RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 C14orf177Q52M58 125 aa8.66□□□□□ -1.02
CHMP4C-201ENST00000297265 Q6ZR54 194 aa8.66□□□□□ -1.02
CHMP4C-201ENST00000297265 C14orf132Q9NPU4 83 aa8.66□□□□□ -1.02
CHMP4C-201ENST00000297265 INAFM2P0DMQ5 153 aa8.65□□□□□ -1.02
CHMP4C-201ENST00000297265 SPRR1AP35321 89 aa8.65□□□□□ -1.02
CHMP4C-201ENST00000297265 HECTD4Q9Y4D8 3996 aa8.65□□□□□ -1.03
CHMP4C-201ENST00000297265 A0A1W2PNN7 141 aa8.64□□□□□ -1.03
CHMP4C-201ENST00000297265 FAM19A5Q7Z5A7 132 aaPredicted RBP8.64□□□□□ -1.03
CHMP4C-201ENST00000297265 SNCGO76070 127 aa8.64□□□□□ -1.03
CHMP4C-201ENST00000297265 MRPL55Q7Z7F7 128 aaKnown RBP8.64□□□□□ -1.03
CHMP4C-201ENST00000297265 C9orf163Q8N9P6 203 aa8.64□□□□□ -1.03
CHMP4C-201ENST00000297265 SDIM1Q6ZPB5 146 aa8.63□□□□□ -1.03
CHMP4C-201ENST00000297265 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.62□□□□□ -1.03
CHMP4C-201ENST00000297265 IGKV2-24A0A0C4DH68 120 aa8.62□□□□□ -1.03
CHMP4C-201ENST00000297265 A0A1B0GV72 72 aa8.62□□□□□ -1.03
CHMP4C-201ENST00000297265 ACYP1P07311 99 aa8.61□□□□□ -1.03
CHMP4C-201ENST00000297265 SMCR5Q8TEV8 140 aa8.61□□□□□ -1.03
CHMP4C-201ENST00000297265 B5MCH6 92 aa8.6□□□□□ -1.03
CHMP4C-201ENST00000297265 JMJD7-PLA2G4BH0Y9G9 81 aa8.6□□□□□ -1.03
CHMP4C-201ENST00000297265 PRYO14603 147 aa8.6□□□□□ -1.03
CHMP4C-201ENST00000297265 CHTF8P0CG12 524 aa8.6□□□□□ -1.03
CHMP4C-201ENST00000297265 PCP4P48539 62 aa8.6□□□□□ -1.03
CHMP4C-201ENST00000297265 Q9BRP9 147 aa8.6□□□□□ -1.03
CHMP4C-201ENST00000297265 DNAH6Q9C0G6 4158 aa8.59□□□□□ -1.03
CHMP4C-201ENST00000297265 GAGE2AQ6NT46 116 aa8.59□□□□□ -1.03
CHMP4C-201ENST00000297265 Q6ZRX8 168 aa8.59□□□□□ -1.03
CHMP4C-201ENST00000297265 A0A087WTM6 91 aa8.58□□□□□ -1.04
CHMP4C-201ENST00000297265 DNAH17Q9UFH2 4485 aa8.58□□□□□ -1.04
CHMP4C-201ENST00000297265 PANO1I0J062 215 aa8.57□□□□□ -1.04
CHMP4C-201ENST00000297265 CCKP06307 115 aa8.57□□□□□ -1.04
CHMP4C-201ENST00000297265 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
CHMP4C-201ENST00000297265 LINC01547P58512 204 aaPredicted RBP8.56□□□□□ -1.04
CHMP4C-201ENST00000297265 H3BQ85 93 aa8.55□□□□□ -1.04
CHMP4C-201ENST00000297265 RBM3P98179 157 aaKnown RBP8.55□□□□□ -1.04
CHMP4C-201ENST00000297265 WWC2-AS2Q96NR7 200 aa8.55□□□□□ -1.04
CHMP4C-201ENST00000297265 LINC00846Q9NV44 126 aa8.55□□□□□ -1.04
CHMP4C-201ENST00000297265 LAMTOR3Q9UHA4 124 aa8.55□□□□□ -1.04
CHMP4C-201ENST00000297265 FUSP35637 526 aaKnown RBP eCLIP8.54□□□□□ -1.04
CHMP4C-201ENST00000297265 REG3GQ6UW15 175 aa8.54□□□□□ -1.04
CHMP4C-201ENST00000297265 Q6ZQT0 140 aa8.54□□□□□ -1.04
CHMP4C-201ENST00000297265 FRAS1Q86XX4 4008 aa8.53□□□□□ -1.04
CHMP4C-201ENST00000297265 SCGB1A1P11684 91 aa8.53□□□□□ -1.04
CHMP4C-201ENST00000297265 Q8N377 158 aa8.53□□□□□ -1.04
CHMP4C-201ENST00000297265 LOC110117498A0A087WWA1 95 aa8.53□□□□□ -1.04
CHMP4C-201ENST00000297265 ETDCA0A1B0GVM5 59 aa8.53□□□□□ -1.04
CHMP4C-201ENST00000297265 ERC2-IT1O76042 136 aa8.53□□□□□ -1.04
CHMP4C-201ENST00000297265 NDUFV3P56181 108 aaKnown RBP8.53□□□□□ -1.04
CHMP4C-201ENST00000297265 PHF5AQ7RTV0 110 aaKnown RBP8.53□□□□□ -1.04
CHMP4C-201ENST00000297265 DHRS4-AS1Q9P1J3 65 aa8.53□□□□□ -1.04
CHMP4C-201ENST00000297265 EPM2AB3EWF7 344 aa8.52□□□□□ -1.05
CHMP4C-201ENST00000297265 LY6G6CO95867 125 aa8.52□□□□□ -1.05
CHMP4C-201ENST00000297265 HYDINQ4G0P3 5121 aa8.52□□□□□ -1.05
CHMP4C-201ENST00000297265 LINC00476Q8WZB0 136 aa8.51□□□□□ -1.05
CHMP4C-201ENST00000297265 ALMS1Q8TCU4 4167 aa8.51□□□□□ -1.05
CHMP4C-201ENST00000297265 TRBV7-4A0A0J9YYF1 115 aa8.51□□□□□ -1.05
CHMP4C-201ENST00000297265 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
CHMP4C-201ENST00000297265 GHRHP01286 108 aa8.5□□□□□ -1.05
CHMP4C-201ENST00000297265 LCE2DQ5TA82 110 aaPredicted RBP8.5□□□□□ -1.05
CHMP4C-201ENST00000297265 C1orf134Q5TEV5 83 aa8.5□□□□□ -1.05
CHMP4C-201ENST00000297265 LINC00643Q86TS7 51 aa8.5□□□□□ -1.05
CHMP4C-201ENST00000297265 ST20-AS1Q8NBB2 130 aa8.5□□□□□ -1.05
CHMP4C-201ENST00000297265 IGLV5-48A0A075B6I7 105 aa8.49□□□□□ -1.05
CHMP4C-201ENST00000297265 C21orf62-AS1Q17RA5 79 aa8.49□□□□□ -1.05
CHMP4C-201ENST00000297265 DEFB105AQ8NG35 78 aa8.49□□□□□ -1.05
CHMP4C-201ENST00000297265 SPACA4Q8TDM5 124 aa8.49□□□□□ -1.05
CHMP4C-201ENST00000297265 LINC00474Q9P2X8 69 aa8.49□□□□□ -1.05
CHMP4C-201ENST00000297265 SRRM2Q9UQ35 2752 aaKnown RBP8.48□□□□□ -1.05
CHMP4C-201ENST00000297265 TRBV7-7A0A0K0K1E9 115 aa8.48□□□□□ -1.05
CHMP4C-201ENST00000297265 Q6Q795 121 aa8.48□□□□□ -1.05
CHMP4C-201ENST00000297265 RTL8CO15255 209 aa8.47□□□□□ -1.05
CHMP4C-201ENST00000297265 DSCR8Q96T75 97 aa8.47□□□□□ -1.05
CHMP4C-201ENST00000297265 PKIGQ9Y2B9 76 aa8.47□□□□□ -1.05
CHMP4C-201ENST00000297265 DNAH11Q96DT5 4516 aa8.47□□□□□ -1.05
CHMP4C-201ENST00000297265 PRLHP81277 87 aa8.47□□□□□ -1.05
CHMP4C-201ENST00000297265 UBE2BP63146 152 aa8.46□□□□□ -1.06
CHMP4C-201ENST00000297265 C3orf22Q8N5N4 141 aa8.46□□□□□ -1.06
CHMP4C-201ENST00000297265 DNAH8Q96JB1 4490 aa8.45□□□□□ -1.06
CHMP4C-201ENST00000297265 PDE6GP18545 87 aa8.45□□□□□ -1.06
CHMP4C-201ENST00000297265 TNP2Q05952 138 aa8.45□□□□□ -1.06
CHMP4C-201ENST00000297265 FAM19A1Q7Z5A9 133 aa8.45□□□□□ -1.06
CHMP4C-201ENST00000297265 FAT2Q9NYQ8 4349 aa8.44□□□□□ -1.06
CHMP4C-201ENST00000297265 SMIM29Q86T20 159 aa8.43□□□□□ -1.06
CHMP4C-201ENST00000297265 DNAH5Q8TE73 4624 aa8.43□□□□□ -1.06
CHMP4C-201ENST00000297265 PKD1P98161 4303 aa8.43□□□□□ -1.06
CHMP4C-201ENST00000297265 H0Y9J4 135 aa8.42□□□□□ -1.06
CHMP4C-201ENST00000297265 C3orf84H3BNL1 204 aa8.42□□□□□ -1.06
CHMP4C-201ENST00000297265 IMUPQ9GZP8 106 aa8.42□□□□□ -1.06
CHMP4C-201ENST00000297265 Q6JHZ5 121 aa8.4□□□□□ -1.06
CHMP4C-201ENST00000297265 KRTAP13-1Q8IUC0 172 aa8.4□□□□□ -1.06
CHMP4C-201ENST00000297265 DPH3Q96FX2 82 aa8.4□□□□□ -1.06
CHMP4C-201ENST00000297265 IGLV5-52A0A0A0MRZ9 124 aa8.39□□□□□ -1.07
CHMP4C-201ENST00000297265 HIGD2AQ9BW72 106 aa8.39□□□□□ -1.07
CHMP4C-201ENST00000297265 IGKV3D-7A0A0C4DH55 119 aa8.38□□□□□ -1.07
CHMP4C-201ENST00000297265 PLAC8Q9NZF1 115 aa8.38□□□□□ -1.07
CHMP4C-201ENST00000297265 KRTAP10-2P60368 255 aa8.38□□□□□ -1.07
CHMP4C-201ENST00000297265 BCE1O60756 84 aa8.36□□□□□ -1.07
CHMP4C-201ENST00000297265 Q6ZVQ6 151 aa8.36□□□□□ -1.07
CHMP4C-201ENST00000297265 UBL5Q9BZL1 73 aa8.36□□□□□ -1.07
CHMP4C-201ENST00000297265 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
CHMP4C-201ENST00000297265 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms