RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 FAM168BA1KXE4 195 aa9.72□□□□□ -0.85
MKS1-202ENST00000393119 PSCAO43653 123 aa9.71□□□□□ -0.85
MKS1-202ENST00000393119 NDUFC2O95298 119 aa9.71□□□□□ -0.85
MKS1-202ENST00000393119 FUSP35637 526 aaKnown RBP eCLIP9.71□□□□□ -0.85
MKS1-202ENST00000393119 NBDYA0A0U1RRE5 68 aa9.71□□□□□ -0.86
MKS1-202ENST00000393119 A0A087WVE0 104 aa9.7□□□□□ -0.86
MKS1-202ENST00000393119 IGKV3D-7A0A0C4DH55 119 aa9.7□□□□□ -0.86
MKS1-202ENST00000393119 SERTAD4-AS1Q5TG53 156 aa9.7□□□□□ -0.86
MKS1-202ENST00000393119 RMI2Q96E14 147 aa9.7□□□□□ -0.86
MKS1-202ENST00000393119 S100A7L2Q5SY68 101 aa9.7□□□□□ -0.86
MKS1-202ENST00000393119 TRBV10-3A0A0K0K1G6 114 aa9.69□□□□□ -0.86
MKS1-202ENST00000393119 VPREB1P12018 145 aa9.69□□□□□ -0.86
MKS1-202ENST00000393119 HYDINQ4G0P3 5121 aa9.69□□□□□ -0.86
MKS1-202ENST00000393119 LINC00167Q96N53 147 aa9.68□□□□□ -0.86
MKS1-202ENST00000393119 C6orf99Q4VX62 202 aa9.68□□□□□ -0.86
MKS1-202ENST00000393119 KRTAP7-1Q8IUC3 87 aa9.66□□□□□ -0.86
MKS1-202ENST00000393119 Q5XG85 94 aa9.66□□□□□ -0.86
MKS1-202ENST00000393119 CCKP06307 115 aa9.65□□□□□ -0.86
MKS1-202ENST00000393119 IGLV6-57P01721 117 aa9.65□□□□□ -0.87
MKS1-202ENST00000393119 Q6ZRN7 208 aaPredicted RBP9.65□□□□□ -0.87
MKS1-202ENST00000393119 MUC7Q8TAX7 377 aa9.65□□□□□ -0.87
MKS1-202ENST00000393119 DSCR8Q96T75 97 aa9.64□□□□□ -0.87
MKS1-202ENST00000393119 LRCOL1A6NCL2 159 aa9.63□□□□□ -0.87
MKS1-202ENST00000393119 ATP5EP2Q5VTU8 51 aa9.63□□□□□ -0.87
MKS1-202ENST00000393119 IGKV2-24A0A0C4DH68 120 aa9.62□□□□□ -0.87
MKS1-202ENST00000393119 RPL37AP8A6NKH3 93 aa9.61□□□□□ -0.87
MKS1-202ENST00000393119 HECTD4Q9Y4D8 3996 aa9.61□□□□□ -0.87
MKS1-202ENST00000393119 EPM2AB3EWF7 344 aa9.61□□□□□ -0.87
MKS1-202ENST00000393119 LY6G6CO95867 125 aa9.61□□□□□ -0.87
MKS1-202ENST00000393119 ORMDL1Q9P0S3 153 aa9.61□□□□□ -0.87
MKS1-202ENST00000393119 CHTF8P0CG12 524 aa9.6□□□□□ -0.87
MKS1-202ENST00000393119 TRAV23DV6A0A075B6W5 121 aa9.59□□□□□ -0.87
MKS1-202ENST00000393119 A0A096LNI7 61 aa9.59□□□□□ -0.87
MKS1-202ENST00000393119 TLX1NBP0CAT3 122 aa9.59□□□□□ -0.87
MKS1-202ENST00000393119 C7orf33Q8WU49 177 aa9.59□□□□□ -0.87
MKS1-202ENST00000393119 F8WDY8 70 aa9.58□□□□□ -0.88
MKS1-202ENST00000393119 M0R378 163 aa9.58□□□□□ -0.88
MKS1-202ENST00000393119 C4orf26Q17RF5 130 aa9.58□□□□□ -0.88
MKS1-202ENST00000393119 JMJD7-PLA2G4BH0Y9G9 81 aa9.57□□□□□ -0.88
MKS1-202ENST00000393119 ZNF73O43830 326 aaPredicted RBP9.56□□□□□ -0.88
MKS1-202ENST00000393119 GHRHP01286 108 aa9.56□□□□□ -0.88
MKS1-202ENST00000393119 NKAPP1Q8N9T2 125 aa9.56□□□□□ -0.88
MKS1-202ENST00000393119 A0A1W2PNN7 141 aa9.56□□□□□ -0.88
MKS1-202ENST00000393119 Q8N814 137 aa9.56□□□□□ -0.88
MKS1-202ENST00000393119 PANO1I0J062 215 aa9.55□□□□□ -0.88
MKS1-202ENST00000393119 CNBPP62633 177 aaKnown RBP9.55□□□□□ -0.88
MKS1-202ENST00000393119 Q6ZR54 194 aa9.55□□□□□ -0.88
MKS1-202ENST00000393119 FAM19A1Q7Z5A9 133 aa9.55□□□□□ -0.88
MKS1-202ENST00000393119 DNAH17Q9UFH2 4485 aa9.54□□□□□ -0.88
MKS1-202ENST00000393119 BCE1O60756 84 aa9.54□□□□□ -0.88
MKS1-202ENST00000393119 LINC00575Q6W349 94 aa9.54□□□□□ -0.88
MKS1-202ENST00000393119 HRCT1Q6UXD1 115 aa9.53□□□□□ -0.88
MKS1-202ENST00000393119 WWC2-AS2Q96NR7 200 aa9.53□□□□□ -0.88
MKS1-202ENST00000393119 DIRC1Q969H9 104 aa9.53□□□□□ -0.88
MKS1-202ENST00000393119 DNAH6Q9C0G6 4158 aa9.53□□□□□ -0.88
MKS1-202ENST00000393119 TMEM256-PLSCR3K7ERE1 68 aa9.52□□□□□ -0.88
MKS1-202ENST00000393119 FRAS1Q86XX4 4008 aa9.51□□□□□ -0.89
MKS1-202ENST00000393119 A0A087WTM6 91 aa9.5□□□□□ -0.89
MKS1-202ENST00000393119 H7BZZ5 65 aa9.5□□□□□ -0.89
MKS1-202ENST00000393119 KRTAP11-1Q8IUC1 163 aa9.5□□□□□ -0.89
MKS1-202ENST00000393119 C16orf90A8MZG2 172 aa9.49□□□□□ -0.89
MKS1-202ENST00000393119 COX7BP24311 80 aa9.49□□□□□ -0.89
MKS1-202ENST00000393119 LINC00476Q8WZB0 136 aa9.49□□□□□ -0.89
MKS1-202ENST00000393119 Q6ZQY7 126 aa9.49□□□□□ -0.89
MKS1-202ENST00000393119 C9orf163Q8N9P6 203 aa9.49□□□□□ -0.89
MKS1-202ENST00000393119 DNAH11Q96DT5 4516 aa9.48□□□□□ -0.89
MKS1-202ENST00000393119 IGLV1-50A0A075B6I6 118 aa9.48□□□□□ -0.89
MKS1-202ENST00000393119 ELOF1P60002 83 aaKnown RBP9.48□□□□□ -0.89
MKS1-202ENST00000393119 MRPL55Q7Z7F7 128 aaKnown RBP9.48□□□□□ -0.89
MKS1-202ENST00000393119 FAM236DA0A1B0GTK5 79 aa9.48□□□□□ -0.89
MKS1-202ENST00000393119 FAM236CP0DP71 79 aa9.48□□□□□ -0.89
MKS1-202ENST00000393119 Q6ZQT0 140 aa9.48□□□□□ -0.89
MKS1-202ENST00000393119 C20orf197Q8N268 126 aa9.48□□□□□ -0.89
MKS1-202ENST00000393119 KCNQ1DNQ9H478 68 aa9.48□□□□□ -0.89
MKS1-202ENST00000393119 LOC110117498A0A087WWA1 95 aa9.47□□□□□ -0.89
MKS1-202ENST00000393119 KLKP1Q107X0 134 aa9.47□□□□□ -0.89
MKS1-202ENST00000393119 UBL5Q9BZL1 73 aa9.47□□□□□ -0.89
MKS1-202ENST00000393119 PLA2G2DQ9UNK4 145 aa9.47□□□□□ -0.89
MKS1-202ENST00000393119 SACSQ9NZJ4 4579 aa9.47□□□□□ -0.89
MKS1-202ENST00000393119 DNAH5Q8TE73 4624 aa9.47□□□□□ -0.89
MKS1-202ENST00000393119 SRRM2Q9UQ35 2752 aaKnown RBP9.47□□□□□ -0.89
MKS1-202ENST00000393119 ALMS1Q8TCU4 4167 aa9.46□□□□□ -0.89
MKS1-202ENST00000393119 TRAV7A0A075B6U4 112 aa9.46□□□□□ -0.89
MKS1-202ENST00000393119 C14orf177Q52M58 125 aa9.46□□□□□ -0.89
MKS1-202ENST00000393119 PHF5AQ7RTV0 110 aaKnown RBP9.46□□□□□ -0.89
MKS1-202ENST00000393119 SERP1Q9Y6X1 66 aa9.46□□□□□ -0.9
MKS1-202ENST00000393119 FAT2Q9NYQ8 4349 aa9.46□□□□□ -0.9
MKS1-202ENST00000393119 LINC00528Q8N1L1 170 aa9.45□□□□□ -0.9
MKS1-202ENST00000393119 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.45□□□□□ -0.9
MKS1-202ENST00000393119 IGLV5-37A0A075B6J1 123 aa9.45□□□□□ -0.9
MKS1-202ENST00000393119 TNP2Q05952 138 aa9.45□□□□□ -0.9
MKS1-202ENST00000393119 C1orf134Q5TEV5 83 aa9.45□□□□□ -0.9
MKS1-202ENST00000393119 DNAH8Q96JB1 4490 aa9.44□□□□□ -0.9
MKS1-202ENST00000393119 Q9BRP9 147 aa9.43□□□□□ -0.9
MKS1-202ENST00000393119 KRTAP4-16G5E9R7 235 aaPredicted RBP9.42□□□□□ -0.9
MKS1-202ENST00000393119 LINC01547P58512 204 aaPredicted RBP9.42□□□□□ -0.9
MKS1-202ENST00000393119 DEFB105AQ8NG35 78 aa9.41□□□□□ -0.9
MKS1-202ENST00000393119 RTL8CO15255 209 aa9.41□□□□□ -0.9
MKS1-202ENST00000393119 ERC2-IT1O76042 136 aa9.41□□□□□ -0.9
MKS1-202ENST00000393119 RBM3P98179 157 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms