RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 TENM2Q9NT68 2774 aa12.74□□□□□ -0.37
SSU72-204ENST00000378726 S100A7L2Q5SY68 101 aa12.73□□□□□ -0.37
SSU72-204ENST00000378726 LINC00575Q6W349 94 aa12.72□□□□□ -0.37
SSU72-204ENST00000378726 NDUFC2-KCTD14E9PQ53 114 aa12.71□□□□□ -0.37
SSU72-204ENST00000378726 DNAH7Q8WXX0 4024 aa12.7□□□□□ -0.38
SSU72-204ENST00000378726 ATP5EP2Q5VTU8 51 aa12.69□□□□□ -0.38
SSU72-204ENST00000378726 Q6ZRP5 223 aa12.68□□□□□ -0.38
SSU72-204ENST00000378726 FAM19A1Q7Z5A9 133 aa12.66□□□□□ -0.38
SSU72-204ENST00000378726 STARD9Q9P2P6 4700 aa12.66□□□□□ -0.38
SSU72-204ENST00000378726 DSCR8Q96T75 97 aa12.65□□□□□ -0.38
SSU72-204ENST00000378726 PSCAO43653 123 aa12.64□□□□□ -0.39
SSU72-204ENST00000378726 IGLV6-57P01721 117 aa12.64□□□□□ -0.39
SSU72-204ENST00000378726 Q6ZQT0 140 aa12.64□□□□□ -0.39
SSU72-204ENST00000378726 DNAH10Q8IVF4 4471 aa12.63□□□□□ -0.39
SSU72-204ENST00000378726 RBM3P98179 157 aaKnown RBP12.63□□□□□ -0.39
SSU72-204ENST00000378726 TRAV23DV6A0A075B6W5 121 aa12.62□□□□□ -0.39
SSU72-204ENST00000378726 M0R2N4 97 aa12.62□□□□□ -0.39
SSU72-204ENST00000378726 UBL5Q9BZL1 73 aa12.62□□□□□ -0.39
SSU72-204ENST00000378726 GHRHP01286 108 aa12.62□□□□□ -0.39
SSU72-204ENST00000378726 LAMTOR3Q9UHA4 124 aa12.62□□□□□ -0.39
SSU72-204ENST00000378726 NBDYA0A0U1RRE5 68 aa12.61□□□□□ -0.39
SSU72-204ENST00000378726 OXTP01178 125 aa12.61□□□□□ -0.39
SSU72-204ENST00000378726 TLX1NBP0CAT3 122 aa12.61□□□□□ -0.39
SSU72-204ENST00000378726 VPREB1P12018 145 aa12.61□□□□□ -0.39
SSU72-204ENST00000378726 TRBV10-3A0A0K0K1G6 114 aa12.6□□□□□ -0.39
SSU72-204ENST00000378726 LOC110117498A0A087WWA1 95 aa12.59□□□□□ -0.39
SSU72-204ENST00000378726 Q6ZQY7 126 aa12.58□□□□□ -0.39
SSU72-204ENST00000378726 FBN3Q75N90 2809 aa12.57□□□□□ -0.4
SSU72-204ENST00000378726 M0R378 163 aa12.56□□□□□ -0.4
SSU72-204ENST00000378726 VPS13DQ5THJ4 4388 aa12.55□□□□□ -0.4
SSU72-204ENST00000378726 Q5XG85 94 aa12.53□□□□□ -0.4
SSU72-204ENST00000378726 C4orf26Q17RF5 130 aa12.53□□□□□ -0.4
SSU72-204ENST00000378726 DIRC1Q969H9 104 aa12.53□□□□□ -0.4
SSU72-204ENST00000378726 LINC01547P58512 204 aaPredicted RBP12.52□□□□□ -0.41
SSU72-204ENST00000378726 Q6ZVQ6 151 aa12.52□□□□□ -0.41
SSU72-204ENST00000378726 BCE1O60756 84 aa12.51□□□□□ -0.41
SSU72-204ENST00000378726 SERTAD4-AS1Q5TG53 156 aa12.51□□□□□ -0.41
SSU72-204ENST00000378726 C20orf197Q8N268 126 aa12.51□□□□□ -0.41
SSU72-204ENST00000378726 C14orf177Q52M58 125 aa12.5□□□□□ -0.41
SSU72-204ENST00000378726 ZNF73O43830 326 aaPredicted RBP12.5□□□□□ -0.41
SSU72-204ENST00000378726 CNBPP62633 177 aaKnown RBP12.5□□□□□ -0.41
SSU72-204ENST00000378726 HAMPP81172 84 aa12.5□□□□□ -0.41
SSU72-204ENST00000378726 NKAPP1Q8N9T2 125 aa12.5□□□□□ -0.41
SSU72-204ENST00000378726 PLA2G2DQ9UNK4 145 aa12.49□□□□□ -0.41
SSU72-204ENST00000378726 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.48□□□□□ -0.41
SSU72-204ENST00000378726 COX7BP24311 80 aa12.48□□□□□ -0.41
SSU72-204ENST00000378726 Q6ZRN7 208 aaPredicted RBP12.48□□□□□ -0.41
SSU72-204ENST00000378726 LRCOL1A6NCL2 159 aa12.47□□□□□ -0.41
SSU72-204ENST00000378726 FAM236DA0A1B0GTK5 79 aa12.47□□□□□ -0.41
SSU72-204ENST00000378726 FAM168BA1KXE4 195 aa12.47□□□□□ -0.41
SSU72-204ENST00000378726 FAM236CP0DP71 79 aa12.47□□□□□ -0.41
SSU72-204ENST00000378726 HRCT1Q6UXD1 115 aa12.47□□□□□ -0.41
SSU72-204ENST00000378726 TRAV7A0A075B6U4 112 aa12.46□□□□□ -0.41
SSU72-204ENST00000378726 H3BQ85 93 aa12.46□□□□□ -0.41
SSU72-204ENST00000378726 TGP01266 2768 aa12.46□□□□□ -0.42
SSU72-204ENST00000378726 ELOF1P60002 83 aaKnown RBP12.46□□□□□ -0.42
SSU72-204ENST00000378726 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.46□□□□□ -0.42
SSU72-204ENST00000378726 PDE6GP18545 87 aa12.45□□□□□ -0.42
SSU72-204ENST00000378726 C7orf33Q8WU49 177 aa12.45□□□□□ -0.42
SSU72-204ENST00000378726 TRBV7-4A0A0J9YYF1 115 aa12.43□□□□□ -0.42
SSU72-204ENST00000378726 KRTAP7-1Q8IUC3 87 aa12.43□□□□□ -0.42
SSU72-204ENST00000378726 IGLV5-37A0A075B6J1 123 aa12.42□□□□□ -0.42
SSU72-204ENST00000378726 H7BZZ5 65 aa12.42□□□□□ -0.42
SSU72-204ENST00000378726 SERP1Q9Y6X1 66 aa12.42□□□□□ -0.42
SSU72-204ENST00000378726 WWC2-AS2Q96NR7 200 aa12.41□□□□□ -0.42
SSU72-204ENST00000378726 TRBV7-6A0A0J9YX20 115 aa12.41□□□□□ -0.42
SSU72-204ENST00000378726 C16orf90A8MZG2 172 aa12.41□□□□□ -0.42
SSU72-204ENST00000378726 EPM2AB3EWF7 344 aa12.41□□□□□ -0.42
SSU72-204ENST00000378726 CXCL6P80162 114 aa12.41□□□□□ -0.42
SSU72-204ENST00000378726 KCNQ1DNQ9H478 68 aa12.41□□□□□ -0.42
SSU72-204ENST00000378726 KMT2AQ03164 3969 aa12.4□□□□□ -0.42
SSU72-204ENST00000378726 A0A096LNI7 61 aa12.4□□□□□ -0.42
SSU72-204ENST00000378726 Q6ZR54 194 aa12.4□□□□□ -0.42
SSU72-204ENST00000378726 SCXQ7RTU7 201 aa12.4□□□□□ -0.42
SSU72-204ENST00000378726 IGKV2-24A0A0C4DH68 120 aa12.39□□□□□ -0.43
SSU72-204ENST00000378726 KLKP1Q107X0 134 aa12.39□□□□□ -0.43
SSU72-204ENST00000378726 RPL37AP8A6NKH3 93 aa12.39□□□□□ -0.43
SSU72-204ENST00000378726 C9orf163Q8N9P6 203 aa12.38□□□□□ -0.43
SSU72-204ENST00000378726 LY6G6CO95867 125 aa12.37□□□□□ -0.43
SSU72-204ENST00000378726 IGLV1-50A0A075B6I6 118 aa12.37□□□□□ -0.43
SSU72-204ENST00000378726 MRPL55Q7Z7F7 128 aaKnown RBP12.37□□□□□ -0.43
SSU72-204ENST00000378726 LINC00528Q8N1L1 170 aa12.37□□□□□ -0.43
SSU72-204ENST00000378726 DNAH2Q9P225 4427 aa12.34□□□□□ -0.43
SSU72-204ENST00000378726 A0A087WTM6 91 aa12.33□□□□□ -0.44
SSU72-204ENST00000378726 A0A1W2PNN7 141 aa12.33□□□□□ -0.44
SSU72-204ENST00000378726 PRYO14603 147 aa12.31□□□□□ -0.44
SSU72-204ENST00000378726 CHTF8P0CG12 524 aa12.31□□□□□ -0.44
SSU72-204ENST00000378726 SNURFQ9Y675 71 aa12.31□□□□□ -0.44
SSU72-204ENST00000378726 C1orf134Q5TEV5 83 aa12.3□□□□□ -0.44
SSU72-204ENST00000378726 LINC00476Q8WZB0 136 aa12.29□□□□□ -0.44
SSU72-204ENST00000378726 NDUFC1O43677 76 aa12.29□□□□□ -0.44
SSU72-204ENST00000378726 PKIGQ9Y2B9 76 aa12.28□□□□□ -0.44
SSU72-204ENST00000378726 F8WEM9 126 aa12.27□□□□□ -0.44
SSU72-204ENST00000378726 KRTAP4-16G5E9R7 235 aaPredicted RBP12.27□□□□□ -0.44
SSU72-204ENST00000378726 SPRR1AP35321 89 aa12.27□□□□□ -0.44
SSU72-204ENST00000378726 SMIM26A0A096LP01 95 aa12.26□□□□□ -0.45
SSU72-204ENST00000378726 ETDCA0A1B0GVM5 59 aa12.26□□□□□ -0.45
SSU72-204ENST00000378726 Q8N9L7 120 aa12.25□□□□□ -0.45
SSU72-204ENST00000378726 C3orf84H3BNL1 204 aa12.25□□□□□ -0.45
SSU72-204ENST00000378726 DEFB105AQ8NG35 78 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 311.4 ms