□□□□□ -1.5
HPS4-204ENST00000422379 DIRC1Q969H9 104 aa5.67□□□□□ -1.5
HPS4-204ENST00000422379 ORMDL1Q9P0S3 153 aa5.67□□□□□ -1.5
HPS4-204ENST00000422379 SRRM2Q9UQ35 2752 aaKnown RBP5.67□□□□□ -1.5
HPS4-204ENST00000422379 ZNF73O43830 326 aaPredicted RBP5.66□□□□□ -1.5
HPS4-204ENST00000422379 Q6Q795 121 aa5.66□□□□□ -1.5
HPS4-204ENST00000422379 PLA2G2DQ9UNK4 145 aa5.66□□□□□ -1.5
HPS4-204ENST00000422379 ACYP1P07311 99 aa5.66□□□□□ -1.5
HPS4-204ENST00000422379 SPACA4Q8TDM5 124 aa5.66□□□□□ -1.5
HPS4-204ENST00000422379 FAM240AA0A1B0GVK7 77 aa5.65□□□□□ -1.51
HPS4-204ENST00000422379 FAM19A5Q7Z5A7 132 aaPredicted RBP5.65□□□□□ -1.51
HPS4-204ENST00000422379 hADV29S1A0JD25 119 aa5.64□□□□□ -1.51
HPS4-204ENST00000422379 INAFM2P0DMQ5 153 aa5.64□□□□□ -1.51
HPS4-204ENST00000422379 HAMPP81172 84 aa5.64□□□□□ -1.51
HPS4-204ENST00000422379 KRTAP11-1Q8IUC1 163 aa5.64□□□□□ -1.51
HPS4-204ENST00000422379 OBSCN-AS1Q96MR7 158 aa5.64□□□□□ -1.51
HPS4-204ENST00000422379 C7orf33Q8WU49 177 aa5.64□□□□□ -1.51
HPS4-204ENST00000422379 HSPG2P98160 4391 aa5.64□□□□□ -1.51
HPS4-204ENST00000422379 VPS13BQ7Z7G8 4022 aa5.64□□□□□ -1.51
HPS4-204ENST00000422379 IGLV5-37A0A075B6J1 123 aa5.63□□□□□ -1.51
HPS4-204ENST00000422379 COX7BP24311 80 aa5.63□□□□□ -1.51
HPS4-204ENST00000422379 NDUFV3P56181 108 aaKnown RBP5.63□□□□□ -1.51
HPS4-204ENST00000422379 ELOF1P60002 83 aaKnown RBP5.63□□□□□ -1.51
HPS4-204ENST00000422379 TRBV7-6A0A0J9YX20 115 aa5.62□□□□□ -1.51
HPS4-204ENST00000422379 EPM2AB3EWF7 344 aa5.62□□□□□ -1.51
HPS4-204ENST00000422379 TMEM256-PLSCR3K7ERE1 68 aa5.62□□□□□ -1.51
HPS4-204ENST00000422379 Q6ZSA8 131 aa5.62□□□□□ -1.51
HPS4-204ENST00000422379 C14orf132Q9NPU4 83 aa5.62□□□□□ -1.51
HPS4-204ENST00000422379 Q6ZQY7 126 aa5.62□□□□□ -1.51
HPS4-204ENST00000422379 PHF5AQ7RTV0 110 aaKnown RBP5.62□□□□□ -1.51
HPS4-204ENST00000422379 LINC00474Q9P2X8 69 aa5.62□□□□□ -1.51
HPS4-204ENST00000422379 KIAA1109Q2LD37 5005 aa5.61□□□□□ -1.51
HPS4-204ENST00000422379 LORP23490 312 aaPredicted RBP5.61□□□□□ -1.51
HPS4-204ENST00000422379 KCNQ1DNQ9H478 68 aa5.61□□□□□ -1.51
HPS4-204ENST00000422379 RPL37AP8A6NKH3 93 aa5.6□□□□□ -1.51
HPS4-204ENST00000422379 GAGE2AQ6NT46 116 aa5.6□□□□□ -1.51
HPS4-204ENST00000422379 MRPL55Q7Z7F7 128 aaKnown RBP5.6□□□□□ -1.51
HPS4-204ENST00000422379 CIRBP-AS1Q8TBR5 109 aa5.6□□□□□ -1.51
HPS4-204ENST00000422379 RYR1P21817 5038 aa5.59□□□□□ -1.51
HPS4-204ENST00000422379 JMJD7-PLA2G4BH0Y9G9 81 aa5.59□□□□□ -1.51
HPS4-204ENST00000422379 SCXQ7RTU7 201 aa5.59□□□□□ -1.51
HPS4-204ENST00000422379 PLAC8Q9NZF1 115 aa5.59□□□□□ -1.51
HPS4-204ENST00000422379 IGLV1-50A0A075B6I6 118 aa5.58□□□□□ -1.52
HPS4-204ENST00000422379 PRYO14603 147 aa5.58□□□□□ -1.52
HPS4-204ENST00000422379 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.58□□□□□ -1.52
HPS4-204ENST00000422379 SMCR5Q8TEV8 140 aa5.58□□□□□ -1.52
HPS4-204ENST00000422379 IMUPQ9GZP8 106 aa5.58□□□□□ -1.52
HPS4-204ENST00000422379 B5MCH6 92 aa5.58□□□□□ -1.52
HPS4-204ENST00000422379 DPH3Q96FX2 82 aa5.58□□□□□ -1.52
HPS4-204ENST00000422379 TRBV7-7A0A0K0K1E9 115 aa5.57□□□□□ -1.52
HPS4-204ENST00000422379 LINC00643Q86TS7 51 aa5.57□□□□□ -1.52
HPS4-204ENST00000422379 KRTAP4-16G5E9R7 235 aaPredicted RBP5.56□□□□□ -1.52
HPS4-204ENST00000422379 SPRR1AP35321 89 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms