RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 CDIP1Q9H305 208 aa10.07□□□□□ -0.8
VPS26A-201ENST00000263559 A0A1W2PNN7 141 aa10.07□□□□□ -0.8
VPS26A-201ENST00000263559 TMEM256-PLSCR3K7ERE1 68 aa10.07□□□□□ -0.8
VPS26A-201ENST00000263559 Q6ZQY7 126 aa10.06□□□□□ -0.8
VPS26A-201ENST00000263559 A0A087WTM6 91 aa10.06□□□□□ -0.8
VPS26A-201ENST00000263559 CHTF8P0CG12 524 aa10.06□□□□□ -0.8
VPS26A-201ENST00000263559 OBSCN-AS1Q96MR7 158 aa10.05□□□□□ -0.8
VPS26A-201ENST00000263559 PRYO14603 147 aa10.04□□□□□ -0.8
VPS26A-201ENST00000263559 INAFM2P0DMQ5 153 aa10.04□□□□□ -0.8
VPS26A-201ENST00000263559 SDIM1Q6ZPB5 146 aa10.04□□□□□ -0.8
VPS26A-201ENST00000263559 LINC00476Q8WZB0 136 aa10.03□□□□□ -0.8
VPS26A-201ENST00000263559 A0A1B0GV72 72 aa10.03□□□□□ -0.8
VPS26A-201ENST00000263559 KRTAP4-16G5E9R7 235 aaPredicted RBP10.02□□□□□ -0.8
VPS26A-201ENST00000263559 SPRR1AP35321 89 aa10.02□□□□□ -0.8
VPS26A-201ENST00000263559 C14orf132Q9NPU4 83 aa10.02□□□□□ -0.8
VPS26A-201ENST00000263559 C1orf134Q5TEV5 83 aa10.02□□□□□ -0.81
VPS26A-201ENST00000263559 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.02□□□□□ -0.81
VPS26A-201ENST00000263559 B5MCH6 92 aa10□□□□□ -0.81
VPS26A-201ENST00000263559 FUSP35637 526 aaKnown RBP eCLIP10□□□□□ -0.81
VPS26A-201ENST00000263559 PKIGQ9Y2B9 76 aa10□□□□□ -0.81
VPS26A-201ENST00000263559 FAM240AA0A1B0GVK7 77 aa9.99□□□□□ -0.81
VPS26A-201ENST00000263559 Q6ZRX8 168 aa9.99□□□□□ -0.81
VPS26A-201ENST00000263559 SIGMAR1Q99720 223 aa9.99□□□□□ -0.81
VPS26A-201ENST00000263559 DNAH6Q9C0G6 4158 aa9.99□□□□□ -0.81
VPS26A-201ENST00000263559 ETDCA0A1B0GVM5 59 aa9.99□□□□□ -0.81
VPS26A-201ENST00000263559 JMJD7-PLA2G4BH0Y9G9 81 aa9.99□□□□□ -0.81
VPS26A-201ENST00000263559 PANO1I0J062 215 aa9.99□□□□□ -0.81
VPS26A-201ENST00000263559 C3orf84H3BNL1 204 aa9.98□□□□□ -0.81
VPS26A-201ENST00000263559 REG3GQ6UW15 175 aa9.98□□□□□ -0.81
VPS26A-201ENST00000263559 XGP55808 180 aa9.97□□□□□ -0.81
VPS26A-201ENST00000263559 GAGE2AQ6NT46 116 aa9.97□□□□□ -0.81
VPS26A-201ENST00000263559 DNAH17Q9UFH2 4485 aa9.97□□□□□ -0.81
VPS26A-201ENST00000263559 H3BQ85 93 aa9.97□□□□□ -0.81
VPS26A-201ENST00000263559 Q9BRP9 147 aa9.97□□□□□ -0.81
VPS26A-201ENST00000263559 LAMTOR3Q9UHA4 124 aa9.97□□□□□ -0.81
VPS26A-201ENST00000263559 PHF5AQ7RTV0 110 aaKnown RBP9.96□□□□□ -0.81
VPS26A-201ENST00000263559 LINC00474Q9P2X8 69 aa9.96□□□□□ -0.81
VPS26A-201ENST00000263559 ALMS1Q8TCU4 4167 aa9.96□□□□□ -0.82
VPS26A-201ENST00000263559 HECTD4Q9Y4D8 3996 aa9.96□□□□□ -0.82
VPS26A-201ENST00000263559 RTL8CO15255 209 aa9.95□□□□□ -0.82
VPS26A-201ENST00000263559 ACYP1P07311 99 aa9.95□□□□□ -0.82
VPS26A-201ENST00000263559 DHRS4-AS1Q9P1J3 65 aa9.95□□□□□ -0.82
VPS26A-201ENST00000263559 GHRHP01286 108 aa9.94□□□□□ -0.82
VPS26A-201ENST00000263559 MT-ATP8P03928 68 aa9.94□□□□□ -0.82
VPS26A-201ENST00000263559 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.94□□□□□ -0.82
VPS26A-201ENST00000263559 KRTAP11-1Q8IUC1 163 aa9.93□□□□□ -0.82
VPS26A-201ENST00000263559 DPH3Q96FX2 82 aa9.93□□□□□ -0.82
VPS26A-201ENST00000263559 HYDINQ4G0P3 5121 aa9.93□□□□□ -0.82
VPS26A-201ENST00000263559 RBM3P98179 157 aaKnown RBP9.92□□□□□ -0.82
VPS26A-201ENST00000263559 TNP2Q05952 138 aa9.92□□□□□ -0.82
VPS26A-201ENST00000263559 SPACA4Q8TDM5 124 aa9.92□□□□□ -0.82
VPS26A-201ENST00000263559 UBE2BP63146 152 aa9.91□□□□□ -0.82
VPS26A-201ENST00000263559 CCKP06307 115 aa9.9□□□□□ -0.82
VPS26A-201ENST00000263559 DEFB105AQ8NG35 78 aa9.9□□□□□ -0.82
VPS26A-201ENST00000263559 ERC2-IT1O76042 136 aa9.9□□□□□ -0.82
VPS26A-201ENST00000263559 NDUFV3P56181 108 aaKnown RBP9.9□□□□□ -0.82
VPS26A-201ENST00000263559 IGLV5-52A0A0A0MRZ9 124 aa9.89□□□□□ -0.83
VPS26A-201ENST00000263559 LINC01547P58512 204 aaPredicted RBP9.89□□□□□ -0.83
VPS26A-201ENST00000263559 FAM19A1Q7Z5A9 133 aa9.89□□□□□ -0.83
VPS26A-201ENST00000263559 Q8N377 158 aa9.89□□□□□ -0.83
VPS26A-201ENST00000263559 ST20-AS1Q8NBB2 130 aa9.89□□□□□ -0.83
VPS26A-201ENST00000263559 SMCR5Q8TEV8 140 aa9.89□□□□□ -0.83
VPS26A-201ENST00000263559 PRLHP81277 87 aa9.88□□□□□ -0.83
VPS26A-201ENST00000263559 FRAS1Q86XX4 4008 aa9.87□□□□□ -0.83
VPS26A-201ENST00000263559 EPM2AB3EWF7 344 aa9.87□□□□□ -0.83
VPS26A-201ENST00000263559 Q6ZQT0 140 aa9.87□□□□□ -0.83
VPS26A-201ENST00000263559 LOC110117498A0A087WWA1 95 aa9.86□□□□□ -0.83
VPS26A-201ENST00000263559 DSCR8Q96T75 97 aa9.86□□□□□ -0.83
VPS26A-201ENST00000263559 LINC00846Q9NV44 126 aa9.85□□□□□ -0.83
VPS26A-201ENST00000263559 IGLV5-48A0A075B6I7 105 aa9.84□□□□□ -0.83
VPS26A-201ENST00000263559 TRBV7-4A0A0J9YYF1 115 aa9.83□□□□□ -0.84
VPS26A-201ENST00000263559 C3orf22Q8N5N4 141 aa9.83□□□□□ -0.84
VPS26A-201ENST00000263559 HIGD2AQ9BW72 106 aa9.82□□□□□ -0.84
VPS26A-201ENST00000263559 DNAH11Q96DT5 4516 aa9.82□□□□□ -0.84
VPS26A-201ENST00000263559 PDE6GP18545 87 aa9.81□□□□□ -0.84
VPS26A-201ENST00000263559 KRTAP10-2P60368 255 aa9.81□□□□□ -0.84
VPS26A-201ENST00000263559 PCP4P48539 62 aa9.81□□□□□ -0.84
VPS26A-201ENST00000263559 LINC00643Q86TS7 51 aa9.81□□□□□ -0.84
VPS26A-201ENST00000263559 H0Y9J4 135 aa9.79□□□□□ -0.84
VPS26A-201ENST00000263559 PLAC8Q9NZF1 115 aa9.79□□□□□ -0.84
VPS26A-201ENST00000263559 DNAH5Q8TE73 4624 aa9.79□□□□□ -0.84
VPS26A-201ENST00000263559 DNAH8Q96JB1 4490 aa9.78□□□□□ -0.84
VPS26A-201ENST00000263559 BCE1O60756 84 aa9.78□□□□□ -0.84
VPS26A-201ENST00000263559 SCGB1A1P11684 91 aa9.78□□□□□ -0.84
VPS26A-201ENST00000263559 UBE2AP49459 152 aa9.78□□□□□ -0.84
VPS26A-201ENST00000263559 FAT2Q9NYQ8 4349 aa9.77□□□□□ -0.85
VPS26A-201ENST00000263559 SMIM29Q86T20 159 aa9.76□□□□□ -0.85
VPS26A-201ENST00000263559 SACSQ9NZJ4 4579 aa9.76□□□□□ -0.85
VPS26A-201ENST00000263559 PKD1P98161 4303 aa9.75□□□□□ -0.85
VPS26A-201ENST00000263559 KRTAP13-1Q8IUC0 172 aa9.75□□□□□ -0.85
VPS26A-201ENST00000263559 TRBV7-7A0A0K0K1E9 115 aa9.74□□□□□ -0.85
VPS26A-201ENST00000263559 Q6Q795 121 aa9.73□□□□□ -0.85
VPS26A-201ENST00000263559 SRRM2Q9UQ35 2752 aaKnown RBP9.73□□□□□ -0.85
VPS26A-201ENST00000263559 FAM30AQ9NZY2 134 aa9.73□□□□□ -0.85
VPS26A-201ENST00000263559 PSORS1C2Q9UIG4 136 aa9.72□□□□□ -0.85
VPS26A-201ENST00000263559 UBL5Q9BZL1 73 aa9.71□□□□□ -0.85
VPS26A-201ENST00000263559 Q6JHZ5 121 aa9.71□□□□□ -0.86
VPS26A-201ENST00000263559 IGKV3D-7A0A0C4DH55 119 aa9.7□□□□□ -0.86
VPS26A-201ENST00000263559 C1orf137Q5JT78 98 aa9.7□□□□□ -0.86
VPS26A-201ENST00000263559 C21orf62-AS1Q17RA5 79 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms