RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 C7orf33Q8WU49 177 aa4.45□□□□□ -1.7
TRIM55-203ENST00000350034 H3BQ85 93 aa4.44□□□□□ -1.7
TRIM55-203ENST00000350034 TMEM256-PLSCR3K7ERE1 68 aa4.44□□□□□ -1.7
TRIM55-203ENST00000350034 SNCGO76070 127 aa4.44□□□□□ -1.7
TRIM55-203ENST00000350034 ACYP1P07311 99 aa4.44□□□□□ -1.7
TRIM55-203ENST00000350034 SPRR1AP35321 89 aa4.44□□□□□ -1.7
TRIM55-203ENST00000350034 XGP55808 180 aa4.44□□□□□ -1.7
TRIM55-203ENST00000350034 SDIM1Q6ZPB5 146 aa4.44□□□□□ -1.7
TRIM55-203ENST00000350034 LINC00528Q8N1L1 170 aa4.44□□□□□ -1.7
TRIM55-203ENST00000350034 KRTAP4-16G5E9R7 235 aaPredicted RBP4.43□□□□□ -1.7
TRIM55-203ENST00000350034 PSCAO43653 123 aa4.43□□□□□ -1.7
TRIM55-203ENST00000350034 GAGE2BQ13066 116 aa4.43□□□□□ -1.7
TRIM55-203ENST00000350034 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.43□□□□□ -1.7
TRIM55-203ENST00000350034 NKAPP1Q8N9T2 125 aa4.43□□□□□ -1.7
TRIM55-203ENST00000350034 STAB2Q8WWQ8 2551 aa4.43□□□□□ -1.7
TRIM55-203ENST00000350034 IGLV1-50A0A075B6I6 118 aa4.42□□□□□ -1.7
TRIM55-203ENST00000350034 FAM168BA1KXE4 195 aa4.42□□□□□ -1.7
TRIM55-203ENST00000350034 C16orf90A8MZG2 172 aa4.42□□□□□ -1.7
TRIM55-203ENST00000350034 JMJD7-PLA2G4BH0Y9G9 81 aa4.42□□□□□ -1.7
TRIM55-203ENST00000350034 PRYO14603 147 aa4.42□□□□□ -1.7
TRIM55-203ENST00000350034 MT-ATP8P03928 68 aa4.42□□□□□ -1.7
TRIM55-203ENST00000350034 SCGB1A1P11684 91 aa4.42□□□□□ -1.7
TRIM55-203ENST00000350034 Q6ZR54 194 aa4.42□□□□□ -1.7
TRIM55-203ENST00000350034 A0A096LNI7 61 aa4.41□□□□□ -1.7
TRIM55-203ENST00000350034 Q6ZQY7 126 aa4.41□□□□□ -1.7
TRIM55-203ENST00000350034 C9orf163Q8N9P6 203 aa4.41□□□□□ -1.7
TRIM55-203ENST00000350034 C14orf132Q9NPU4 83 aa4.41□□□□□ -1.7
TRIM55-203ENST00000350034 MRPL55Q7Z7F7 128 aaKnown RBP4.4□□□□□ -1.71
TRIM55-203ENST00000350034 LOC110117498A0A087WWA1 95 aa4.39□□□□□ -1.71
TRIM55-203ENST00000350034 A0A1W2PNN7 141 aa4.39□□□□□ -1.71
TRIM55-203ENST00000350034 B5MCH6 92 aa4.39□□□□□ -1.71
TRIM55-203ENST00000350034 GHRHP01286 108 aa4.39□□□□□ -1.71
TRIM55-203ENST00000350034 CCKP06307 115 aa4.39□□□□□ -1.71
TRIM55-203ENST00000350034 PCP4P48539 62 aa4.39□□□□□ -1.71
TRIM55-203ENST00000350034 FAM19A5Q7Z5A7 132 aaPredicted RBP4.39□□□□□ -1.71
TRIM55-203ENST00000350034 WWC2-AS2Q96NR7 200 aa4.39□□□□□ -1.71
TRIM55-203ENST00000350034 PKIGQ9Y2B9 76 aa4.39□□□□□ -1.71
TRIM55-203ENST00000350034 LYSTQ99698 3801 aa4.39□□□□□ -1.71
TRIM55-203ENST00000350034 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.38□□□□□ -1.71
TRIM55-203ENST00000350034 RPL37AP8A6NKH3 93 aa4.38□□□□□ -1.71
TRIM55-203ENST00000350034 EPM2AB3EWF7 344 aa4.38□□□□□ -1.71
TRIM55-203ENST00000350034 GAGE2AQ6NT46 116 aa4.38□□□□□ -1.71
TRIM55-203ENST00000350034 Q6Q795 121 aa4.38□□□□□ -1.71
TRIM55-203ENST00000350034 Q6ZRX8 168 aa4.38□□□□□ -1.71
TRIM55-203ENST00000350034 SMCR5Q8TEV8 140 aa4.38□□□□□ -1.71
TRIM55-203ENST00000350034 DHRS4-AS1Q9P1J3 65 aa4.38□□□□□ -1.71
TRIM55-203ENST00000350034 A0A087WTM6 91 aa4.37□□□□□ -1.71
TRIM55-203ENST00000350034 LCE6AA0A183 80 aa4.37□□□□□ -1.71
TRIM55-203ENST00000350034 LINC01547P58512 204 aaPredicted RBP4.37□□□□□ -1.71
TRIM55-203ENST00000350034 RBM3P98179 157 aaKnown RBP4.37□□□□□ -1.71
TRIM55-203ENST00000350034 LINC00643Q86TS7 51 aa4.37□□□□□ -1.71
TRIM55-203ENST00000350034 Q9BRP9 147 aa4.37□□□□□ -1.71
TRIM55-203ENST00000350034 IGKV2-24A0A0C4DH68 120 aa4.36□□□□□ -1.71
TRIM55-203ENST00000350034 TRBV7-4A0A0J9YYF1 115 aa4.36□□□□□ -1.71
TRIM55-203ENST00000350034 TRBV7-7A0A0K0K1E9 115 aa4.36□□□□□ -1.71
TRIM55-203ENST00000350034 J3QL48 77 aa4.36□□□□□ -1.71
TRIM55-203ENST00000350034 M0R2N4 97 aa4.36□□□□□ -1.71
TRIM55-203ENST00000350034 PDE6GP18545 87 aa4.36□□□□□ -1.71
TRIM55-203ENST00000350034 NDUFV3P56181 108 aaKnown RBP4.36□□□□□ -1.71
TRIM55-203ENST00000350034 REG3GQ6UW15 175 aa4.36□□□□□ -1.71
TRIM55-203ENST00000350034 Q6ZQT0 140 aa4.36□□□□□ -1.71
TRIM55-203ENST00000350034 LINC00846Q9NV44 126 aa4.36□□□□□ -1.71
TRIM55-203ENST00000350034 IGLV5-48A0A075B6I7 105 aa4.35□□□□□ -1.71
TRIM55-203ENST00000350034 ETDCA0A1B0GVM5 59 aa4.35□□□□□ -1.71
TRIM55-203ENST00000350034 CHTF8P0CG12 524 aa4.35□□□□□ -1.71
TRIM55-203ENST00000350034 Q8N377 158 aa4.35□□□□□ -1.71
TRIM55-203ENST00000350034 IMUPQ9GZP8 106 aa4.35□□□□□ -1.71
TRIM55-203ENST00000350034 LINC00474Q9P2X8 69 aa4.35□□□□□ -1.71
TRIM55-203ENST00000350034 LAMTOR3Q9UHA4 124 aa4.35□□□□□ -1.71
TRIM55-203ENST00000350034 A0A1B0GV72 72 aa4.34□□□□□ -1.71
TRIM55-203ENST00000350034 ERC2-IT1O76042 136 aa4.34□□□□□ -1.71
TRIM55-203ENST00000350034 C21orf62-AS1Q17RA5 79 aa4.34□□□□□ -1.71
TRIM55-203ENST00000350034 KRTAP11-1Q8IUC1 163 aa4.34□□□□□ -1.71
TRIM55-203ENST00000350034 FRAS1Q86XX4 4008 aa4.33□□□□□ -1.72
TRIM55-203ENST00000350034 PANO1I0J062 215 aa4.33□□□□□ -1.72
TRIM55-203ENST00000350034 TNP2Q05952 138 aa4.33□□□□□ -1.72
TRIM55-203ENST00000350034 C1orf134Q5TEV5 83 aa4.33□□□□□ -1.72
TRIM55-203ENST00000350034 Q6JHZ5 121 aa4.33□□□□□ -1.72
TRIM55-203ENST00000350034 PHF5AQ7RTV0 110 aaKnown RBP4.33□□□□□ -1.72
TRIM55-203ENST00000350034 SPACA4Q8TDM5 124 aa4.33□□□□□ -1.72
TRIM55-203ENST00000350034 LINC00476Q8WZB0 136 aa4.33□□□□□ -1.72
TRIM55-203ENST00000350034 DSCR8Q96T75 97 aa4.33□□□□□ -1.72
TRIM55-203ENST00000350034 KRTAP9-2Q9BYQ4 174 aa4.33□□□□□ -1.72
TRIM55-203ENST00000350034 H0Y9J4 135 aa4.32□□□□□ -1.72
TRIM55-203ENST00000350034 ST20-AS1Q8NBB2 130 aa4.32□□□□□ -1.72
TRIM55-203ENST00000350034 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.32□□□□□ -1.72
TRIM55-203ENST00000350034 VPS13DQ5THJ4 4388 aa4.31□□□□□ -1.72
TRIM55-203ENST00000350034 C3orf84H3BNL1 204 aa4.31□□□□□ -1.72
TRIM55-203ENST00000350034 RTL8CO15255 209 aa4.31□□□□□ -1.72
TRIM55-203ENST00000350034 UBE2BP63146 152 aa4.31□□□□□ -1.72
TRIM55-203ENST00000350034 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
TRIM55-203ENST00000350034 CSMD3Q7Z407 3707 aa4.31□□□□□ -1.72
TRIM55-203ENST00000350034 PLECQ15149 4684 aaKnown RBP4.31□□□□□ -1.72
TRIM55-203ENST00000350034 STARD9Q9P2P6 4700 aa4.3□□□□□ -1.72
TRIM55-203ENST00000350034 LY6G6CO95867 125 aa4.3□□□□□ -1.72
TRIM55-203ENST00000350034 FAM19A1Q7Z5A9 133 aa4.3□□□□□ -1.72
TRIM55-203ENST00000350034 SMIM29Q86T20 159 aa4.3□□□□□ -1.72
TRIM55-203ENST00000350034 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
TRIM55-203ENST00000350034 DEFB105AQ8NG35 78 aa4.3□□□□□ -1.72
TRIM55-203ENST00000350034 HECTD4Q9Y4D8 3996 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms