RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 DNAH10Q8IVF4 4471 aa12.37□□□□□ -0.43
GMDS-201ENST00000380805 PSCAO43653 123 aa12.37□□□□□ -0.43
GMDS-201ENST00000380805 GHRHP01286 108 aa12.37□□□□□ -0.43
GMDS-201ENST00000380805 GAGE2BQ13066 116 aa12.36□□□□□ -0.43
GMDS-201ENST00000380805 SMCR5Q8TEV8 140 aa12.36□□□□□ -0.43
GMDS-201ENST00000380805 IGLV1-50A0A075B6I6 118 aa12.35□□□□□ -0.43
GMDS-201ENST00000380805 FAM168BA1KXE4 195 aa12.35□□□□□ -0.43
GMDS-201ENST00000380805 SPRR1AP35321 89 aa12.35□□□□□ -0.43
GMDS-201ENST00000380805 PRYO14603 147 aa12.34□□□□□ -0.43
GMDS-201ENST00000380805 CCKP06307 115 aa12.34□□□□□ -0.43
GMDS-201ENST00000380805 LINC00643Q86TS7 51 aa12.34□□□□□ -0.43
GMDS-201ENST00000380805 VPS13DQ5THJ4 4388 aa12.34□□□□□ -0.43
GMDS-201ENST00000380805 TRBV7-7A0A0K0K1E9 115 aa12.33□□□□□ -0.44
GMDS-201ENST00000380805 KRTAP4-16G5E9R7 235 aaPredicted RBP12.33□□□□□ -0.44
GMDS-201ENST00000380805 C16orf90A8MZG2 172 aa12.32□□□□□ -0.44
GMDS-201ENST00000380805 Q6ZRN7 208 aaPredicted RBP12.32□□□□□ -0.44
GMDS-201ENST00000380805 LRCOL1A6NCL2 159 aa12.31□□□□□ -0.44
GMDS-201ENST00000380805 LOC110117498A0A087WWA1 95 aa12.31□□□□□ -0.44
GMDS-201ENST00000380805 MRPL55Q7Z7F7 128 aaKnown RBP12.31□□□□□ -0.44
GMDS-201ENST00000380805 C3orf84H3BNL1 204 aa12.3□□□□□ -0.44
GMDS-201ENST00000380805 RBM3P98179 157 aaKnown RBP12.29□□□□□ -0.44
GMDS-201ENST00000380805 IMUPQ9GZP8 106 aa12.28□□□□□ -0.44
GMDS-201ENST00000380805 A0A096LNI7 61 aa12.28□□□□□ -0.44
GMDS-201ENST00000380805 Q6ZRX8 168 aa12.28□□□□□ -0.44
GMDS-201ENST00000380805 FAM19A5Q7Z5A7 132 aaPredicted RBP12.27□□□□□ -0.45
GMDS-201ENST00000380805 LINC00846Q9NV44 126 aa12.27□□□□□ -0.45
GMDS-201ENST00000380805 LAMTOR3Q9UHA4 124 aa12.27□□□□□ -0.45
GMDS-201ENST00000380805 B5MCH6 92 aa12.26□□□□□ -0.45
GMDS-201ENST00000380805 Q6ZQT0 140 aa12.26□□□□□ -0.45
GMDS-201ENST00000380805 A0A1B0GV72 72 aa12.25□□□□□ -0.45
GMDS-201ENST00000380805 PDE6GP18545 87 aa12.25□□□□□ -0.45
GMDS-201ENST00000380805 DHRS4-AS1Q9P1J3 65 aa12.25□□□□□ -0.45
GMDS-201ENST00000380805 PKIGQ9Y2B9 76 aa12.25□□□□□ -0.45
GMDS-201ENST00000380805 RPL37AP8A6NKH3 93 aa12.25□□□□□ -0.45
GMDS-201ENST00000380805 C9orf163Q8N9P6 203 aa12.24□□□□□ -0.45
GMDS-201ENST00000380805 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.22□□□□□ -0.45
GMDS-201ENST00000380805 TRBV7-4A0A0J9YYF1 115 aa12.22□□□□□ -0.45
GMDS-201ENST00000380805 ETDCA0A1B0GVM5 59 aa12.21□□□□□ -0.45
GMDS-201ENST00000380805 NDUFV3P56181 108 aaKnown RBP12.21□□□□□ -0.45
GMDS-201ENST00000380805 DSCR8Q96T75 97 aa12.21□□□□□ -0.45
GMDS-201ENST00000380805 Q9BRP9 147 aa12.21□□□□□ -0.45
GMDS-201ENST00000380805 Q6JHZ5 121 aa12.2□□□□□ -0.46
GMDS-201ENST00000380805 A0A1W2PNN7 141 aa12.2□□□□□ -0.46
GMDS-201ENST00000380805 IGKV2-24A0A0C4DH68 120 aa12.18□□□□□ -0.46
GMDS-201ENST00000380805 LINC01547P58512 204 aaPredicted RBP12.18□□□□□ -0.46
GMDS-201ENST00000380805 REG3GQ6UW15 175 aa12.18□□□□□ -0.46
GMDS-201ENST00000380805 Q6ZR54 194 aa12.18□□□□□ -0.46
GMDS-201ENST00000380805 ALMS1Q8TCU4 4167 aa12.16□□□□□ -0.46
GMDS-201ENST00000380805 IGLV5-48A0A075B6I7 105 aa12.16□□□□□ -0.46
GMDS-201ENST00000380805 Q8N377 158 aa12.16□□□□□ -0.46
GMDS-201ENST00000380805 LINC00474Q9P2X8 69 aa12.14□□□□□ -0.47
GMDS-201ENST00000380805 KMT2AQ03164 3969 aa12.14□□□□□ -0.47
GMDS-201ENST00000380805 SACSQ9NZJ4 4579 aa12.13□□□□□ -0.47
GMDS-201ENST00000380805 ATP5EP2Q5VTU8 51 aa12.13□□□□□ -0.47
GMDS-201ENST00000380805 A0A087WTM6 91 aa12.11□□□□□ -0.47
GMDS-201ENST00000380805 M0R2N4 97 aa12.11□□□□□ -0.47
GMDS-201ENST00000380805 CHTF8P0CG12 524 aa12.11□□□□□ -0.47
GMDS-201ENST00000380805 UBL5Q9BZL1 73 aa12.1□□□□□ -0.47
GMDS-201ENST00000380805 EPM2AB3EWF7 344 aa12.09□□□□□ -0.47
GMDS-201ENST00000380805 LINC00476Q8WZB0 136 aa12.09□□□□□ -0.47
GMDS-201ENST00000380805 KMT2CQ8NEZ4 4911 aaKnown RBP12.09□□□□□ -0.47
GMDS-201ENST00000380805 LY6G6CO95867 125 aa12.08□□□□□ -0.47
GMDS-201ENST00000380805 TNP2Q05952 138 aa12.08□□□□□ -0.47
GMDS-201ENST00000380805 ANAPC13Q9BS18 74 aa12.08□□□□□ -0.47
GMDS-201ENST00000380805 ERC2-IT1O76042 136 aa12.08□□□□□ -0.48
GMDS-201ENST00000380805 UBE2BP63146 152 aa12.07□□□□□ -0.48
GMDS-201ENST00000380805 IGKV3D-7A0A0C4DH55 119 aa12.06□□□□□ -0.48
GMDS-201ENST00000380805 H0Y9J4 135 aa12.06□□□□□ -0.48
GMDS-201ENST00000380805 HIST1H4AP62805 103 aaKnown RBP12.06□□□□□ -0.48
GMDS-201ENST00000380805 ST20-AS1Q8NBB2 130 aa12.06□□□□□ -0.48
GMDS-201ENST00000380805 DEFB105AQ8NG35 78 aa12.06□□□□□ -0.48
GMDS-201ENST00000380805 HYDINQ4G0P3 5121 aa12.05□□□□□ -0.48
GMDS-201ENST00000380805 FAM236AA0A1B0GUQ0 79 aa12.05□□□□□ -0.48
GMDS-201ENST00000380805 FAM236BA0A1B0GV22 79 aa12.05□□□□□ -0.48
GMDS-201ENST00000380805 PHF5AQ7RTV0 110 aaKnown RBP12.05□□□□□ -0.48
GMDS-201ENST00000380805 DNAH6Q9C0G6 4158 aa12.04□□□□□ -0.48
GMDS-201ENST00000380805 DNAH17Q9UFH2 4485 aa12.04□□□□□ -0.48
GMDS-201ENST00000380805 SPACA4Q8TDM5 124 aa12.04□□□□□ -0.48
GMDS-201ENST00000380805 DNAH2Q9P225 4427 aa12.04□□□□□ -0.48
GMDS-201ENST00000380805 FAM19A1Q7Z5A9 133 aa12.03□□□□□ -0.48
GMDS-201ENST00000380805 KRTAP11-1Q8IUC1 163 aa12.03□□□□□ -0.48
GMDS-201ENST00000380805 PANO1I0J062 215 aa12.03□□□□□ -0.48
GMDS-201ENST00000380805 Q6ZVQ6 151 aa12.03□□□□□ -0.48
GMDS-201ENST00000380805 LCE6AA0A183 80 aa12.02□□□□□ -0.49
GMDS-201ENST00000380805 A0A1B0GW54 56 aa12□□□□□ -0.49
GMDS-201ENST00000380805 PRLHP81277 87 aa12□□□□□ -0.49
GMDS-201ENST00000380805 C1orf134Q5TEV5 83 aa11.99□□□□□ -0.49
GMDS-201ENST00000380805 SMIM29Q86T20 159 aa11.99□□□□□ -0.49
GMDS-201ENST00000380805 C3orf22Q8N5N4 141 aa11.99□□□□□ -0.49
GMDS-201ENST00000380805 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.99□□□□□ -0.49
GMDS-201ENST00000380805 RTL8CO15255 209 aa11.97□□□□□ -0.49
GMDS-201ENST00000380805 CXCL6P80162 114 aa11.97□□□□□ -0.49
GMDS-201ENST00000380805 SPRR1BP22528 89 aa11.94□□□□□ -0.5
GMDS-201ENST00000380805 C1orf137Q5JT78 98 aa11.94□□□□□ -0.5
GMDS-201ENST00000380805 KRTAP13-1Q8IUC0 172 aa11.94□□□□□ -0.5
GMDS-201ENST00000380805 RYR2Q92736 4967 aa11.93□□□□□ -0.5
GMDS-201ENST00000380805 BCE1O60756 84 aa11.93□□□□□ -0.5
GMDS-201ENST00000380805 HIGD2AQ9BW72 106 aa11.93□□□□□ -0.5
GMDS-201ENST00000380805 IGLV8-61A0A075B6I0 122 aa11.92□□□□□ -0.5
GMDS-201ENST00000380805 A0A087WVE0 104 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms