RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CHTF8P0CG12 524 aa10.38□□□□□ -0.75
TPM1-201ENST00000267996 ELOF1P60002 83 aaKnown RBP10.38□□□□□ -0.75
TPM1-201ENST00000267996 LINC00474Q9P2X8 69 aa10.38□□□□□ -0.75
TPM1-201ENST00000267996 RTL8CO15255 209 aa10.38□□□□□ -0.75
TPM1-201ENST00000267996 BAALC-AS2P0C853 105 aa10.38□□□□□ -0.75
TPM1-201ENST00000267996 COX7BP24311 80 aa10.38□□□□□ -0.75
TPM1-201ENST00000267996 DNAH11Q96DT5 4516 aa10.37□□□□□ -0.75
TPM1-201ENST00000267996 PRYO14603 147 aa10.37□□□□□ -0.75
TPM1-201ENST00000267996 TNP2Q05952 138 aa10.37□□□□□ -0.75
TPM1-201ENST00000267996 HYDINQ4G0P3 5121 aa10.36□□□□□ -0.75
TPM1-201ENST00000267996 SPRR1AP35321 89 aa10.36□□□□□ -0.75
TPM1-201ENST00000267996 RPL37AP8A6NKH3 93 aa10.35□□□□□ -0.75
TPM1-201ENST00000267996 FAT2Q9NYQ8 4349 aa10.34□□□□□ -0.75
TPM1-201ENST00000267996 hADV29S1A0JD25 119 aa10.34□□□□□ -0.75
TPM1-201ENST00000267996 EPM2AB3EWF7 344 aa10.34□□□□□ -0.75
TPM1-201ENST00000267996 KRTAP4-16G5E9R7 235 aaPredicted RBP10.34□□□□□ -0.75
TPM1-201ENST00000267996 SNCGO76070 127 aa10.34□□□□□ -0.75
TPM1-201ENST00000267996 LINC00528Q8N1L1 170 aa10.34□□□□□ -0.75
TPM1-201ENST00000267996 PANO1I0J062 215 aa10.34□□□□□ -0.75
TPM1-201ENST00000267996 PPDPFLQ8WWR9 84 aa10.34□□□□□ -0.75
TPM1-201ENST00000267996 SPACA4Q8TDM5 124 aa10.33□□□□□ -0.76
TPM1-201ENST00000267996 K7ERU9 68 aa10.32□□□□□ -0.76
TPM1-201ENST00000267996 FUSP35637 526 aaKnown RBP eCLIP10.32□□□□□ -0.76
TPM1-201ENST00000267996 ORMDL1Q9P0S3 153 aa10.32□□□□□ -0.76
TPM1-201ENST00000267996 IGLV5-52A0A0A0MRZ9 124 aa10.31□□□□□ -0.76
TPM1-201ENST00000267996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.31□□□□□ -0.76
TPM1-201ENST00000267996 LCE6AA0A183 80 aa10.29□□□□□ -0.76
TPM1-201ENST00000267996 B5MCH6 92 aa10.29□□□□□ -0.76
TPM1-201ENST00000267996 INAFM2P0DMQ5 153 aa10.29□□□□□ -0.76
TPM1-201ENST00000267996 DNAH5Q8TE73 4624 aa10.29□□□□□ -0.76
TPM1-201ENST00000267996 TEX49A0A1B0GTD5 131 aa10.28□□□□□ -0.76
TPM1-201ENST00000267996 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.28□□□□□ -0.76
TPM1-201ENST00000267996 PHF5AQ7RTV0 110 aaKnown RBP10.28□□□□□ -0.76
TPM1-201ENST00000267996 REG3GQ6UW15 175 aa10.28□□□□□ -0.76
TPM1-201ENST00000267996 Q6ZRX8 168 aa10.28□□□□□ -0.76
TPM1-201ENST00000267996 ETDCA0A1B0GVM5 59 aa10.27□□□□□ -0.77
TPM1-201ENST00000267996 J3QR89 54 aa10.27□□□□□ -0.77
TPM1-201ENST00000267996 DNAH8Q96JB1 4490 aa10.26□□□□□ -0.77
TPM1-201ENST00000267996 TMEM256-PLSCR3K7ERE1 68 aa10.26□□□□□ -0.77
TPM1-201ENST00000267996 Q6ZQY7 126 aa10.26□□□□□ -0.77
TPM1-201ENST00000267996 H3BQ85 93 aa10.25□□□□□ -0.77
TPM1-201ENST00000267996 KRTAP10-2P60368 255 aa10.25□□□□□ -0.77
TPM1-201ENST00000267996 KRTAP11-1Q8IUC1 163 aa10.25□□□□□ -0.77
TPM1-201ENST00000267996 OBSCN-AS1Q96MR7 158 aa10.25□□□□□ -0.77
TPM1-201ENST00000267996 DHRS4-AS1Q9P1J3 65 aa10.25□□□□□ -0.77
TPM1-201ENST00000267996 DPH3Q96FX2 82 aa10.24□□□□□ -0.77
TPM1-201ENST00000267996 Q9BRP9 147 aa10.24□□□□□ -0.77
TPM1-201ENST00000267996 PKD1P98161 4303 aa10.23□□□□□ -0.77
TPM1-201ENST00000267996 PLAC8Q9NZF1 115 aa10.23□□□□□ -0.77
TPM1-201ENST00000267996 UBE2BP63146 152 aa10.22□□□□□ -0.77
TPM1-201ENST00000267996 GHRHP01286 108 aa10.21□□□□□ -0.78
TPM1-201ENST00000267996 H0Y9J4 135 aa10.18□□□□□ -0.78
TPM1-201ENST00000267996 JMJD7-PLA2G4BH0Y9G9 81 aa10.17□□□□□ -0.78
TPM1-201ENST00000267996 FAM19A1Q7Z5A9 133 aa10.17□□□□□ -0.78
TPM1-201ENST00000267996 SMCR5Q8TEV8 140 aa10.17□□□□□ -0.78
TPM1-201ENST00000267996 ERC2-IT1O76042 136 aa10.15□□□□□ -0.78
TPM1-201ENST00000267996 LINC01547P58512 204 aaPredicted RBP10.15□□□□□ -0.78
TPM1-201ENST00000267996 LINC00336Q6ZUF6 198 aa10.15□□□□□ -0.79
TPM1-201ENST00000267996 RYR2Q92736 4967 aa10.14□□□□□ -0.79
TPM1-201ENST00000267996 IGLV5-48A0A075B6I7 105 aa10.14□□□□□ -0.79
TPM1-201ENST00000267996 BCE1O60756 84 aa10.14□□□□□ -0.79
TPM1-201ENST00000267996 PRLHP81277 87 aa10.14□□□□□ -0.79
TPM1-201ENST00000267996 Q6ZSA8 131 aa10.14□□□□□ -0.79
TPM1-201ENST00000267996 Q8N377 158 aa10.14□□□□□ -0.79
TPM1-201ENST00000267996 KRTAP10-1P60331 282 aa10.13□□□□□ -0.79
TPM1-201ENST00000267996 C14orf132Q9NPU4 83 aa10.13□□□□□ -0.79
TPM1-201ENST00000267996 FAM30AQ9NZY2 134 aa10.13□□□□□ -0.79
TPM1-201ENST00000267996 FAM240AA0A1B0GVK7 77 aa10.12□□□□□ -0.79
TPM1-201ENST00000267996 KRTAP13-1Q8IUC0 172 aa10.12□□□□□ -0.79
TPM1-201ENST00000267996 ST20-AS1Q8NBB2 130 aa10.12□□□□□ -0.79
TPM1-201ENST00000267996 LAMTOR3Q9UHA4 124 aa10.12□□□□□ -0.79
TPM1-201ENST00000267996 NDUFV3P56181 108 aaKnown RBP10.11□□□□□ -0.79
TPM1-201ENST00000267996 VPS25Q9BRG1 176 aa10.1□□□□□ -0.79
TPM1-201ENST00000267996 CDIP1Q9H305 208 aa10.1□□□□□ -0.79
TPM1-201ENST00000267996 RBM3P98179 157 aaKnown RBP10.09□□□□□ -0.79
TPM1-201ENST00000267996 A0A1B0GV72 72 aa10.09□□□□□ -0.79
TPM1-201ENST00000267996 UBE2AP49459 152 aa10.09□□□□□ -0.79
TPM1-201ENST00000267996 DEFB105AQ8NG35 78 aa10.09□□□□□ -0.79
TPM1-201ENST00000267996 KMT2CQ8NEZ4 4911 aaKnown RBP10.08□□□□□ -0.8
TPM1-201ENST00000267996 LOC110117498A0A087WWA1 95 aa10.08□□□□□ -0.8
TPM1-201ENST00000267996 CIRBP-AS1Q8TBR5 109 aa10.08□□□□□ -0.8
TPM1-201ENST00000267996 HIGD2AQ9BW72 106 aa10.08□□□□□ -0.8
TPM1-201ENST00000267996 PSORS1C2Q9UIG4 136 aa10.08□□□□□ -0.8
TPM1-201ENST00000267996 ACYP1P07311 99 aa10.07□□□□□ -0.8
TPM1-201ENST00000267996 CCKP06307 115 aa10.06□□□□□ -0.8
TPM1-201ENST00000267996 SCXQ7RTU7 201 aa10.06□□□□□ -0.8
TPM1-201ENST00000267996 TRBV7-4A0A0J9YYF1 115 aa10.05□□□□□ -0.8
TPM1-201ENST00000267996 A0A1B0GVY2 172 aa10.05□□□□□ -0.8
TPM1-201ENST00000267996 GAGE2AQ6NT46 116 aa10.05□□□□□ -0.8
TPM1-201ENST00000267996 Q6ZQT0 140 aa10.05□□□□□ -0.8
TPM1-201ENST00000267996 LRP1BQ9NZR2 4599 aa10.04□□□□□ -0.8
TPM1-201ENST00000267996 PDE6GP18545 87 aa10.04□□□□□ -0.8
TPM1-201ENST00000267996 PKHD1P08F94 4074 aa10.04□□□□□ -0.8
TPM1-201ENST00000267996 DSCR8Q96T75 97 aa10.03□□□□□ -0.8
TPM1-201ENST00000267996 SMIM29Q86T20 159 aa10.02□□□□□ -0.8
TPM1-201ENST00000267996 SPRR1BP22528 89 aa10.02□□□□□ -0.81
TPM1-201ENST00000267996 DYNC1H1Q14204 4646 aaKnown RBP10.01□□□□□ -0.81
TPM1-201ENST00000267996 C1orf137Q5JT78 98 aa10.01□□□□□ -0.81
TPM1-201ENST00000267996 C3orf22Q8N5N4 141 aa10.01□□□□□ -0.81
TPM1-201ENST00000267996 ZNF861PO60384 105 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms