RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 C7orf33Q8WU49 177 aa12.34□□□□□ -0.43
LMNB1-202ENST00000395354 A0A1B0GVY2 172 aa12.33□□□□□ -0.44
LMNB1-202ENST00000395354 KRTAP10-2P60368 255 aa12.33□□□□□ -0.44
LMNB1-202ENST00000395354 KCNQ1DNQ9H478 68 aa12.33□□□□□ -0.44
LMNB1-202ENST00000395354 COX7BP24311 80 aa12.32□□□□□ -0.44
LMNB1-202ENST00000395354 FUSP35637 526 aaKnown RBP eCLIP12.32□□□□□ -0.44
LMNB1-202ENST00000395354 ORMDL1Q9P0S3 153 aa12.32□□□□□ -0.44
LMNB1-202ENST00000395354 TEX49A0A1B0GTD5 131 aa12.31□□□□□ -0.44
LMNB1-202ENST00000395354 ELOF1P60002 83 aaKnown RBP12.31□□□□□ -0.44
LMNB1-202ENST00000395354 C9orf163Q8N9P6 203 aa12.31□□□□□ -0.44
LMNB1-202ENST00000395354 hADV29S1A0JD25 119 aa12.3□□□□□ -0.44
LMNB1-202ENST00000395354 IGLV5-52A0A0A0MRZ9 124 aa12.3□□□□□ -0.44
LMNB1-202ENST00000395354 FAM168BA1KXE4 195 aa12.3□□□□□ -0.44
LMNB1-202ENST00000395354 C22orf24Q9Y442 160 aa12.3□□□□□ -0.44
LMNB1-202ENST00000395354 A0A096LNI7 61 aa12.29□□□□□ -0.44
LMNB1-202ENST00000395354 KRTAP7-1Q8IUC3 87 aa12.29□□□□□ -0.44
LMNB1-202ENST00000395354 VPS25Q9BRG1 176 aa12.28□□□□□ -0.44
LMNB1-202ENST00000395354 IGLV1-50A0A075B6I6 118 aa12.27□□□□□ -0.44
LMNB1-202ENST00000395354 H3BQ85 93 aa12.27□□□□□ -0.44
LMNB1-202ENST00000395354 PRYO14603 147 aa12.27□□□□□ -0.44
LMNB1-202ENST00000395354 MRPL55Q7Z7F7 128 aaKnown RBP12.27□□□□□ -0.44
LMNB1-202ENST00000395354 TMEM256-PLSCR3K7ERE1 68 aa12.26□□□□□ -0.45
LMNB1-202ENST00000395354 PKD1P98161 4303 aa12.26□□□□□ -0.45
LMNB1-202ENST00000395354 FAM19A5Q7Z5A7 132 aaPredicted RBP12.26□□□□□ -0.45
LMNB1-202ENST00000395354 LINC00528Q8N1L1 170 aa12.25□□□□□ -0.45
LMNB1-202ENST00000395354 LINC00474Q9P2X8 69 aa12.25□□□□□ -0.45
LMNB1-202ENST00000395354 GHRHP01286 108 aa12.23□□□□□ -0.45
LMNB1-202ENST00000395354 INAFM2P0DMQ5 153 aa12.23□□□□□ -0.45
LMNB1-202ENST00000395354 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.23□□□□□ -0.45
LMNB1-202ENST00000395354 SDIM1Q6ZPB5 146 aa12.23□□□□□ -0.45
LMNB1-202ENST00000395354 IGKV2-24A0A0C4DH68 120 aa12.22□□□□□ -0.45
LMNB1-202ENST00000395354 SPRR1AP35321 89 aa12.22□□□□□ -0.45
LMNB1-202ENST00000395354 OBSCN-AS1Q96MR7 158 aa12.22□□□□□ -0.45
LMNB1-202ENST00000395354 DNAH11Q96DT5 4516 aa12.22□□□□□ -0.45
LMNB1-202ENST00000395354 RPL37AP8A6NKH3 93 aa12.2□□□□□ -0.46
LMNB1-202ENST00000395354 A0A1W2PNN7 141 aa12.19□□□□□ -0.46
LMNB1-202ENST00000395354 KRTAP4-16G5E9R7 235 aaPredicted RBP12.19□□□□□ -0.46
LMNB1-202ENST00000395354 HECTD4Q9Y4D8 3996 aa12.19□□□□□ -0.46
LMNB1-202ENST00000395354 FAM240AA0A1B0GVK7 77 aa12.18□□□□□ -0.46
LMNB1-202ENST00000395354 Q6ZQY7 126 aa12.18□□□□□ -0.46
LMNB1-202ENST00000395354 JMJD7-PLA2G4BH0Y9G9 81 aa12.18□□□□□ -0.46
LMNB1-202ENST00000395354 DHRS4-AS1Q9P1J3 65 aa12.17□□□□□ -0.46
LMNB1-202ENST00000395354 ETDCA0A1B0GVM5 59 aa12.16□□□□□ -0.46
LMNB1-202ENST00000395354 B5MCH6 92 aa12.16□□□□□ -0.46
LMNB1-202ENST00000395354 Q6ZRX8 168 aa12.16□□□□□ -0.46
LMNB1-202ENST00000395354 KRTAP10-1P60331 282 aa12.15□□□□□ -0.46
LMNB1-202ENST00000395354 ACYP1P07311 99 aa12.14□□□□□ -0.47
LMNB1-202ENST00000395354 CHTF8P0CG12 524 aa12.14□□□□□ -0.47
LMNB1-202ENST00000395354 REG3GQ6UW15 175 aa12.14□□□□□ -0.47
LMNB1-202ENST00000395354 CDIP1Q9H305 208 aa12.13□□□□□ -0.47
LMNB1-202ENST00000395354 EPM2AB3EWF7 344 aa12.11□□□□□ -0.47
LMNB1-202ENST00000395354 PKHD1P08F94 4074 aa12.11□□□□□ -0.47
LMNB1-202ENST00000395354 DNAH5Q8TE73 4624 aa12.11□□□□□ -0.47
LMNB1-202ENST00000395354 SPACA4Q8TDM5 124 aa12.1□□□□□ -0.47
LMNB1-202ENST00000395354 C14orf132Q9NPU4 83 aa12.09□□□□□ -0.47
LMNB1-202ENST00000395354 FAM30AQ9NZY2 134 aa12.08□□□□□ -0.48
LMNB1-202ENST00000395354 DPH3Q96FX2 82 aa12.07□□□□□ -0.48
LMNB1-202ENST00000395354 SIGMAR1Q99720 223 aa12.07□□□□□ -0.48
LMNB1-202ENST00000395354 Q9BRP9 147 aa12.07□□□□□ -0.48
LMNB1-202ENST00000395354 LAMTOR3Q9UHA4 124 aa12.07□□□□□ -0.48
LMNB1-202ENST00000395354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.07□□□□□ -0.48
LMNB1-202ENST00000395354 PANO1I0J062 215 aa12.06□□□□□ -0.48
LMNB1-202ENST00000395354 PHF5AQ7RTV0 110 aaKnown RBP12.06□□□□□ -0.48
LMNB1-202ENST00000395354 UBE2BP63146 152 aa12.05□□□□□ -0.48
LMNB1-202ENST00000395354 RBM3P98179 157 aaKnown RBP12.05□□□□□ -0.48
LMNB1-202ENST00000395354 Q6ZSA8 131 aa12.05□□□□□ -0.48
LMNB1-202ENST00000395354 GAGE2AQ6NT46 116 aa12.04□□□□□ -0.48
LMNB1-202ENST00000395354 CCKP06307 115 aa12.03□□□□□ -0.48
LMNB1-202ENST00000395354 EPPK1P58107 5090 aaKnown RBP12.02□□□□□ -0.48
LMNB1-202ENST00000395354 LOC110117498A0A087WWA1 95 aa12.02□□□□□ -0.49
LMNB1-202ENST00000395354 PDE6GP18545 87 aa12.02□□□□□ -0.49
LMNB1-202ENST00000395354 NDUFV3P56181 108 aaKnown RBP12.02□□□□□ -0.49
LMNB1-202ENST00000395354 H0Y9J4 135 aa12.01□□□□□ -0.49
LMNB1-202ENST00000395354 C21orf62-AS1Q17RA5 79 aa12.01□□□□□ -0.49
LMNB1-202ENST00000395354 FAM19A1Q7Z5A9 133 aa12.01□□□□□ -0.49
LMNB1-202ENST00000395354 DYNC1H1Q14204 4646 aaKnown RBP12□□□□□ -0.49
LMNB1-202ENST00000395354 IGLV5-48A0A075B6I7 105 aa12□□□□□ -0.49
LMNB1-202ENST00000395354 XGP55808 180 aa12□□□□□ -0.49
LMNB1-202ENST00000395354 A0A1B0GV72 72 aa11.99□□□□□ -0.49
LMNB1-202ENST00000395354 LINC01547P58512 204 aaPredicted RBP11.99□□□□□ -0.49
LMNB1-202ENST00000395354 Q8N377 158 aa11.99□□□□□ -0.49
LMNB1-202ENST00000395354 SMCR5Q8TEV8 140 aa11.99□□□□□ -0.49
LMNB1-202ENST00000395354 DSCR8Q96T75 97 aa11.99□□□□□ -0.49
LMNB1-202ENST00000395354 LRP1BQ9NZR2 4599 aa11.99□□□□□ -0.49
LMNB1-202ENST00000395354 KRTAP11-1Q8IUC1 163 aa11.98□□□□□ -0.49
LMNB1-202ENST00000395354 PLAC8Q9NZF1 115 aa11.98□□□□□ -0.49
LMNB1-202ENST00000395354 HAMPP81172 84 aa11.97□□□□□ -0.49
LMNB1-202ENST00000395354 Q6ZQT0 140 aa11.97□□□□□ -0.49
LMNB1-202ENST00000395354 SCXQ7RTU7 201 aa11.97□□□□□ -0.49
LMNB1-202ENST00000395354 CIRBP-AS1Q8TBR5 109 aa11.97□□□□□ -0.49
LMNB1-202ENST00000395354 ERC2-IT1O76042 136 aa11.96□□□□□ -0.5
LMNB1-202ENST00000395354 TRBV7-4A0A0J9YYF1 115 aa11.95□□□□□ -0.5
LMNB1-202ENST00000395354 DEFB105AQ8NG35 78 aa11.95□□□□□ -0.5
LMNB1-202ENST00000395354 BCE1O60756 84 aa11.94□□□□□ -0.5
LMNB1-202ENST00000395354 MT-ATP8P03928 68 aa11.94□□□□□ -0.5
LMNB1-202ENST00000395354 PRLHP81277 87 aa11.94□□□□□ -0.5
LMNB1-202ENST00000395354 DNAH8Q96JB1 4490 aa11.93□□□□□ -0.5
LMNB1-202ENST00000395354 ST20-AS1Q8NBB2 130 aa11.93□□□□□ -0.5
LMNB1-202ENST00000395354 CDK2AP2O75956 126 aa11.92□□□□□ -0.5
LMNB1-202ENST00000395354 LINC00643Q86TS7 51 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms