RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 SIGMAR1Q99720 223 aa9.63□□□□□ -0.87
CCDC140-201ENST00000295226 PCP4P48539 62 aa9.61□□□□□ -0.87
CCDC140-201ENST00000295226 SMIM11BQ8TCY0 68 aa9.61□□□□□ -0.87
CCDC140-201ENST00000295226 A0A1W2PNN7 141 aa9.61□□□□□ -0.87
CCDC140-201ENST00000295226 Q8NDZ9 215 aa9.61□□□□□ -0.87
CCDC140-201ENST00000295226 SPACA4Q8TDM5 124 aa9.61□□□□□ -0.87
CCDC140-201ENST00000295226 KRTAP7-1Q8IUC3 87 aa9.6□□□□□ -0.87
CCDC140-201ENST00000295226 OR13C6PQ8NH95 151 aa9.6□□□□□ -0.87
CCDC140-201ENST00000295226 TMEM126AQ9H061 195 aa9.6□□□□□ -0.87
CCDC140-201ENST00000295226 SCGB1A1P11684 91 aa9.59□□□□□ -0.87
CCDC140-201ENST00000295226 SERTAD4-AS1Q5TG53 156 aa9.59□□□□□ -0.87
CCDC140-201ENST00000295226 A0A087WYN8 130 aa9.58□□□□□ -0.88
CCDC140-201ENST00000295226 PRR3P79522 188 aaKnown RBP9.58□□□□□ -0.88
CCDC140-201ENST00000295226 Q6ZSA8 131 aa9.58□□□□□ -0.88
CCDC140-201ENST00000295226 FAM19A5Q7Z5A7 132 aaPredicted RBP9.58□□□□□ -0.88
CCDC140-201ENST00000295226 PKIGQ9Y2B9 76 aa9.58□□□□□ -0.88
CCDC140-201ENST00000295226 A0A1B0GX51 115 aa9.58□□□□□ -0.88
CCDC140-201ENST00000295226 DNAL4O96015 105 aa9.58□□□□□ -0.88
CCDC140-201ENST00000295226 LINC00474Q9P2X8 69 aa9.58□□□□□ -0.88
CCDC140-201ENST00000295226 TEX49A0A1B0GTD5 131 aa9.56□□□□□ -0.88
CCDC140-201ENST00000295226 FAM240AA0A1B0GVK7 77 aa9.55□□□□□ -0.88
CCDC140-201ENST00000295226 BAALC-AS2P0C853 105 aa9.55□□□□□ -0.88
CCDC140-201ENST00000295226 SCXQ7RTU7 201 aa9.55□□□□□ -0.88
CCDC140-201ENST00000295226 CIRBP-AS1Q8TBR5 109 aa9.55□□□□□ -0.88
CCDC140-201ENST00000295226 CDIP1Q9H305 208 aa9.55□□□□□ -0.88
CCDC140-201ENST00000295226 SNCGO76070 127 aa9.55□□□□□ -0.88
CCDC140-201ENST00000295226 FAM218AQ96MZ4 157 aa9.55□□□□□ -0.88
CCDC140-201ENST00000295226 VPREB1P12018 145 aa9.54□□□□□ -0.88
CCDC140-201ENST00000295226 XGP55808 180 aa9.54□□□□□ -0.88
CCDC140-201ENST00000295226 APOBP04114 4563 aaKnown RBP9.53□□□□□ -0.88
CCDC140-201ENST00000295226 PLAC8Q9NZF1 115 aa9.53□□□□□ -0.88
CCDC140-201ENST00000295226 NCR3O14931 201 aa9.52□□□□□ -0.89
CCDC140-201ENST00000295226 ACYP1P07311 99 aa9.52□□□□□ -0.89
CCDC140-201ENST00000295226 INAFM2P0DMQ5 153 aa9.52□□□□□ -0.89
CCDC140-201ENST00000295226 PHF5AQ7RTV0 110 aaKnown RBP9.52□□□□□ -0.89
CCDC140-201ENST00000295226 C22orf24Q9Y442 160 aa9.52□□□□□ -0.89
CCDC140-201ENST00000295226 S100A7L2Q5SY68 101 aa9.51□□□□□ -0.89
CCDC140-201ENST00000295226 PLA2G2DQ9UNK4 145 aa9.51□□□□□ -0.89
CCDC140-201ENST00000295226 EPM2AB3EWF7 344 aa9.49□□□□□ -0.89
CCDC140-201ENST00000295226 NKAPP1Q8N9T2 125 aa9.49□□□□□ -0.89
CCDC140-201ENST00000295226 C7orf33Q8WU49 177 aa9.48□□□□□ -0.89
CCDC140-201ENST00000295226 LINC00167Q96N53 147 aa9.48□□□□□ -0.89
CCDC140-201ENST00000295226 IGLV5-37A0A075B6J1 123 aa9.48□□□□□ -0.89
CCDC140-201ENST00000295226 RPL37AP8A6NKH3 93 aa9.48□□□□□ -0.89
CCDC140-201ENST00000295226 IGLV6-57P01721 117 aa9.48□□□□□ -0.89
CCDC140-201ENST00000295226 KRTAP11-1Q8IUC1 163 aa9.48□□□□□ -0.89
CCDC140-201ENST00000295226 ORMDL1Q9P0S3 153 aa9.48□□□□□ -0.89
CCDC140-201ENST00000295226 SMR3BP02814 79 aaPredicted RBP9.47□□□□□ -0.89
CCDC140-201ENST00000295226 MRPL55Q7Z7F7 128 aaKnown RBP9.47□□□□□ -0.89
CCDC140-201ENST00000295226 H3BQ85 93 aa9.45□□□□□ -0.9
CCDC140-201ENST00000295226 M0R378 163 aa9.45□□□□□ -0.9
CCDC140-201ENST00000295226 C6orf99Q4VX62 202 aa9.44□□□□□ -0.9
CCDC140-201ENST00000295226 TRBV10-3A0A0K0K1G6 114 aa9.43□□□□□ -0.9
CCDC140-201ENST00000295226 UBE2BP63146 152 aa9.43□□□□□ -0.9
CCDC140-201ENST00000295226 OBSCN-AS1Q96MR7 158 aa9.43□□□□□ -0.9
CCDC140-201ENST00000295226 KIAA1109Q2LD37 5005 aa9.43□□□□□ -0.9
CCDC140-201ENST00000295226 HSPG2P98160 4391 aa9.43□□□□□ -0.9
CCDC140-201ENST00000295226 TRBV7-6A0A0J9YX20 115 aa9.42□□□□□ -0.9
CCDC140-201ENST00000295226 TMEM256-PLSCR3K7ERE1 68 aa9.42□□□□□ -0.9
CCDC140-201ENST00000295226 MT-ATP8P03928 68 aa9.42□□□□□ -0.9
CCDC140-201ENST00000295226 CDK2AP2O75956 126 aa9.42□□□□□ -0.9
CCDC140-201ENST00000295226 GHRHP01286 108 aa9.42□□□□□ -0.9
CCDC140-201ENST00000295226 RYR1P21817 5038 aa9.42□□□□□ -0.9
CCDC140-201ENST00000295226 IGLV1-50A0A075B6I6 118 aa9.41□□□□□ -0.9
CCDC140-201ENST00000295226 JMJD7-PLA2G4BH0Y9G9 81 aa9.41□□□□□ -0.9
CCDC140-201ENST00000295226 LINC00575Q6W349 94 aa9.41□□□□□ -0.9
CCDC140-201ENST00000295226 TRAV23DV6A0A075B6W5 121 aa9.4□□□□□ -0.9
CCDC140-201ENST00000295226 C21orf62-AS1Q17RA5 79 aa9.4□□□□□ -0.9
CCDC140-201ENST00000295226 DIRC1Q969H9 104 aa9.4□□□□□ -0.9
CCDC140-201ENST00000295226 Q6Q795 121 aa9.39□□□□□ -0.91
CCDC140-201ENST00000295226 KRTAP17-1Q9BYP8 105 aa9.39□□□□□ -0.91
CCDC140-201ENST00000295226 BIRC6Q9NR09 4857 aa9.39□□□□□ -0.91
CCDC140-201ENST00000295226 hADV29S1A0JD25 119 aa9.39□□□□□ -0.91
CCDC140-201ENST00000295226 VPS13BQ7Z7G8 4022 aa9.38□□□□□ -0.91
CCDC140-201ENST00000295226 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
CCDC140-201ENST00000295226 PSORS1C2Q9UIG4 136 aa9.38□□□□□ -0.91
CCDC140-201ENST00000295226 FAT1Q14517 4588 aa9.38□□□□□ -0.91
CCDC140-201ENST00000295226 ZNF73O43830 326 aaPredicted RBP9.36□□□□□ -0.91
CCDC140-201ENST00000295226 COX7BP24311 80 aa9.35□□□□□ -0.91
CCDC140-201ENST00000295226 LINC00643Q86TS7 51 aa9.35□□□□□ -0.91
CCDC140-201ENST00000295226 KCNQ1DNQ9H478 68 aa9.35□□□□□ -0.91
CCDC140-201ENST00000295226 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
CCDC140-201ENST00000295226 GAGE2AQ6NT46 116 aa9.34□□□□□ -0.91
CCDC140-201ENST00000295226 ELOF1P60002 83 aaKnown RBP9.33□□□□□ -0.92
CCDC140-201ENST00000295226 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
CCDC140-201ENST00000295226 IMUPQ9GZP8 106 aa9.33□□□□□ -0.92
CCDC140-201ENST00000295226 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.32□□□□□ -0.92
CCDC140-201ENST00000295226 C14orf132Q9NPU4 83 aa9.32□□□□□ -0.92
CCDC140-201ENST00000295226 TRBV7-7A0A0K0K1E9 115 aa9.32□□□□□ -0.92
CCDC140-201ENST00000295226 PRYO14603 147 aa9.32□□□□□ -0.92
CCDC140-201ENST00000295226 RPL37AP61513 92 aaKnown RBP9.32□□□□□ -0.92
CCDC140-201ENST00000295226 A0A1B0GV72 72 aa9.3□□□□□ -0.92
CCDC140-201ENST00000295226 CCKP06307 115 aa9.29□□□□□ -0.92
CCDC140-201ENST00000295226 BCE1O60756 84 aa9.29□□□□□ -0.92
CCDC140-201ENST00000295226 PDE6GP18545 87 aa9.29□□□□□ -0.92
CCDC140-201ENST00000295226 SPRR1AP35321 89 aa9.29□□□□□ -0.92
CCDC140-201ENST00000295226 FAM19A1Q7Z5A9 133 aa9.29□□□□□ -0.92
CCDC140-201ENST00000295226 SRRM2Q9UQ35 2752 aaKnown RBP9.28□□□□□ -0.92
CCDC140-201ENST00000295226 KRTAP4-16G5E9R7 235 aaPredicted RBP9.28□□□□□ -0.92
CCDC140-201ENST00000295226 FAM229AH3BQW9 127 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms