RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 HUWE1Q7Z6Z7 4374 aaKnown RBP12.1□□□□□ -0.47
PCDHA1-202ENST00000394633 LINC00528Q8N1L1 170 aa12.1□□□□□ -0.47
PCDHA1-202ENST00000394633 H3BNG1 76 aa12.09□□□□□ -0.47
PCDHA1-202ENST00000394633 COL7A1Q02388 2944 aa12.08□□□□□ -0.47
PCDHA1-202ENST00000394633 K7EIL1 84 aa12.08□□□□□ -0.48
PCDHA1-202ENST00000394633 SCXQ7RTU7 201 aa12.08□□□□□ -0.48
PCDHA1-202ENST00000394633 Q6ZTC4 211 aa12.06□□□□□ -0.48
PCDHA1-202ENST00000394633 Q6ZRP5 223 aa12.05□□□□□ -0.48
PCDHA1-202ENST00000394633 ESRGQ1W209 222 aa12.05□□□□□ -0.48
PCDHA1-202ENST00000394633 H7BZZ5 65 aa12.03□□□□□ -0.48
PCDHA1-202ENST00000394633 C1orf43Q9BWL3 253 aa12.02□□□□□ -0.48
PCDHA1-202ENST00000394633 DNAH9Q9NYC9 4486 aa12.02□□□□□ -0.49
PCDHA1-202ENST00000394633 FAM236DA0A1B0GTK5 79 aa12.01□□□□□ -0.49
PCDHA1-202ENST00000394633 FAM236CP0DP71 79 aa12.01□□□□□ -0.49
PCDHA1-202ENST00000394633 KLKP1Q107X0 134 aa12.01□□□□□ -0.49
PCDHA1-202ENST00000394633 MRAPQ8TCY5 172 aa12.01□□□□□ -0.49
PCDHA1-202ENST00000394633 PRKDCP78527 4128 aaKnown RBP12.01□□□□□ -0.49
PCDHA1-202ENST00000394633 STAB2Q8WWQ8 2551 aa11.99□□□□□ -0.49
PCDHA1-202ENST00000394633 IGKV2D-24A0A075B6R9 120 aa11.99□□□□□ -0.49
PCDHA1-202ENST00000394633 SNURFQ9Y675 71 aa11.99□□□□□ -0.49
PCDHA1-202ENST00000394633 RMI2Q96E14 147 aa11.98□□□□□ -0.49
PCDHA1-202ENST00000394633 TM2D3Q9BRN9 247 aa11.98□□□□□ -0.49
PCDHA1-202ENST00000394633 SYCNQ0VAF6 134 aa11.98□□□□□ -0.49
PCDHA1-202ENST00000394633 MEGF8Q7Z7M0 2845 aa11.97□□□□□ -0.49
PCDHA1-202ENST00000394633 C5orf47Q569G3 176 aa11.97□□□□□ -0.49
PCDHA1-202ENST00000394633 LINC01556Q5JQF7 62 aa11.97□□□□□ -0.49
PCDHA1-202ENST00000394633 F8WDY8 70 aa11.96□□□□□ -0.49
PCDHA1-202ENST00000394633 SERTAD4-AS1Q5TG53 156 aa11.96□□□□□ -0.49
PCDHA1-202ENST00000394633 Q5XG85 94 aa11.96□□□□□ -0.49
PCDHA1-202ENST00000394633 KCNQ1DNQ9H478 68 aa11.95□□□□□ -0.5
PCDHA1-202ENST00000394633 C7orf33Q8WU49 177 aa11.94□□□□□ -0.5
PCDHA1-202ENST00000394633 Q8N9L7 120 aa11.94□□□□□ -0.5
PCDHA1-202ENST00000394633 NKAPP1Q8N9T2 125 aa11.94□□□□□ -0.5
PCDHA1-202ENST00000394633 C4orf26Q17RF5 130 aa11.92□□□□□ -0.5
PCDHA1-202ENST00000394633 Q8N377 158 aa11.92□□□□□ -0.5
PCDHA1-202ENST00000394633 DEFB105AQ8NG35 78 aa11.92□□□□□ -0.5
PCDHA1-202ENST00000394633 EPM2AB3EWF7 344 aa11.92□□□□□ -0.5
PCDHA1-202ENST00000394633 IGKV4-1P06312 121 aa11.92□□□□□ -0.5
PCDHA1-202ENST00000394633 DEFB131BA0A096LNP1 70 aa11.91□□□□□ -0.5
PCDHA1-202ENST00000394633 F8WEM9 126 aa11.91□□□□□ -0.5
PCDHA1-202ENST00000394633 NREPQ16612 68 aa11.91□□□□□ -0.5
PCDHA1-202ENST00000394633 BPY2O14599 106 aa11.91□□□□□ -0.5
PCDHA1-202ENST00000394633 SERP1Q9Y6X1 66 aa11.9□□□□□ -0.5
PCDHA1-202ENST00000394633 C3orf84H3BNL1 204 aa11.9□□□□□ -0.51
PCDHA1-202ENST00000394633 IGLV5-48A0A075B6I7 105 aa11.87□□□□□ -0.51
PCDHA1-202ENST00000394633 TLX1NBP0CAT3 122 aa11.87□□□□□ -0.51
PCDHA1-202ENST00000394633 DNAH10OSP0CZ25 163 aa11.86□□□□□ -0.51
PCDHA1-202ENST00000394633 C11orf45Q8TAV5 145 aa11.86□□□□□ -0.51
PCDHA1-202ENST00000394633 PLA2G2DQ9UNK4 145 aa11.86□□□□□ -0.51
PCDHA1-202ENST00000394633 RPL37AP8A6NKH3 93 aa11.85□□□□□ -0.51
PCDHA1-202ENST00000394633 HRCT1Q6UXD1 115 aa11.85□□□□□ -0.51
PCDHA1-202ENST00000394633 Q9BRP9 147 aa11.85□□□□□ -0.51
PCDHA1-202ENST00000394633 FAM168BA1KXE4 195 aa11.84□□□□□ -0.51
PCDHA1-202ENST00000394633 KRTAP4-16G5E9R7 235 aaPredicted RBP11.84□□□□□ -0.51
PCDHA1-202ENST00000394633 Q6ZRX8 168 aa11.84□□□□□ -0.51
PCDHA1-202ENST00000394633 NDUFC1O43677 76 aa11.84□□□□□ -0.51
PCDHA1-202ENST00000394633 TMEM254Q8TBM7 123 aa11.83□□□□□ -0.52
PCDHA1-202ENST00000394633 DHRS4-AS1Q9P1J3 65 aa11.83□□□□□ -0.52
PCDHA1-202ENST00000394633 ERC2-IT1O76042 136 aa11.83□□□□□ -0.52
PCDHA1-202ENST00000394633 LYSTQ99698 3801 aa11.82□□□□□ -0.52
PCDHA1-202ENST00000394633 IGLV1-50A0A075B6I6 118 aa11.82□□□□□ -0.52
PCDHA1-202ENST00000394633 CASC10Q5T4H9 136 aa11.82□□□□□ -0.52
PCDHA1-202ENST00000394633 OCR1Q9BZK8 76 aa11.82□□□□□ -0.52
PCDHA1-202ENST00000394633 IGLV5-37A0A075B6J1 123 aa11.81□□□□□ -0.52
PCDHA1-202ENST00000394633 A0A1W2PNM2 257 aa11.81□□□□□ -0.52
PCDHA1-202ENST00000394633 PRYO14603 147 aa11.81□□□□□ -0.52
PCDHA1-202ENST00000394633 KRTAP7-1Q8IUC3 87 aa11.81□□□□□ -0.52
PCDHA1-202ENST00000394633 CSMD3Q7Z407 3707 aa11.81□□□□□ -0.52
PCDHA1-202ENST00000394633 SPRR1AP35321 89 aa11.8□□□□□ -0.52
PCDHA1-202ENST00000394633 KRTAP21-3Q3LHN1 58 aa11.8□□□□□ -0.52
PCDHA1-202ENST00000394633 ST20-AS1Q8NBB2 130 aa11.8□□□□□ -0.52
PCDHA1-202ENST00000394633 TNP2Q05952 138 aa11.79□□□□□ -0.52
PCDHA1-202ENST00000394633 ETDCA0A1B0GVM5 59 aa11.79□□□□□ -0.52
PCDHA1-202ENST00000394633 FUSP35637 526 aaKnown RBP eCLIP11.78□□□□□ -0.52
PCDHA1-202ENST00000394633 B9D2Q9BPU9 175 aa11.78□□□□□ -0.52
PCDHA1-202ENST00000394633 DNAH1Q9P2D7 4330 aa11.77□□□□□ -0.52
PCDHA1-202ENST00000394633 LINC00588Q9Y4M8 146 aa11.77□□□□□ -0.53
PCDHA1-202ENST00000394633 C1orf137Q5JT78 98 aa11.76□□□□□ -0.53
PCDHA1-202ENST00000394633 A0A0U1RQV1 116 aa11.76□□□□□ -0.53
PCDHA1-202ENST00000394633 FBN3Q75N90 2809 aa11.75□□□□□ -0.53
PCDHA1-202ENST00000394633 A0A1B0GW54 56 aa11.75□□□□□ -0.53
PCDHA1-202ENST00000394633 ATP5EP56381 51 aaPredicted RBP11.75□□□□□ -0.53
PCDHA1-202ENST00000394633 Q8NBF4 154 aa11.74□□□□□ -0.53
PCDHA1-202ENST00000394633 TENM2Q9NT68 2774 aa11.73□□□□□ -0.53
PCDHA1-202ENST00000394633 FP248Q71RG6 208 aaPredicted RBP11.72□□□□□ -0.53
PCDHA1-202ENST00000394633 SMIM26A0A096LP01 95 aa11.72□□□□□ -0.53
PCDHA1-202ENST00000394633 MRPL55Q7Z7F7 128 aaKnown RBP11.72□□□□□ -0.53
PCDHA1-202ENST00000394633 SMIM29Q86T20 159 aa11.71□□□□□ -0.53
PCDHA1-202ENST00000394633 SPRR4Q96PI1 79 aa11.71□□□□□ -0.54
PCDHA1-202ENST00000394633 DNAH7Q8WXX0 4024 aa11.7□□□□□ -0.54
PCDHA1-202ENST00000394633 HIGD2AQ9BW72 106 aa11.69□□□□□ -0.54
PCDHA1-202ENST00000394633 UBE2BP63146 152 aa11.68□□□□□ -0.54
PCDHA1-202ENST00000394633 FAM30AQ9NZY2 134 aa11.68□□□□□ -0.54
PCDHA1-202ENST00000394633 TGP01266 2768 aa11.68□□□□□ -0.54
PCDHA1-202ENST00000394633 DYNC2H1Q8NCM8 4307 aaKnown RBP11.67□□□□□ -0.54
PCDHA1-202ENST00000394633 PLECQ15149 4684 aaKnown RBP11.66□□□□□ -0.54
PCDHA1-202ENST00000394633 DSCR10P59022 87 aa11.66□□□□□ -0.54
PCDHA1-202ENST00000394633 LINC00474Q9P2X8 69 aa11.66□□□□□ -0.54
PCDHA1-202ENST00000394633 STARD9Q9P2P6 4700 aa11.66□□□□□ -0.54
PCDHA1-202ENST00000394633 REG3GQ6UW15 175 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms