RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 M0R2N4 97 aa3.58□□□□□ -1.84
VPS41-203ENST00000395969 LAMTOR3Q9UHA4 124 aa3.58□□□□□ -1.84
VPS41-203ENST00000395969 NIPBLQ6KC79 2804 aaeCLIP3.58□□□□□ -1.84
VPS41-203ENST00000395969 NF1P21359 2839 aa3.58□□□□□ -1.84
VPS41-203ENST00000395969 IGLV4-60A0A075B6I1 120 aa3.58□□□□□ -1.84
VPS41-203ENST00000395969 UBE2L6O14933 153 aa3.58□□□□□ -1.84
VPS41-203ENST00000395969 ABCA12Q86UK0 2595 aa3.58□□□□□ -1.84
VPS41-203ENST00000395969 POLQO75417 2590 aa3.58□□□□□ -1.84
VPS41-203ENST00000395969 HUWE1Q7Z6Z7 4374 aaKnown RBP3.57□□□□□ -1.84
VPS41-203ENST00000395969 REG3AQ06141 175 aa3.57□□□□□ -1.84
VPS41-203ENST00000395969 DEFB135Q30KP9 77 aa3.57□□□□□ -1.84
VPS41-203ENST00000395969 MRPL55Q7Z7F7 128 aaKnown RBP3.57□□□□□ -1.84
VPS41-203ENST00000395969 Q8N3U1 123 aa3.57□□□□□ -1.84
VPS41-203ENST00000395969 IGLV5-37A0A075B6J1 123 aa3.57□□□□□ -1.84
VPS41-203ENST00000395969 LINC00575Q6W349 94 aa3.57□□□□□ -1.84
VPS41-203ENST00000395969 B9D2Q9BPU9 175 aa3.57□□□□□ -1.84
VPS41-203ENST00000395969 K7EIL1 84 aa3.56□□□□□ -1.84
VPS41-203ENST00000395969 H3BQ85 93 aa3.56□□□□□ -1.84
VPS41-203ENST00000395969 TMEM254Q8TBM7 123 aa3.56□□□□□ -1.84
VPS41-203ENST00000395969 HIVEP1P15822 2718 aa3.56□□□□□ -1.84
VPS41-203ENST00000395969 PDE6GP18545 87 aa3.55□□□□□ -1.84
VPS41-203ENST00000395969 PRR15Q8IV56 129 aa3.55□□□□□ -1.84
VPS41-203ENST00000395969 CCDC168Q8NDH2 2452 aa3.55□□□□□ -1.84
VPS41-203ENST00000395969 SETXQ7Z333 2677 aaKnown RBP3.55□□□□□ -1.84
VPS41-203ENST00000395969 NREPQ16612 68 aa3.55□□□□□ -1.84
VPS41-203ENST00000395969 Q6ZTC4 211 aa3.55□□□□□ -1.84
VPS41-203ENST00000395969 MTORP42345 2549 aa3.55□□□□□ -1.84
VPS41-203ENST00000395969 CYSRT1A8MQ03 144 aa3.55□□□□□ -1.84
VPS41-203ENST00000395969 FUSP35637 526 aaKnown RBP eCLIP3.55□□□□□ -1.84
VPS41-203ENST00000395969 ESRGQ1W209 222 aa3.55□□□□□ -1.84
VPS41-203ENST00000395969 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.55□□□□□ -1.84
VPS41-203ENST00000395969 DNAH7Q8WXX0 4024 aa3.54□□□□□ -1.84
VPS41-203ENST00000395969 DNAH9Q9NYC9 4486 aa3.54□□□□□ -1.84
VPS41-203ENST00000395969 C6orf99Q4VX62 202 aa3.54□□□□□ -1.84
VPS41-203ENST00000395969 CLPSL2Q6UWE3 100 aa3.54□□□□□ -1.84
VPS41-203ENST00000395969 Q6ZRU5 148 aa3.54□□□□□ -1.84
VPS41-203ENST00000395969 HIGD2AQ9BW72 106 aa3.54□□□□□ -1.84
VPS41-203ENST00000395969 BPY2O14599 106 aa3.53□□□□□ -1.84
VPS41-203ENST00000395969 Q8NDZ9 215 aa3.53□□□□□ -1.84
VPS41-203ENST00000395969 CHCHD10Q8WYQ3 142 aaPredicted RBP3.53□□□□□ -1.84
VPS41-203ENST00000395969 OCR1Q9BZK8 76 aa3.53□□□□□ -1.84
VPS41-203ENST00000395969 HIVEP2P31629 2446 aa3.53□□□□□ -1.84
VPS41-203ENST00000395969 DEFB130BP0DP73 79 aa3.53□□□□□ -1.85
VPS41-203ENST00000395969 DEFB130AP0DP74 79 aa3.53□□□□□ -1.85
VPS41-203ENST00000395969 TEP1Q99973 2627 aaKnown RBP3.52□□□□□ -1.85
VPS41-203ENST00000395969 REG3GQ6UW15 175 aa3.52□□□□□ -1.85
VPS41-203ENST00000395969 PRKDCP78527 4128 aaKnown RBP3.52□□□□□ -1.85
VPS41-203ENST00000395969 IGLV6-57P01721 117 aa3.52□□□□□ -1.85
VPS41-203ENST00000395969 SEC61BP60468 96 aaKnown RBP3.52□□□□□ -1.85
VPS41-203ENST00000395969 Q1T7F1 81 aa3.52□□□□□ -1.85
VPS41-203ENST00000395969 BAHCC1Q9P281 2608 aa3.52□□□□□ -1.85
VPS41-203ENST00000395969 A8MUN3 132 aa3.51□□□□□ -1.85
VPS41-203ENST00000395969 IGKV4-1P06312 121 aa3.51□□□□□ -1.85
VPS41-203ENST00000395969 hDV103S1A0JD37 113 aa3.51□□□□□ -1.85
VPS41-203ENST00000395969 CNBPP62633 177 aaKnown RBP3.51□□□□□ -1.85
VPS41-203ENST00000395969 C15orf56Q8N910 161 aa3.51□□□□□ -1.85
VPS41-203ENST00000395969 APLNQ9ULZ1 77 aa3.51□□□□□ -1.85
VPS41-203ENST00000395969 FASNP49327 2511 aaKnown RBP3.5□□□□□ -1.85
VPS41-203ENST00000395969 LCE6AA0A183 80 aa3.5□□□□□ -1.85
VPS41-203ENST00000395969 Q6ZQY7 126 aa3.5□□□□□ -1.85
VPS41-203ENST00000395969 LINC00269Q8N2A0 174 aa3.5□□□□□ -1.85
VPS41-203ENST00000395969 RBM12B-AS1Q9P1G2 102 aa3.5□□□□□ -1.85
VPS41-203ENST00000395969 DEFB131BA0A096LNP1 70 aa3.5□□□□□ -1.85
VPS41-203ENST00000395969 TRRAPQ9Y4A5 3859 aa3.49□□□□□ -1.85
VPS41-203ENST00000395969 C9orf116Q5BN46 136 aaPredicted RBP3.49□□□□□ -1.85
VPS41-203ENST00000395969 Q6ZRP5 223 aa3.49□□□□□ -1.85
VPS41-203ENST00000395969 C8orf87E5RJ46 101 aa3.49□□□□□ -1.85
VPS41-203ENST00000395969 C3orf84H3BNL1 204 aa3.49□□□□□ -1.85
VPS41-203ENST00000395969 CHKB-CPT1BH3BT56 60 aa3.49□□□□□ -1.85
VPS41-203ENST00000395969 COX7BP24311 80 aa3.49□□□□□ -1.85
VPS41-203ENST00000395969 VPS13DQ5THJ4 4388 aa3.48□□□□□ -1.85
VPS41-203ENST00000395969 NUPR2A6NF83 97 aa3.48□□□□□ -1.85
VPS41-203ENST00000395969 ALMS1Q8TCU4 4167 aa3.48□□□□□ -1.85
VPS41-203ENST00000395969 LINC00588Q9Y4M8 146 aa3.48□□□□□ -1.85
VPS41-203ENST00000395969 FBN1P35555 2871 aaKnown RBP3.48□□□□□ -1.85
VPS41-203ENST00000395969 SPRR1AP35321 89 aa3.48□□□□□ -1.85
VPS41-203ENST00000395969 TRAV22A0A0B4J277 110 aa3.47□□□□□ -1.85
VPS41-203ENST00000395969 C1orf64Q8NEQ6 169 aa3.47□□□□□ -1.85
VPS41-203ENST00000395969 IGLV10-54A0A075B6I4 117 aa3.47□□□□□ -1.85
VPS41-203ENST00000395969 IGLV9-49A0A0B4J1Y8 123 aa3.47□□□□□ -1.85
VPS41-203ENST00000395969 C10orf25Q5T742 122 aa3.47□□□□□ -1.85
VPS41-203ENST00000395969 ZCCHC13Q8WW36 166 aaKnown RBP3.47□□□□□ -1.85
VPS41-203ENST00000395969 A0A1B0GW54 56 aa3.47□□□□□ -1.85
VPS41-203ENST00000395969 ANGP03950 147 aaKnown RBP3.47□□□□□ -1.85
VPS41-203ENST00000395969 WFDC10BQ8IUB3 73 aa3.47□□□□□ -1.85
VPS41-203ENST00000395969 C6orf48Q9UBA6 75 aa3.47□□□□□ -1.85
VPS41-203ENST00000395969 ELOF1P60002 83 aaKnown RBP3.46□□□□□ -1.86
VPS41-203ENST00000395969 DEFB116Q30KQ4 102 aa3.46□□□□□ -1.86
VPS41-203ENST00000395969 Q6ZRN7 208 aaPredicted RBP3.46□□□□□ -1.86
VPS41-203ENST00000395969 KRTAP4-16G5E9R7 235 aaPredicted RBP3.46□□□□□ -1.86
VPS41-203ENST00000395969 SPAG11BQ08648 103 aa3.46□□□□□ -1.86
VPS41-203ENST00000395969 DIRC1Q969H9 104 aa3.46□□□□□ -1.86
VPS41-203ENST00000395969 KCNQ1DNQ9H478 68 aa3.46□□□□□ -1.86
VPS41-203ENST00000395969 TENM1Q9UKZ4 2725 aa3.46□□□□□ -1.86
VPS41-203ENST00000395969 CYP4F30PQ9H0H9 118 aa3.45□□□□□ -1.86
VPS41-203ENST00000395969 KLK12Q9UKR0 248 aa3.45□□□□□ -1.86
VPS41-203ENST00000395969 MAST4O15021 2626 aa3.45□□□□□ -1.86
VPS41-203ENST00000395969 H0Y9J4 135 aa3.45□□□□□ -1.86
VPS41-203ENST00000395969 C14orf177Q52M58 125 aa3.45□□□□□ -1.86
VPS41-203ENST00000395969 DEFB105AQ8NG35 78 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms