RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 FAM19A1Q7Z5A9 133 aa10.07□□□□□ -0.8
SCAMP4-202ENST00000409472 GVQW2A0A096LPI5 108 aaPredicted RBP10.06□□□□□ -0.8
SCAMP4-202ENST00000409472 LINC01556Q5JQF7 62 aa10.06□□□□□ -0.8
SCAMP4-202ENST00000409472 IGKV2D-24A0A075B6R9 120 aa10.06□□□□□ -0.8
SCAMP4-202ENST00000409472 CAMK2N2Q96S95 79 aa10.06□□□□□ -0.8
SCAMP4-202ENST00000409472 TM2D3Q9BRN9 247 aa10.06□□□□□ -0.8
SCAMP4-202ENST00000409472 ZNF561-AS1K7EIQ3 104 aa10.05□□□□□ -0.8
SCAMP4-202ENST00000409472 NDUFC1O43677 76 aa10.05□□□□□ -0.8
SCAMP4-202ENST00000409472 BRK1Q8WUW1 75 aa10.05□□□□□ -0.8
SCAMP4-202ENST00000409472 DNAH9Q9NYC9 4486 aa10.04□□□□□ -0.8
SCAMP4-202ENST00000409472 LINC00588Q9Y4M8 146 aa10.03□□□□□ -0.8
SCAMP4-202ENST00000409472 DNAH10Q8IVF4 4471 aa10.02□□□□□ -0.8
SCAMP4-202ENST00000409472 Q8N814 137 aa10.02□□□□□ -0.8
SCAMP4-202ENST00000409472 RBM3P98179 157 aaKnown RBP10.02□□□□□ -0.81
SCAMP4-202ENST00000409472 CASC10Q5T4H9 136 aa10.02□□□□□ -0.81
SCAMP4-202ENST00000409472 TRAV10A0A0B4J240 114 aa10.01□□□□□ -0.81
SCAMP4-202ENST00000409472 IGLV6-57P01721 117 aa10.01□□□□□ -0.81
SCAMP4-202ENST00000409472 TRBV7-6A0A0J9YX20 115 aa10.01□□□□□ -0.81
SCAMP4-202ENST00000409472 DNAH10OSP0CZ25 163 aa10.01□□□□□ -0.81
SCAMP4-202ENST00000409472 F8WEM9 126 aa10□□□□□ -0.81
SCAMP4-202ENST00000409472 LINC00167Q96N53 147 aa10□□□□□ -0.81
SCAMP4-202ENST00000409472 TMEM256-PLSCR3K7ERE1 68 aa9.99□□□□□ -0.81
SCAMP4-202ENST00000409472 MUC7Q8TAX7 377 aa9.99□□□□□ -0.81
SCAMP4-202ENST00000409472 A0A0U1RQV1 116 aa9.98□□□□□ -0.81
SCAMP4-202ENST00000409472 Q6ZRP5 223 aa9.98□□□□□ -0.81
SCAMP4-202ENST00000409472 VPREB1P12018 145 aa9.97□□□□□ -0.81
SCAMP4-202ENST00000409472 RMI2Q96E14 147 aa9.97□□□□□ -0.81
SCAMP4-202ENST00000409472 SNURFQ9Y675 71 aa9.97□□□□□ -0.81
SCAMP4-202ENST00000409472 CSMD3Q7Z407 3707 aa9.97□□□□□ -0.81
SCAMP4-202ENST00000409472 TENM2Q9NT68 2774 aa9.96□□□□□ -0.81
SCAMP4-202ENST00000409472 LINC00575Q6W349 94 aa9.96□□□□□ -0.81
SCAMP4-202ENST00000409472 MDFIQ99750 246 aa9.96□□□□□ -0.82
SCAMP4-202ENST00000409472 LINC00474Q9P2X8 69 aa9.95□□□□□ -0.82
SCAMP4-202ENST00000409472 DNAH7Q8WXX0 4024 aa9.94□□□□□ -0.82
SCAMP4-202ENST00000409472 DNHD1Q96M86 4753 aa9.94□□□□□ -0.82
SCAMP4-202ENST00000409472 SYCNQ0VAF6 134 aa9.93□□□□□ -0.82
SCAMP4-202ENST00000409472 ZNF73O43830 326 aaPredicted RBP9.9□□□□□ -0.82
SCAMP4-202ENST00000409472 LINC01547P58512 204 aaPredicted RBP9.9□□□□□ -0.82
SCAMP4-202ENST00000409472 SERTAD4-AS1Q5TG53 156 aa9.9□□□□□ -0.82
SCAMP4-202ENST00000409472 Q6ZQY7 126 aa9.9□□□□□ -0.82
SCAMP4-202ENST00000409472 DIRC1Q969H9 104 aa9.9□□□□□ -0.82
SCAMP4-202ENST00000409472 DYNC2H1Q8NCM8 4307 aaKnown RBP9.89□□□□□ -0.83
SCAMP4-202ENST00000409472 CXCL6P80162 114 aa9.89□□□□□ -0.83
SCAMP4-202ENST00000409472 KRTAP1-5Q9BYS1 174 aa9.89□□□□□ -0.83
SCAMP4-202ENST00000409472 HAMPP81172 84 aa9.88□□□□□ -0.83
SCAMP4-202ENST00000409472 PLECQ15149 4684 aaKnown RBP9.88□□□□□ -0.83
SCAMP4-202ENST00000409472 LOC110117498A0A087WWA1 95 aa9.87□□□□□ -0.83
SCAMP4-202ENST00000409472 TRBV7-4A0A0J9YYF1 115 aa9.87□□□□□ -0.83
SCAMP4-202ENST00000409472 FAM168BA1KXE4 195 aa9.87□□□□□ -0.83
SCAMP4-202ENST00000409472 M0R378 163 aa9.87□□□□□ -0.83
SCAMP4-202ENST00000409472 Q6ZQT0 140 aa9.87□□□□□ -0.83
SCAMP4-202ENST00000409472 LAMTOR3Q9UHA4 124 aa9.87□□□□□ -0.83
SCAMP4-202ENST00000409472 ELOF1P60002 83 aaKnown RBP9.86□□□□□ -0.83
SCAMP4-202ENST00000409472 COX7BP24311 80 aa9.85□□□□□ -0.83
SCAMP4-202ENST00000409472 Q6ZVQ6 151 aa9.85□□□□□ -0.83
SCAMP4-202ENST00000409472 MPLKIPQ8TAP9 179 aa9.85□□□□□ -0.83
SCAMP4-202ENST00000409472 ERC2-IT1O76042 136 aa9.85□□□□□ -0.83
SCAMP4-202ENST00000409472 PRKDCP78527 4128 aaKnown RBP9.84□□□□□ -0.83
SCAMP4-202ENST00000409472 M0R2N4 97 aa9.83□□□□□ -0.84
SCAMP4-202ENST00000409472 PDE6GP18545 87 aa9.83□□□□□ -0.84
SCAMP4-202ENST00000409472 KRTAP7-1Q8IUC3 87 aa9.83□□□□□ -0.84
SCAMP4-202ENST00000409472 TMEM254Q8TBM7 123 aa9.82□□□□□ -0.84
SCAMP4-202ENST00000409472 C7orf33Q8WU49 177 aa9.82□□□□□ -0.84
SCAMP4-202ENST00000409472 PRR15Q8IV56 129 aa9.82□□□□□ -0.84
SCAMP4-202ENST00000409472 PMAIP1Q13794 54 aa9.81□□□□□ -0.84
SCAMP4-202ENST00000409472 NREPQ16612 68 aa9.81□□□□□ -0.84
SCAMP4-202ENST00000409472 LINC00528Q8N1L1 170 aa9.81□□□□□ -0.84
SCAMP4-202ENST00000409472 RPL37AP8A6NKH3 93 aa9.8□□□□□ -0.84
SCAMP4-202ENST00000409472 FAM229BQ4G0N7 80 aa9.8□□□□□ -0.84
SCAMP4-202ENST00000409472 NKAPP1Q8N9T2 125 aa9.8□□□□□ -0.84
SCAMP4-202ENST00000409472 STARD9Q9P2P6 4700 aa9.79□□□□□ -0.84
SCAMP4-202ENST00000409472 TLX1NBP0CAT3 122 aa9.79□□□□□ -0.84
SCAMP4-202ENST00000409472 MEGF8Q7Z7M0 2845 aa9.77□□□□□ -0.85
SCAMP4-202ENST00000409472 H3BQ85 93 aa9.77□□□□□ -0.85
SCAMP4-202ENST00000409472 APLNQ9ULZ1 77 aa9.77□□□□□ -0.85
SCAMP4-202ENST00000409472 PRYO14603 147 aa9.77□□□□□ -0.85
SCAMP4-202ENST00000409472 FUSP35637 526 aaKnown RBP eCLIP9.77□□□□□ -0.85
SCAMP4-202ENST00000409472 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.76□□□□□ -0.85
SCAMP4-202ENST00000409472 BPY2O14599 106 aa9.75□□□□□ -0.85
SCAMP4-202ENST00000409472 KCNQ1DNQ9H478 68 aa9.75□□□□□ -0.85
SCAMP4-202ENST00000409472 B9D2Q9BPU9 175 aa9.75□□□□□ -0.85
SCAMP4-202ENST00000409472 UBE2DNLQ8IWF7 75 aa9.74□□□□□ -0.85
SCAMP4-202ENST00000409472 PLA2G2DQ9UNK4 145 aa9.72□□□□□ -0.85
SCAMP4-202ENST00000409472 IGLV1-50A0A075B6I6 118 aa9.71□□□□□ -0.86
SCAMP4-202ENST00000409472 Q9BRP9 147 aa9.71□□□□□ -0.86
SCAMP4-202ENST00000409472 KRTAP4-16G5E9R7 235 aaPredicted RBP9.7□□□□□ -0.86
SCAMP4-202ENST00000409472 IGLV5-37A0A075B6J1 123 aa9.7□□□□□ -0.86
SCAMP4-202ENST00000409472 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.7□□□□□ -0.86
SCAMP4-202ENST00000409472 A0A096LNI7 61 aa9.7□□□□□ -0.86
SCAMP4-202ENST00000409472 DEFB105AQ8NG35 78 aa9.69□□□□□ -0.86
SCAMP4-202ENST00000409472 VPS13DQ5THJ4 4388 aa9.69□□□□□ -0.86
SCAMP4-202ENST00000409472 IGKV2-24A0A0C4DH68 120 aa9.68□□□□□ -0.86
SCAMP4-202ENST00000409472 PSCAO43653 123 aa9.68□□□□□ -0.86
SCAMP4-202ENST00000409472 MRPL55Q7Z7F7 128 aaKnown RBP9.68□□□□□ -0.86
SCAMP4-202ENST00000409472 CD164Q04900 197 aa9.67□□□□□ -0.86
SCAMP4-202ENST00000409472 Q6ZRX8 168 aa9.67□□□□□ -0.86
SCAMP4-202ENST00000409472 SCXQ7RTU7 201 aa9.67□□□□□ -0.86
SCAMP4-202ENST00000409472 Q1T7F1 81 aa9.67□□□□□ -0.86
SCAMP4-202ENST00000409472 SPRR1AP35321 89 aa9.66□□□□□ -0.86
SCAMP4-202ENST00000409472 ST20-AS1Q8NBB2 130 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms