RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 DEFB123Q8N688 67 aa2.93□□□□□ -1.94
RFC4-204ENST00000417876 BRK1Q8WUW1 75 aa2.93□□□□□ -1.94
RFC4-204ENST00000417876 NOP10Q9NPE3 64 aaKnown RBP2.93□□□□□ -1.94
RFC4-204ENST00000417876 DMXL1Q9Y485 3027 aa2.93□□□□□ -1.94
RFC4-204ENST00000417876 EP300Q09472 2414 aaPredicted RBP2.92□□□□□ -1.94
RFC4-204ENST00000417876 LRBAP50851 2863 aa2.92□□□□□ -1.94
RFC4-204ENST00000417876 ANKRD11Q6UB99 2663 aaPredicted RBP2.92□□□□□ -1.94
RFC4-204ENST00000417876 GVQW2A0A096LPI5 108 aaPredicted RBP2.92□□□□□ -1.94
RFC4-204ENST00000417876 TRGV4A0A0C4DH28 118 aa2.92□□□□□ -1.94
RFC4-204ENST00000417876 COX7BP24311 80 aa2.92□□□□□ -1.94
RFC4-204ENST00000417876 FUSP35637 526 aaKnown RBP eCLIP2.92□□□□□ -1.94
RFC4-204ENST00000417876 DEFB136Q30KP8 78 aa2.92□□□□□ -1.94
RFC4-204ENST00000417876 Q6ZQY7 126 aa2.92□□□□□ -1.94
RFC4-204ENST00000417876 CYP4F30PQ9H0H9 118 aa2.92□□□□□ -1.94
RFC4-204ENST00000417876 PTPRQQ9UMZ3 2332 aa2.92□□□□□ -1.94
RFC4-204ENST00000417876 MAP1BP46821 2468 aaKnown RBP2.92□□□□□ -1.94
RFC4-204ENST00000417876 SPTBN1Q01082 2364 aaKnown RBP2.92□□□□□ -1.94
RFC4-204ENST00000417876 AKAP13Q12802 2813 aa2.91□□□□□ -1.94
RFC4-204ENST00000417876 IGKV3OR2-268A0A0C4DH90 116 aa2.91□□□□□ -1.94
RFC4-204ENST00000417876 B4DSR2 109 aa2.91□□□□□ -1.94
RFC4-204ENST00000417876 ELOF1P60002 83 aaKnown RBP2.91□□□□□ -1.94
RFC4-204ENST00000417876 C9orf116Q5BN46 136 aaPredicted RBP2.91□□□□□ -1.94
RFC4-204ENST00000417876 SCXQ7RTU7 201 aa2.91□□□□□ -1.94
RFC4-204ENST00000417876 LAMTOR3Q9UHA4 124 aa2.91□□□□□ -1.94
RFC4-204ENST00000417876 CR1P17927 2039 aa2.91□□□□□ -1.94
RFC4-204ENST00000417876 COL6A6A6NMZ7 2263 aa2.9□□□□□ -1.94
RFC4-204ENST00000417876 ASPMQ8IZT6 3477 aa2.9□□□□□ -1.94
RFC4-204ENST00000417876 PMAIP1Q13794 54 aa2.9□□□□□ -1.95
RFC4-204ENST00000417876 DYNLRB2Q8TF09 96 aa2.9□□□□□ -1.95
RFC4-204ENST00000417876 HIGD2AQ9BW72 106 aa2.9□□□□□ -1.95
RFC4-204ENST00000417876 ATMQ13315 3056 aa2.89□□□□□ -1.95
RFC4-204ENST00000417876 SORL1Q92673 2214 aa2.89□□□□□ -1.95
RFC4-204ENST00000417876 CELSR1Q9NYQ6 3014 aa2.89□□□□□ -1.95
RFC4-204ENST00000417876 A0A1B0GW54 56 aa2.89□□□□□ -1.95
RFC4-204ENST00000417876 CMC4P56277 68 aaPredicted RBP2.89□□□□□ -1.95
RFC4-204ENST00000417876 ACACAQ13085 2346 aa2.89□□□□□ -1.95
RFC4-204ENST00000417876 UNQ6190/PRO20217Q6UXQ8 127 aa2.89□□□□□ -1.95
RFC4-204ENST00000417876 DIRC1Q969H9 104 aa2.89□□□□□ -1.95
RFC4-204ENST00000417876 IGLV5-48A0A075B6I7 105 aa2.88□□□□□ -1.95
RFC4-204ENST00000417876 PSPHP1O15172 72 aa2.88□□□□□ -1.95
RFC4-204ENST00000417876 ZNF73O43830 326 aaPredicted RBP2.88□□□□□ -1.95
RFC4-204ENST00000417876 CD164Q04900 197 aa2.88□□□□□ -1.95
RFC4-204ENST00000417876 LINC00269Q8N2A0 174 aa2.88□□□□□ -1.95
RFC4-204ENST00000417876 C1orf64Q8NEQ6 169 aa2.88□□□□□ -1.95
RFC4-204ENST00000417876 CCL19Q99731 98 aa2.88□□□□□ -1.95
RFC4-204ENST00000417876 PTPRZ1P23471 2315 aaPredicted RBP2.88□□□□□ -1.95
RFC4-204ENST00000417876 ASH1LQ9NR48 2969 aaKnown RBP2.88□□□□□ -1.95
RFC4-204ENST00000417876 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.87□□□□□ -1.953e-9■■■■■ 70.6
RFC4-204ENST00000417876 TLN1Q9Y490 2541 aaKnown RBP2.87□□□□□ -1.95
RFC4-204ENST00000417876 TRAV22A0A0B4J277 110 aa2.87□□□□□ -1.95
RFC4-204ENST00000417876 RTL8CO15255 209 aa2.87□□□□□ -1.95
RFC4-204ENST00000417876 SPAG11BQ08648 103 aa2.87□□□□□ -1.95
RFC4-204ENST00000417876 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
RFC4-204ENST00000417876 C6orf48Q9UBA6 75 aa2.87□□□□□ -1.95
RFC4-204ENST00000417876 MUC3AQ02505 3323 aa2.87□□□□□ -1.95
RFC4-204ENST00000417876 SPTAN1Q13813 2472 aaKnown RBP2.86□□□□□ -1.95
RFC4-204ENST00000417876 A0A1W2PNM2 257 aa2.86□□□□□ -1.95
RFC4-204ENST00000417876 PSCAO43653 123 aa2.86□□□□□ -1.95
RFC4-204ENST00000417876 IGLV1-51P01701 117 aa2.86□□□□□ -1.95
RFC4-204ENST00000417876 Q5VV11 94 aa2.86□□□□□ -1.95
RFC4-204ENST00000417876 KRTAP26-1Q6PEX3 210 aa2.86□□□□□ -1.95
RFC4-204ENST00000417876 CLPSL2Q6UWE3 100 aa2.86□□□□□ -1.95
RFC4-204ENST00000417876 WFDC10AQ9H1F0 79 aa2.86□□□□□ -1.95
RFC4-204ENST00000417876 BDP1A6H8Y1 2624 aa2.85□□□□□ -1.95
RFC4-204ENST00000417876 ETDCA0A1B0GVM5 59 aa2.85□□□□□ -1.95
RFC4-204ENST00000417876 M0R378 163 aa2.85□□□□□ -1.95
RFC4-204ENST00000417876 SPRR4Q96PI1 79 aa2.85□□□□□ -1.95
RFC4-204ENST00000417876 PRO0255Q9UI72 69 aa2.85□□□□□ -1.95
RFC4-204ENST00000417876 LINC00588Q9Y4M8 146 aa2.85□□□□□ -1.95
RFC4-204ENST00000417876 ZNF292O60281 2723 aa2.84□□□□□ -1.95
RFC4-204ENST00000417876 RELNP78509 3460 aa2.84□□□□□ -1.95
RFC4-204ENST00000417876 ZFHX3Q15911 3703 aa2.84□□□□□ -1.95
RFC4-204ENST00000417876 A8MUU9 505 aa2.84□□□□□ -1.95
RFC4-204ENST00000417876 DAD1P61803 113 aa2.84□□□□□ -1.95
RFC4-204ENST00000417876 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
RFC4-204ENST00000417876 SPANXA2-OT1Q8N9U9 137 aa2.84□□□□□ -1.95
RFC4-204ENST00000417876 ST20-AS1Q8NBB2 130 aa2.84□□□□□ -1.95
RFC4-204ENST00000417876 IGHV6-1A0A0B4J1U7 121 aa2.83□□□□□ -1.96
RFC4-204ENST00000417876 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
RFC4-204ENST00000417876 A8MUN3 132 aa2.83□□□□□ -1.96
RFC4-204ENST00000417876 KPRPQ5T749 579 aaPredicted RBP2.83□□□□□ -1.96
RFC4-204ENST00000417876 Q9BRP9 147 aa2.83□□□□□ -1.96
RFC4-204ENST00000417876 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
RFC4-204ENST00000417876 KCNQ1DNQ9H478 68 aa2.83□□□□□ -1.96
RFC4-204ENST00000417876 SVEP1Q4LDE5 3571 aa2.83□□□□□ -1.96
RFC4-204ENST00000417876 WNK1Q9H4A3 2382 aa2.82□□□□□ -1.96
RFC4-204ENST00000417876 IGLV10-54A0A075B6I4 117 aa2.82□□□□□ -1.96
RFC4-204ENST00000417876 LOC101927531A0A1B0GV80 90 aa2.82□□□□□ -1.96
RFC4-204ENST00000417876 A6NN06 94 aa2.82□□□□□ -1.96
RFC4-204ENST00000417876 C16orf90A8MZG2 172 aa2.82□□□□□ -1.96
RFC4-204ENST00000417876 ANGP03950 147 aaKnown RBP2.82□□□□□ -1.96
RFC4-204ENST00000417876 DEFB130BP0DP73 79 aa2.82□□□□□ -1.96
RFC4-204ENST00000417876 DEFB130AP0DP74 79 aa2.82□□□□□ -1.96
RFC4-204ENST00000417876 SPRR1AP35321 89 aa2.82□□□□□ -1.96
RFC4-204ENST00000417876 LELP1Q5T871 98 aa2.82□□□□□ -1.96
RFC4-204ENST00000417876 XAGE1AQ9HD64 81 aa2.82□□□□□ -1.96
RFC4-204ENST00000417876 PLAC8Q9NZF1 115 aa2.82□□□□□ -1.96
RFC4-204ENST00000417876 C2CD3Q4AC94 2353 aa2.82□□□□□ -1.96
RFC4-204ENST00000417876 CREBBPQ92793 2442 aa2.82□□□□□ -1.96
RFC4-204ENST00000417876 LAMA5O15230 3695 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms