RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 PRYO14603 147 aa16.67■□□□□ 0.26
ATPAF1-202ENST00000371937 COX7BP24311 80 aa16.67■□□□□ 0.26
ATPAF1-202ENST00000371937 LINC00575Q6W349 94 aa16.67■□□□□ 0.26
ATPAF1-202ENST00000371937 LINC01600Q96MT4 127 aa16.66■□□□□ 0.26
ATPAF1-202ENST00000371937 FUSP35637 526 aaKnown RBP eCLIP16.66■□□□□ 0.26
ATPAF1-202ENST00000371937 ELOF1P60002 83 aaKnown RBP16.66■□□□□ 0.26
ATPAF1-202ENST00000371937 HYDINQ4G0P3 5121 aa16.65■□□□□ 0.26
ATPAF1-202ENST00000371937 DPH3Q96FX2 82 aa16.65■□□□□ 0.26
ATPAF1-202ENST00000371937 HECTD4Q9Y4D8 3996 aa16.64■□□□□ 0.25
ATPAF1-202ENST00000371937 SPACA4Q8TDM5 124 aa16.64■□□□□ 0.25
ATPAF1-202ENST00000371937 ETDBQ3ZM63 59 aa16.63■□□□□ 0.25
ATPAF1-202ENST00000371937 FRAS1Q86XX4 4008 aa16.62■□□□□ 0.25
ATPAF1-202ENST00000371937 hADV29S1A0JD25 119 aa16.61■□□□□ 0.25
ATPAF1-202ENST00000371937 PANO1I0J062 215 aa16.61■□□□□ 0.25
ATPAF1-202ENST00000371937 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.61■□□□□ 0.25
ATPAF1-202ENST00000371937 BAALC-AS2P0C853 105 aa16.6■□□□□ 0.25
ATPAF1-202ENST00000371937 SPRR1AP35321 89 aa16.59■□□□□ 0.25
ATPAF1-202ENST00000371937 TEN1Q86WV5 123 aa16.59■□□□□ 0.25
ATPAF1-202ENST00000371937 SACSQ9NZJ4 4579 aa16.58■□□□□ 0.24
ATPAF1-202ENST00000371937 LINC00528Q8N1L1 170 aa16.58■□□□□ 0.24
ATPAF1-202ENST00000371937 REG3GQ6UW15 175 aa16.56■□□□□ 0.24
ATPAF1-202ENST00000371937 ORMDL1Q9P0S3 153 aa16.56■□□□□ 0.24
ATPAF1-202ENST00000371937 ETDCA0A1B0GVM5 59 aa16.56■□□□□ 0.24
ATPAF1-202ENST00000371937 EPM2AB3EWF7 344 aa16.56■□□□□ 0.24
ATPAF1-202ENST00000371937 PHF5AQ7RTV0 110 aaKnown RBP16.56■□□□□ 0.24
ATPAF1-202ENST00000371937 KRTAP4-16G5E9R7 235 aaPredicted RBP16.55■□□□□ 0.24
ATPAF1-202ENST00000371937 KRTAP10-2P60368 255 aa16.55■□□□□ 0.24
ATPAF1-202ENST00000371937 UBE2BP63146 152 aa16.54■□□□□ 0.24
ATPAF1-202ENST00000371937 INAFM2P0DMQ5 153 aa16.52■□□□□ 0.24
ATPAF1-202ENST00000371937 B5MCH6 92 aa16.52■□□□□ 0.23
ATPAF1-202ENST00000371937 Q6ZRX8 168 aa16.52■□□□□ 0.23
ATPAF1-202ENST00000371937 OCIAD2Q56VL3 154 aa16.5■□□□□ 0.23
ATPAF1-202ENST00000371937 LINC00336Q6ZUF6 198 aa16.5■□□□□ 0.23
ATPAF1-202ENST00000371937 DHRS4-AS1Q9P1J3 65 aa16.49■□□□□ 0.23
ATPAF1-202ENST00000371937 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.48■□□□□ 0.23
ATPAF1-202ENST00000371937 PPDPFLQ8WWR9 84 aa16.48■□□□□ 0.23
ATPAF1-202ENST00000371937 PLAC8Q9NZF1 115 aa16.48■□□□□ 0.23
ATPAF1-202ENST00000371937 TMEM256-PLSCR3K7ERE1 68 aa16.47■□□□□ 0.23
ATPAF1-202ENST00000371937 Q6ZQY7 126 aa16.47■□□□□ 0.23
ATPAF1-202ENST00000371937 DNAH11Q96DT5 4516 aa16.47■□□□□ 0.23
ATPAF1-202ENST00000371937 FAT2Q9NYQ8 4349 aa16.47■□□□□ 0.23
ATPAF1-202ENST00000371937 H3BQ85 93 aa16.47■□□□□ 0.23
ATPAF1-202ENST00000371937 GHRHP01286 108 aa16.46■□□□□ 0.23
ATPAF1-202ENST00000371937 K7ERU9 68 aa16.45■□□□□ 0.22
ATPAF1-202ENST00000371937 TEX49A0A1B0GTD5 131 aa16.43■□□□□ 0.22
ATPAF1-202ENST00000371937 J3QR89 54 aa16.42■□□□□ 0.22
ATPAF1-202ENST00000371937 KRTAP11-1Q8IUC1 163 aa16.42■□□□□ 0.22
ATPAF1-202ENST00000371937 FAM19A1Q7Z5A9 133 aa16.41■□□□□ 0.22
ATPAF1-202ENST00000371937 Q9BRP9 147 aa16.41■□□□□ 0.22
ATPAF1-202ENST00000371937 PKD1P98161 4303 aa16.38■□□□□ 0.21
ATPAF1-202ENST00000371937 DNAH5Q8TE73 4624 aa16.37■□□□□ 0.21
ATPAF1-202ENST00000371937 H0Y9J4 135 aa16.35■□□□□ 0.21
ATPAF1-202ENST00000371937 KRTAP10-1P60331 282 aa16.35■□□□□ 0.21
ATPAF1-202ENST00000371937 Q6ZSA8 131 aa16.34■□□□□ 0.21
ATPAF1-202ENST00000371937 BCE1O60756 84 aa16.33■□□□□ 0.21
ATPAF1-202ENST00000371937 PRLHP81277 87 aa16.33■□□□□ 0.21
ATPAF1-202ENST00000371937 FAM30AQ9NZY2 134 aa16.33■□□□□ 0.21
ATPAF1-202ENST00000371937 SMCR5Q8TEV8 140 aa16.32■□□□□ 0.2
ATPAF1-202ENST00000371937 JMJD7-PLA2G4BH0Y9G9 81 aa16.31■□□□□ 0.2
ATPAF1-202ENST00000371937 OBSCN-AS1Q96MR7 158 aa16.31■□□□□ 0.2
ATPAF1-202ENST00000371937 RYR2Q92736 4967 aa16.31■□□□□ 0.2
ATPAF1-202ENST00000371937 UBE2AP49459 152 aa16.3■□□□□ 0.2
ATPAF1-202ENST00000371937 CIRBP-AS1Q8TBR5 109 aa16.29■□□□□ 0.2
ATPAF1-202ENST00000371937 LAMTOR3Q9UHA4 124 aa16.29■□□□□ 0.2
ATPAF1-202ENST00000371937 KMT2CQ8NEZ4 4911 aaKnown RBP16.28■□□□□ 0.2
ATPAF1-202ENST00000371937 ERC2-IT1O76042 136 aa16.28■□□□□ 0.2
ATPAF1-202ENST00000371937 HIGD2AQ9BW72 106 aa16.27■□□□□ 0.2
ATPAF1-202ENST00000371937 DEFB105AQ8NG35 78 aa16.26■□□□□ 0.19
ATPAF1-202ENST00000371937 PSORS1C2Q9UIG4 136 aa16.25■□□□□ 0.19
ATPAF1-202ENST00000371937 SCXQ7RTU7 201 aa16.24■□□□□ 0.19
ATPAF1-202ENST00000371937 DNAH8Q96JB1 4490 aa16.24■□□□□ 0.19
ATPAF1-202ENST00000371937 IGLV5-48A0A075B6I7 105 aa16.24■□□□□ 0.19
ATPAF1-202ENST00000371937 A0A1B0GVY2 172 aa16.23■□□□□ 0.19
ATPAF1-202ENST00000371937 LINC01547P58512 204 aaPredicted RBP16.23■□□□□ 0.19
ATPAF1-202ENST00000371937 Q8N377 158 aa16.23■□□□□ 0.19
ATPAF1-202ENST00000371937 ST20-AS1Q8NBB2 130 aa16.23■□□□□ 0.19
ATPAF1-202ENST00000371937 C14orf132Q9NPU4 83 aa16.22■□□□□ 0.19
ATPAF1-202ENST00000371937 NDUFV3P56181 108 aaKnown RBP16.22■□□□□ 0.19
ATPAF1-202ENST00000371937 KRTAP13-1Q8IUC0 172 aa16.22■□□□□ 0.19
ATPAF1-202ENST00000371937 A0A1B0GV72 72 aa16.21■□□□□ 0.19
ATPAF1-202ENST00000371937 RBM3P98179 157 aaKnown RBP16.21■□□□□ 0.19
ATPAF1-202ENST00000371937 C1orf137Q5JT78 98 aa16.19■□□□□ 0.18
ATPAF1-202ENST00000371937 DSCR8Q96T75 97 aa16.14■□□□□ 0.17
ATPAF1-202ENST00000371937 FAM240AA0A1B0GVK7 77 aa16.13■□□□□ 0.17
ATPAF1-202ENST00000371937 GAGE2AQ6NT46 116 aa16.11■□□□□ 0.17
ATPAF1-202ENST00000371937 ACYP1P07311 99 aa16.1■□□□□ 0.17
ATPAF1-202ENST00000371937 PDE6GP18545 87 aa16.1■□□□□ 0.17
ATPAF1-202ENST00000371937 LOC110117498A0A087WWA1 95 aa16.1■□□□□ 0.17
ATPAF1-202ENST00000371937 ZNF861PO60384 105 aa16.1■□□□□ 0.17
ATPAF1-202ENST00000371937 HAMPP81172 84 aa16.1■□□□□ 0.17
ATPAF1-202ENST00000371937 VPS25Q9BRG1 176 aa16.1■□□□□ 0.17
ATPAF1-202ENST00000371937 CCKP06307 115 aa16.08■□□□□ 0.17
ATPAF1-202ENST00000371937 C3orf22Q8N5N4 141 aa16.07■□□□□ 0.16
ATPAF1-202ENST00000371937 PKHD1P08F94 4074 aa16.07■□□□□ 0.16
ATPAF1-202ENST00000371937 IGLV7-43P04211 117 aa16.06■□□□□ 0.16
ATPAF1-202ENST00000371937 TRBV7-4A0A0J9YYF1 115 aa16.05■□□□□ 0.16
ATPAF1-202ENST00000371937 SPRR1BP22528 89 aa16.05■□□□□ 0.16
ATPAF1-202ENST00000371937 Q6ZQT0 140 aa16.05■□□□□ 0.16
ATPAF1-202ENST00000371937 SMIM29Q86T20 159 aa16.04■□□□□ 0.16
ATPAF1-202ENST00000371937 C21orf62-AS1Q17RA5 79 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms