RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 TRAV7A0A075B6U4 112 aa3.63□□□□□ -1.83
ERCC4-202ENST00000389138 H3BQ85 93 aa3.63□□□□□ -1.83
ERCC4-202ENST00000389138 PANO1I0J062 215 aa3.63□□□□□ -1.83
ERCC4-202ENST00000389138 IGKCP01834 107 aa3.63□□□□□ -1.83
ERCC4-202ENST00000389138 RNASE3P12724 160 aaKnown RBP3.63□□□□□ -1.83
ERCC4-202ENST00000389138 C5orf38Q86SI9 138 aa3.63□□□□□ -1.83
ERCC4-202ENST00000389138 ST20Q9HBF5 79 aa3.63□□□□□ -1.83
ERCC4-202ENST00000389138 KIAA1109Q2LD37 5005 aa3.63□□□□□ -1.83
ERCC4-202ENST00000389138 CCKP06307 115 aa3.62□□□□□ -1.83
ERCC4-202ENST00000389138 ESRGQ1W209 222 aa3.62□□□□□ -1.83
ERCC4-202ENST00000389138 SPANXA2-OT1Q8N9U9 137 aa3.62□□□□□ -1.83
ERCC4-202ENST00000389138 NXT2Q9NPJ8 142 aaKnown RBP3.62□□□□□ -1.83
ERCC4-202ENST00000389138 ABCA13Q86UQ4 5058 aa3.62□□□□□ -1.83
ERCC4-202ENST00000389138 STAB2Q8WWQ8 2551 aa3.62□□□□□ -1.83
ERCC4-202ENST00000389138 IGLV2-18A0A075B6J9 118 aa3.62□□□□□ -1.83
ERCC4-202ENST00000389138 A0A0J9YX75 114 aa3.62□□□□□ -1.83
ERCC4-202ENST00000389138 FCER1GP30273 86 aa3.62□□□□□ -1.83
ERCC4-202ENST00000389138 ETDBQ3ZM63 59 aa3.62□□□□□ -1.83
ERCC4-202ENST00000389138 ASB16-AS1Q495Z4 193 aa3.62□□□□□ -1.83
ERCC4-202ENST00000389138 LENEPQ9Y5L5 61 aa3.62□□□□□ -1.83
ERCC4-202ENST00000389138 SPCS1Q9Y6A9 102 aa3.62□□□□□ -1.83
ERCC4-202ENST00000389138 CRPP02741 224 aa3.61□□□□□ -1.83
ERCC4-202ENST00000389138 DEFB131AP59861 70 aa3.61□□□□□ -1.83
ERCC4-202ENST00000389138 DEFB121Q5J5C9 76 aa3.61□□□□□ -1.83
ERCC4-202ENST00000389138 SMIM2Q9BVW6 85 aa3.61□□□□□ -1.83
ERCC4-202ENST00000389138 IBA57-AS1B1ANH7 110 aa3.61□□□□□ -1.83
ERCC4-202ENST00000389138 COX8AP10176 69 aa3.61□□□□□ -1.83
ERCC4-202ENST00000389138 ZNF56Q15929 161 aa3.61□□□□□ -1.83
ERCC4-202ENST00000389138 MYOZ3Q8TDC0 251 aa3.61□□□□□ -1.83
ERCC4-202ENST00000389138 MRPL35Q9NZE8 188 aaKnown RBP3.61□□□□□ -1.83
ERCC4-202ENST00000389138 DNAH10Q8IVF4 4471 aa3.6□□□□□ -1.83
ERCC4-202ENST00000389138 TRBV10-2A0A0K0K1G8 114 aa3.6□□□□□ -1.83
ERCC4-202ENST00000389138 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
ERCC4-202ENST00000389138 K7EMI3 77 aa3.6□□□□□ -1.83
ERCC4-202ENST00000389138 RHOHQ15669 191 aa3.6□□□□□ -1.83
ERCC4-202ENST00000389138 BVES-AS1Q5T3Y7 98 aa3.6□□□□□ -1.83
ERCC4-202ENST00000389138 DYNLRB2Q8TF09 96 aa3.6□□□□□ -1.83
ERCC4-202ENST00000389138 hDV103S1A0JD37 113 aa3.59□□□□□ -1.83
ERCC4-202ENST00000389138 C11orf86A6NJI1 115 aa3.59□□□□□ -1.83
ERCC4-202ENST00000389138 RPL39P62891 51 aaKnown RBP3.59□□□□□ -1.83
ERCC4-202ENST00000389138 LINC00269Q8N2A0 174 aa3.59□□□□□ -1.83
ERCC4-202ENST00000389138 LINC01546A6NGU7 62 aa3.59□□□□□ -1.84
ERCC4-202ENST00000389138 H3BRM9 83 aa3.59□□□□□ -1.84
ERCC4-202ENST00000389138 LINC00315P59091 139 aa3.59□□□□□ -1.84
ERCC4-202ENST00000389138 NDUFA12Q9UI09 145 aa3.59□□□□□ -1.84
ERCC4-202ENST00000389138 KIF25-AS1Q9Y6Z4 181 aa3.59□□□□□ -1.84
ERCC4-202ENST00000389138 A0A1W2PPM0 123 aa3.58□□□□□ -1.84
ERCC4-202ENST00000389138 H3BPC8 53 aa3.58□□□□□ -1.84
ERCC4-202ENST00000389138 RPL36AP83881 106 aaKnown RBP3.58□□□□□ -1.84
ERCC4-202ENST00000389138 WFDC2Q14508 124 aa3.58□□□□□ -1.84
ERCC4-202ENST00000389138 DEFB116Q30KQ4 102 aa3.58□□□□□ -1.84
ERCC4-202ENST00000389138 Q5W150 140 aa3.58□□□□□ -1.84
ERCC4-202ENST00000389138 SH2D6Q7Z4S9 175 aa3.58□□□□□ -1.84
ERCC4-202ENST00000389138 C15orf53Q8NAA6 179 aa3.58□□□□□ -1.84
ERCC4-202ENST00000389138 C4orf3Q8WVX3 66 aa3.58□□□□□ -1.84
ERCC4-202ENST00000389138 SDHAF1A6NFY7 115 aa3.58□□□□□ -1.84
ERCC4-202ENST00000389138 H7C2G1 150 aa3.58□□□□□ -1.84
ERCC4-202ENST00000389138 ATP5EP56381 51 aaPredicted RBP3.58□□□□□ -1.84
ERCC4-202ENST00000389138 Q6ZR54 194 aa3.58□□□□□ -1.84
ERCC4-202ENST00000389138 C20orf166-AS1Q96NR2 134 aa3.58□□□□□ -1.84
ERCC4-202ENST00000389138 ATOX1O00244 68 aa3.57□□□□□ -1.84
ERCC4-202ENST00000389138 P0C880 135 aa3.57□□□□□ -1.84
ERCC4-202ENST00000389138 FXYD2P54710 66 aa3.57□□□□□ -1.84
ERCC4-202ENST00000389138 SEC11AP67812 179 aa3.57□□□□□ -1.84
ERCC4-202ENST00000389138 DEFB114Q30KQ6 69 aa3.57□□□□□ -1.84
ERCC4-202ENST00000389138 LINC00467Q9BRT7 94 aa3.57□□□□□ -1.84
ERCC4-202ENST00000389138 WFDC10AQ9H1F0 79 aa3.57□□□□□ -1.84
ERCC4-202ENST00000389138 PPDPFLQ8WWR9 84 aa3.56□□□□□ -1.84
ERCC4-202ENST00000389138 C16orf90A8MZG2 172 aa3.56□□□□□ -1.84
ERCC4-202ENST00000389138 F8VRH5 84 aa3.56□□□□□ -1.84
ERCC4-202ENST00000389138 M0QY20 66 aa3.56□□□□□ -1.84
ERCC4-202ENST00000389138 Q1T7F1 81 aa3.56□□□□□ -1.84
ERCC4-202ENST00000389138 ODF3Q96PU9 254 aa3.56□□□□□ -1.84
ERCC4-202ENST00000389138 TRBV25-1A0A075B6N4 114 aa3.55□□□□□ -1.84
ERCC4-202ENST00000389138 IGHV3-64A0A075B6Q5 118 aa3.55□□□□□ -1.84
ERCC4-202ENST00000389138 PLNP26678 52 aa3.55□□□□□ -1.84
ERCC4-202ENST00000389138 POLR2KP53803 58 aaKnown RBP3.55□□□□□ -1.84
ERCC4-202ENST00000389138 WFDC9Q8NEX5 89 aa3.55□□□□□ -1.84
ERCC4-202ENST00000389138 NHP2Q9NX24 153 aaKnown RBP3.55□□□□□ -1.84
ERCC4-202ENST00000389138 IGKV2D-30A0A075B6S6 120 aa3.55□□□□□ -1.84
ERCC4-202ENST00000389138 H3BUT2 72 aa3.55□□□□□ -1.84
ERCC4-202ENST00000389138 ZNF861PO60384 105 aa3.55□□□□□ -1.84
ERCC4-202ENST00000389138 IGHV3-53P01767 116 aa3.55□□□□□ -1.84
ERCC4-202ENST00000389138 Q8NAQ8 132 aa3.55□□□□□ -1.84
ERCC4-202ENST00000389138 PRO0461Q9UI25 63 aa3.55□□□□□ -1.84
ERCC4-202ENST00000389138 HERC1Q15751 4861 aa3.54□□□□□ -1.84
ERCC4-202ENST00000389138 PPP1R17O96001 155 aa3.54□□□□□ -1.84
ERCC4-202ENST00000389138 TMEM170BQ5T4T1 132 aa3.54□□□□□ -1.84
ERCC4-202ENST00000389138 KMT2AQ03164 3969 aa3.54□□□□□ -1.84
ERCC4-202ENST00000389138 IGLV4-69A0A075B6H9 119 aa3.53□□□□□ -1.84
ERCC4-202ENST00000389138 TRGV1A0A0A0MS02 117 aa3.53□□□□□ -1.84
ERCC4-202ENST00000389138 TRAV12-1A0A0B4J245 112 aa3.53□□□□□ -1.84
ERCC4-202ENST00000389138 IGIPA6NJ69 53 aa3.53□□□□□ -1.84
ERCC4-202ENST00000389138 LYPD5Q6UWN5 251 aa3.53□□□□□ -1.84
ERCC4-202ENST00000389138 NDUFA11Q86Y39 141 aa3.53□□□□□ -1.84
ERCC4-202ENST00000389138 HIGD1BQ9P298 99 aa3.53□□□□□ -1.84
ERCC4-202ENST00000389138 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.53□□□□□ -1.84
ERCC4-202ENST00000389138 IGKV2-29A2NJV5 120 aaPredicted RBP3.53□□□□□ -1.84
ERCC4-202ENST00000389138 ZNF815PA8K554 130 aa3.53□□□□□ -1.84
ERCC4-202ENST00000389138 I3L3M4 83 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms