RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 CHTF8P0CG12 524 aa6.46□□□□□ -1.38
LINC01643-201ENST00000412218 TEN1Q86WV5 123 aa6.46□□□□□ -1.38
LINC01643-201ENST00000412218 RNF151Q2KHN1 245 aa6.45□□□□□ -1.38
LINC01643-201ENST00000412218 LINC00337Q8N6G1 96 aa6.45□□□□□ -1.38
LINC01643-201ENST00000412218 PPDPFLQ8WWR9 84 aa6.45□□□□□ -1.38
LINC01643-201ENST00000412218 C2orf48Q96LS8 159 aa6.45□□□□□ -1.38
LINC01643-201ENST00000412218 CARD19Q96LW7 228 aa6.45□□□□□ -1.38
LINC01643-201ENST00000412218 A0A087WYN8 130 aa6.44□□□□□ -1.38
LINC01643-201ENST00000412218 ZNF561-AS1K7EIQ3 104 aa6.44□□□□□ -1.38
LINC01643-201ENST00000412218 OXTP01178 125 aa6.44□□□□□ -1.38
LINC01643-201ENST00000412218 TRACP01848 142 aa6.44□□□□□ -1.38
LINC01643-201ENST00000412218 ANKRD29Q8N6D5 301 aa6.44□□□□□ -1.38
LINC01643-201ENST00000412218 CLEC2BQ92478 149 aa6.44□□□□□ -1.38
LINC01643-201ENST00000412218 VPS25Q9BRG1 176 aa6.44□□□□□ -1.38
LINC01643-201ENST00000412218 H0YGX0 51 aa6.43□□□□□ -1.38
LINC01643-201ENST00000412218 LCE2CQ5TA81 110 aa6.43□□□□□ -1.38
LINC01643-201ENST00000412218 UNQ6190/PRO20217Q6UXQ8 127 aa6.43□□□□□ -1.38
LINC01643-201ENST00000412218 PLAC8Q9NZF1 115 aa6.43□□□□□ -1.38
LINC01643-201ENST00000412218 FLG2Q5D862 2391 aaPredicted RBP6.43□□□□□ -1.38
LINC01643-201ENST00000412218 DMBT1Q9UGM3 2413 aaPredicted RBP6.42□□□□□ -1.38
LINC01643-201ENST00000412218 OR13C6PQ8NH95 151 aa6.42□□□□□ -1.38
LINC01643-201ENST00000412218 SMIM11BQ8TCY0 68 aa6.42□□□□□ -1.38
LINC01643-201ENST00000412218 CAMK2N2Q96S95 79 aa6.42□□□□□ -1.38
LINC01643-201ENST00000412218 C10orf25Q5T742 122 aa6.41□□□□□ -1.38
LINC01643-201ENST00000412218 DPH3Q96FX2 82 aa6.41□□□□□ -1.38
LINC01643-201ENST00000412218 TMEM126AQ9H061 195 aa6.41□□□□□ -1.38
LINC01643-201ENST00000412218 C6orf48Q9UBA6 75 aa6.41□□□□□ -1.38
LINC01643-201ENST00000412218 A0A096LNI7 61 aa6.4□□□□□ -1.38
LINC01643-201ENST00000412218 IGKV2-24A0A0C4DH68 120 aa6.4□□□□□ -1.38
LINC01643-201ENST00000412218 C9orf116Q5BN46 136 aaPredicted RBP6.4□□□□□ -1.38
LINC01643-201ENST00000412218 LINC00526Q96FQ7 95 aa6.4□□□□□ -1.38
LINC01643-201ENST00000412218 A0A1B0GX51 115 aa6.39□□□□□ -1.39
LINC01643-201ENST00000412218 DNAL4O96015 105 aa6.39□□□□□ -1.39
LINC01643-201ENST00000412218 PKIGQ9Y2B9 76 aa6.39□□□□□ -1.39
LINC01643-201ENST00000412218 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
LINC01643-201ENST00000412218 LRP1Q07954 4544 aaKnown RBP6.38□□□□□ -1.39
LINC01643-201ENST00000412218 S100A7L2Q5SY68 101 aa6.38□□□□□ -1.39
LINC01643-201ENST00000412218 C7orf33Q8WU49 177 aa6.38□□□□□ -1.39
LINC01643-201ENST00000412218 LINC00474Q9P2X8 69 aa6.38□□□□□ -1.39
LINC01643-201ENST00000412218 FAT3Q8TDW7 4589 aa6.38□□□□□ -1.39
LINC01643-201ENST00000412218 NDUFC2-KCTD14E9PQ53 114 aa6.37□□□□□ -1.39
LINC01643-201ENST00000412218 NCR3O14931 201 aa6.37□□□□□ -1.39
LINC01643-201ENST00000412218 SYCNQ0VAF6 134 aa6.37□□□□□ -1.39
LINC01643-201ENST00000412218 Q6ZRU5 148 aa6.37□□□□□ -1.39
LINC01643-201ENST00000412218 SNCGO76070 127 aa6.36□□□□□ -1.39
LINC01643-201ENST00000412218 SERTAD4-AS1Q5TG53 156 aa6.36□□□□□ -1.39
LINC01643-201ENST00000412218 FAM218AQ96MZ4 157 aa6.36□□□□□ -1.39
LINC01643-201ENST00000412218 MT1HL1P0DM35 61 aa6.35□□□□□ -1.39
LINC01643-201ENST00000412218 PRR3P79522 188 aaKnown RBP6.35□□□□□ -1.39
LINC01643-201ENST00000412218 LOC107984640A0A0U1RRK4 108 aa6.34□□□□□ -1.39
LINC01643-201ENST00000412218 IGLV6-57P01721 117 aa6.34□□□□□ -1.39
LINC01643-201ENST00000412218 BAALC-AS2P0C853 105 aa6.34□□□□□ -1.39
LINC01643-201ENST00000412218 PCP4P48539 62 aa6.34□□□□□ -1.39
LINC01643-201ENST00000412218 TLX1NBP0CAT3 122 aa6.33□□□□□ -1.4
LINC01643-201ENST00000412218 SCGB1A1P11684 91 aa6.33□□□□□ -1.4
LINC01643-201ENST00000412218 RPL18AQ02543 176 aaKnown RBP6.33□□□□□ -1.4
LINC01643-201ENST00000412218 Q8NDZ9 215 aa6.33□□□□□ -1.4
LINC01643-201ENST00000412218 TEX49A0A1B0GTD5 131 aa6.32□□□□□ -1.4
LINC01643-201ENST00000412218 M0R378 163 aa6.32□□□□□ -1.4
LINC01643-201ENST00000412218 VPREB1P12018 145 aa6.32□□□□□ -1.4
LINC01643-201ENST00000412218 GAGE2BQ13066 116 aa6.32□□□□□ -1.4
LINC01643-201ENST00000412218 C6orf99Q4VX62 202 aa6.32□□□□□ -1.4
LINC01643-201ENST00000412218 LINC00167Q96N53 147 aa6.32□□□□□ -1.4
LINC01643-201ENST00000412218 XAGE1AQ9HD64 81 aa6.32□□□□□ -1.4
LINC01643-201ENST00000412218 HMCN2Q8NDA2 5059 aa6.32□□□□□ -1.4
LINC01643-201ENST00000412218 TRAV23DV6A0A075B6W5 121 aa6.31□□□□□ -1.4
LINC01643-201ENST00000412218 FAM240AA0A1B0GVK7 77 aa6.31□□□□□ -1.4
LINC01643-201ENST00000412218 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
LINC01643-201ENST00000412218 DIRC1Q969H9 104 aa6.31□□□□□ -1.4
LINC01643-201ENST00000412218 SIGMAR1Q99720 223 aa6.31□□□□□ -1.4
LINC01643-201ENST00000412218 ORMDL1Q9P0S3 153 aa6.31□□□□□ -1.4
LINC01643-201ENST00000412218 TRBV7-6A0A0J9YX20 115 aa6.3□□□□□ -1.4
LINC01643-201ENST00000412218 A0A1W2PNN7 141 aa6.3□□□□□ -1.4
LINC01643-201ENST00000412218 H3BQ85 93 aa6.3□□□□□ -1.4
LINC01643-201ENST00000412218 PLA2G2DQ9UNK4 145 aa6.3□□□□□ -1.4
LINC01643-201ENST00000412218 TRBV10-3A0A0K0K1G6 114 aa6.29□□□□□ -1.4
LINC01643-201ENST00000412218 GAGE2EQ4V326 116 aa6.29□□□□□ -1.4
LINC01643-201ENST00000412218 Q6ZRP5 223 aa6.29□□□□□ -1.4
LINC01643-201ENST00000412218 CDIP1Q9H305 208 aa6.29□□□□□ -1.4
LINC01643-201ENST00000412218 GAGE2DQ9UEU5 116 aa6.29□□□□□ -1.4
LINC01643-201ENST00000412218 GHRHP01286 108 aa6.28□□□□□ -1.4
LINC01643-201ENST00000412218 ACYP1P07311 99 aa6.28□□□□□ -1.4
LINC01643-201ENST00000412218 SPINK6Q6UWN8 80 aa6.28□□□□□ -1.4
LINC01643-201ENST00000412218 LINC00575Q6W349 94 aa6.28□□□□□ -1.4
LINC01643-201ENST00000412218 NKAPP1Q8N9T2 125 aa6.28□□□□□ -1.4
LINC01643-201ENST00000412218 IGLV5-37A0A075B6J1 123 aa6.27□□□□□ -1.41
LINC01643-201ENST00000412218 TMEM256-PLSCR3K7ERE1 68 aa6.27□□□□□ -1.41
LINC01643-201ENST00000412218 ZNF73O43830 326 aaPredicted RBP6.27□□□□□ -1.41
LINC01643-201ENST00000412218 COX7BP24311 80 aa6.27□□□□□ -1.41
LINC01643-201ENST00000412218 C4orf48Q5BLP8 95 aa6.27□□□□□ -1.41
LINC01643-201ENST00000412218 hADV29S1A0JD25 119 aa6.26□□□□□ -1.41
LINC01643-201ENST00000412218 C9orf129Q5T035 196 aaKnown RBP6.26□□□□□ -1.41
LINC01643-201ENST00000412218 C22orf24Q9Y442 160 aa6.26□□□□□ -1.41
LINC01643-201ENST00000412218 JMJD7-PLA2G4BH0Y9G9 81 aa6.25□□□□□ -1.41
LINC01643-201ENST00000412218 ELOF1P60002 83 aaKnown RBP6.25□□□□□ -1.41
LINC01643-201ENST00000412218 REG3GQ6UW15 175 aa6.25□□□□□ -1.41
LINC01643-201ENST00000412218 PHF5AQ7RTV0 110 aaKnown RBP6.25□□□□□ -1.41
LINC01643-201ENST00000412218 OBSCN-AS1Q96MR7 158 aa6.25□□□□□ -1.41
LINC01643-201ENST00000412218 PSORS1C2Q9UIG4 136 aa6.25□□□□□ -1.41
LINC01643-201ENST00000412218 FAM168BA1KXE4 195 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms