RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 Q6ZRU5 148 aa6.39□□□□□ -1.39
RPGR-201ENST00000318842 KMT2BQ9UMN6 2715 aaPredicted RBP6.39□□□□□ -1.39
RPGR-201ENST00000318842 DIRC1Q969H9 104 aa6.38□□□□□ -1.39
RPGR-201ENST00000318842 HIGD2AQ9BW72 106 aa6.38□□□□□ -1.39
RPGR-201ENST00000318842 FAM30AQ9NZY2 134 aa6.38□□□□□ -1.39
RPGR-201ENST00000318842 MGAM2Q2M2H8 2515 aa6.38□□□□□ -1.39
RPGR-201ENST00000318842 TRAV7A0A075B6U4 112 aa6.37□□□□□ -1.39
RPGR-201ENST00000318842 FAM168BA1KXE4 195 aa6.37□□□□□ -1.39
RPGR-201ENST00000318842 CAMK2N2Q96S95 79 aa6.37□□□□□ -1.39
RPGR-201ENST00000318842 COX7BP24311 80 aa6.37□□□□□ -1.39
RPGR-201ENST00000318842 NREPQ16612 68 aa6.37□□□□□ -1.39
RPGR-201ENST00000318842 LINC00612Q8N6U2 182 aa6.36□□□□□ -1.39
RPGR-201ENST00000318842 TRBV7-6A0A0J9YX20 115 aa6.36□□□□□ -1.39
RPGR-201ENST00000318842 ST20-AS1Q8NBB2 130 aa6.36□□□□□ -1.39
RPGR-201ENST00000318842 PMAIP1Q13794 54 aa6.35□□□□□ -1.39
RPGR-201ENST00000318842 ATP5EP2Q5VTU8 51 aa6.35□□□□□ -1.39
RPGR-201ENST00000318842 Q6ZRP5 223 aa6.35□□□□□ -1.39
RPGR-201ENST00000318842 DNAH10Q8IVF4 4471 aa6.35□□□□□ -1.39
RPGR-201ENST00000318842 LOC110117498A0A087WWA1 95 aa6.34□□□□□ -1.39
RPGR-201ENST00000318842 COX17Q14061 63 aa6.34□□□□□ -1.39
RPGR-201ENST00000318842 SERTAD4-AS1Q5TG53 156 aa6.34□□□□□ -1.39
RPGR-201ENST00000318842 MIFP14174 115 aa6.34□□□□□ -1.39
RPGR-201ENST00000318842 TRBV7-4A0A0J9YYF1 115 aa6.34□□□□□ -1.4
RPGR-201ENST00000318842 TMEM254Q8TBM7 123 aa6.34□□□□□ -1.4
RPGR-201ENST00000318842 VPREB1P12018 145 aa6.33□□□□□ -1.4
RPGR-201ENST00000318842 CASC10Q5T4H9 136 aa6.33□□□□□ -1.4
RPGR-201ENST00000318842 Q8NAQ8 132 aa6.33□□□□□ -1.4
RPGR-201ENST00000318842 IGKV2D-24A0A075B6R9 120 aa6.32□□□□□ -1.4
RPGR-201ENST00000318842 IGKV4-1P06312 121 aa6.32□□□□□ -1.4
RPGR-201ENST00000318842 SMIM29Q86T20 159 aa6.32□□□□□ -1.4
RPGR-201ENST00000318842 ELOF1P60002 83 aaKnown RBP6.31□□□□□ -1.4
RPGR-201ENST00000318842 KLKP1Q107X0 134 aa6.31□□□□□ -1.4
RPGR-201ENST00000318842 Q6ZTC4 211 aa6.31□□□□□ -1.4
RPGR-201ENST00000318842 OXLD1Q5BKU9 147 aa6.31□□□□□ -1.4
RPGR-201ENST00000318842 A0A0J9YWU9 116 aa6.3□□□□□ -1.4
RPGR-201ENST00000318842 IGHV4-30-4P0DP06 118 aa6.3□□□□□ -1.4
RPGR-201ENST00000318842 CD164Q04900 197 aa6.3□□□□□ -1.4
RPGR-201ENST00000318842 C15orf56Q8N910 161 aa6.3□□□□□ -1.4
RPGR-201ENST00000318842 INAFM1C9JVW0 142 aa6.3□□□□□ -1.4
RPGR-201ENST00000318842 LELP1Q5T871 98 aa6.29□□□□□ -1.4
RPGR-201ENST00000318842 ERC2-IT1O76042 136 aa6.29□□□□□ -1.4
RPGR-201ENST00000318842 A8MU10 97 aa6.28□□□□□ -1.4
RPGR-201ENST00000318842 LINC00528Q8N1L1 170 aa6.28□□□□□ -1.4
RPGR-201ENST00000318842 KPRPQ5T749 579 aaPredicted RBP6.28□□□□□ -1.4
RPGR-201ENST00000318842 PRR15Q8IV56 129 aa6.28□□□□□ -1.4
RPGR-201ENST00000318842 Q8N377 158 aa6.28□□□□□ -1.4
RPGR-201ENST00000318842 PRR34Q9NV39 138 aa6.28□□□□□ -1.4
RPGR-201ENST00000318842 LYRM9A8MSI8 78 aa6.28□□□□□ -1.4
RPGR-201ENST00000318842 CMC4P56277 68 aaPredicted RBP6.28□□□□□ -1.4
RPGR-201ENST00000318842 SPART-AS1P0CW21 52 aa6.27□□□□□ -1.41
RPGR-201ENST00000318842 CXCL6P80162 114 aa6.27□□□□□ -1.41
RPGR-201ENST00000318842 C9orf66Q5T8R8 295 aa6.27□□□□□ -1.41
RPGR-201ENST00000318842 ESRGQ1W209 222 aa6.27□□□□□ -1.41
RPGR-201ENST00000318842 STAB2Q8WWQ8 2551 aa6.27□□□□□ -1.41
RPGR-201ENST00000318842 C7orf33Q8WU49 177 aa6.26□□□□□ -1.41
RPGR-201ENST00000318842 PSPHP1O15172 72 aa6.26□□□□□ -1.41
RPGR-201ENST00000318842 A0A1W2PNM2 257 aa6.25□□□□□ -1.41
RPGR-201ENST00000318842 PRYO14603 147 aa6.25□□□□□ -1.41
RPGR-201ENST00000318842 Q9BRP9 147 aa6.25□□□□□ -1.41
RPGR-201ENST00000318842 OCR1Q9BZK8 76 aa6.25□□□□□ -1.41
RPGR-201ENST00000318842 K7EQZ3 153 aa6.25□□□□□ -1.41
RPGR-201ENST00000318842 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
RPGR-201ENST00000318842 RPL37AP61513 92 aaKnown RBP6.25□□□□□ -1.41
RPGR-201ENST00000318842 FUSP35637 526 aaKnown RBP eCLIP6.24□□□□□ -1.41
RPGR-201ENST00000318842 KRTAP26-1Q6PEX3 210 aa6.24□□□□□ -1.41
RPGR-201ENST00000318842 A0A096LNI7 61 aa6.24□□□□□ -1.41
RPGR-201ENST00000318842 M0R378 163 aa6.24□□□□□ -1.41
RPGR-201ENST00000318842 BCE1O60756 84 aa6.24□□□□□ -1.41
RPGR-201ENST00000318842 NKAPP1Q8N9T2 125 aa6.24□□□□□ -1.41
RPGR-201ENST00000318842 WFDC13Q8IUB5 93 aa6.23□□□□□ -1.41
RPGR-201ENST00000318842 C4orf48Q5BLP8 95 aa6.22□□□□□ -1.41
RPGR-201ENST00000318842 APOC4P55056 127 aa6.22□□□□□ -1.41
RPGR-201ENST00000318842 KRTAP7-1Q8IUC3 87 aa6.22□□□□□ -1.41
RPGR-201ENST00000318842 NDUFC1O43677 76 aa6.21□□□□□ -1.42
RPGR-201ENST00000318842 IGKV2-24A0A0C4DH68 120 aa6.2□□□□□ -1.42
RPGR-201ENST00000318842 PRLHP81277 87 aa6.2□□□□□ -1.42
RPGR-201ENST00000318842 SYCNQ0VAF6 134 aa6.2□□□□□ -1.42
RPGR-201ENST00000318842 C1orf137Q5JT78 98 aa6.2□□□□□ -1.42
RPGR-201ENST00000318842 UBE2BP63146 152 aa6.2□□□□□ -1.42
RPGR-201ENST00000318842 EGFEM1PQ0D2K5 195 aa6.19□□□□□ -1.42
RPGR-201ENST00000318842 KRTAP10-11P60412 298 aa6.19□□□□□ -1.42
RPGR-201ENST00000318842 GVQW2A0A096LPI5 108 aaPredicted RBP6.19□□□□□ -1.42
RPGR-201ENST00000318842 PDE6GP18545 87 aa6.18□□□□□ -1.42
RPGR-201ENST00000318842 DSCR10P59022 87 aa6.18□□□□□ -1.42
RPGR-201ENST00000318842 C1orf64Q8NEQ6 169 aa6.18□□□□□ -1.42
RPGR-201ENST00000318842 MRPL55Q7Z7F7 128 aaKnown RBP6.17□□□□□ -1.42
RPGR-201ENST00000318842 ETDCA0A1B0GVM5 59 aa6.16□□□□□ -1.42
RPGR-201ENST00000318842 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.16□□□□□ -1.42
RPGR-201ENST00000318842 DNAH9Q9NYC9 4486 aa6.15□□□□□ -1.42
RPGR-201ENST00000318842 DEFB131BA0A096LNP1 70 aa6.15□□□□□ -1.43
RPGR-201ENST00000318842 DNAH7Q8WXX0 4024 aa6.15□□□□□ -1.43
RPGR-201ENST00000318842 Q6ZRX8 168 aa6.14□□□□□ -1.43
RPGR-201ENST00000318842 A0A087WSZ3 146 aa6.13□□□□□ -1.43
RPGR-201ENST00000318842 CHTF8P0CG12 524 aa6.13□□□□□ -1.43
RPGR-201ENST00000318842 KCNQ1DNQ9H478 68 aa6.13□□□□□ -1.43
RPGR-201ENST00000318842 LINC00476Q8WZB0 136 aa6.12□□□□□ -1.43
RPGR-201ENST00000318842 PSCAO43653 123 aa6.12□□□□□ -1.43
RPGR-201ENST00000318842 KRTAP11-1Q8IUC1 163 aa6.12□□□□□ -1.43
RPGR-201ENST00000318842 A8MUN3 132 aa6.12□□□□□ -1.43
RPGR-201ENST00000318842 RBM12B-AS1Q9P1G2 102 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms