RNA–Protein interactions for RNA: ENST00000255476.2

RFXAP-201, Transcript of regulatory factor X associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFXAP, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-201ENST00000255476 LY6G6CO95867 125 aa13.67□□□□□ -0.22
RFXAP-201ENST00000255476 BAALC-AS2P0C853 105 aa13.66□□□□□ -0.22
RFXAP-201ENST00000255476 TRBV10-3A0A0K0K1G6 114 aa13.64□□□□□ -0.23
RFXAP-201ENST00000255476 IGLV6-57P01721 117 aa13.64□□□□□ -0.23
RFXAP-201ENST00000255476 INAFM2P0DMQ5 153 aa13.64□□□□□ -0.23
RFXAP-201ENST00000255476 OXTP01178 125 aa13.64□□□□□ -0.23
RFXAP-201ENST00000255476 SERTAD4-AS1Q5TG53 156 aa13.64□□□□□ -0.23
RFXAP-201ENST00000255476 Q6ZR54 194 aa13.64□□□□□ -0.23
RFXAP-201ENST00000255476 DNAH2Q9P225 4427 aa13.64□□□□□ -0.23
RFXAP-201ENST00000255476 FAM168BA1KXE4 195 aa13.63□□□□□ -0.23
RFXAP-201ENST00000255476 CNBPP62633 177 aaKnown RBP13.63□□□□□ -0.23
RFXAP-201ENST00000255476 A0A087WYN8 130 aa13.62□□□□□ -0.23
RFXAP-201ENST00000255476 C6orf99Q4VX62 202 aa13.61□□□□□ -0.23
RFXAP-201ENST00000255476 C14orf177Q52M58 125 aa13.61□□□□□ -0.23
RFXAP-201ENST00000255476 SERP2Q8N6R1 65 aa13.59□□□□□ -0.23
RFXAP-201ENST00000255476 M0R378 163 aa13.59□□□□□ -0.23
RFXAP-201ENST00000255476 LINC00476Q8WZB0 136 aa13.59□□□□□ -0.23
RFXAP-201ENST00000255476 H0YGX0 51 aa13.58□□□□□ -0.23
RFXAP-201ENST00000255476 Q5XG85 94 aa13.57□□□□□ -0.24
RFXAP-201ENST00000255476 KRTAP7-1Q8IUC3 87 aa13.57□□□□□ -0.24
RFXAP-201ENST00000255476 DSCR8Q96T75 97 aa13.57□□□□□ -0.24
RFXAP-201ENST00000255476 A0A096LNI7 61 aa13.56□□□□□ -0.24
RFXAP-201ENST00000255476 IGKV2-24A0A0C4DH68 120 aa13.56□□□□□ -0.24
RFXAP-201ENST00000255476 C4orf26Q17RF5 130 aa13.56□□□□□ -0.24
RFXAP-201ENST00000255476 NKAPP1Q8N9T2 125 aa13.56□□□□□ -0.24
RFXAP-201ENST00000255476 TRAV23DV6A0A075B6W5 121 aa13.56□□□□□ -0.24
RFXAP-201ENST00000255476 Q6JHZ5 121 aa13.55□□□□□ -0.24
RFXAP-201ENST00000255476 Q8N814 137 aa13.54□□□□□ -0.24
RFXAP-201ENST00000255476 C7orf33Q8WU49 177 aa13.54□□□□□ -0.24
RFXAP-201ENST00000255476 A0A087WTM6 91 aa13.53□□□□□ -0.24
RFXAP-201ENST00000255476 FUSP35637 526 aaKnown RBP eCLIP13.53□□□□□ -0.24
RFXAP-201ENST00000255476 PLA2G2DQ9UNK4 145 aa13.53□□□□□ -0.24
RFXAP-201ENST00000255476 C3orf84H3BNL1 204 aa13.52□□□□□ -0.25
RFXAP-201ENST00000255476 C16orf90A8MZG2 172 aa13.51□□□□□ -0.25
RFXAP-201ENST00000255476 C1orf134Q5TEV5 83 aa13.51□□□□□ -0.25
RFXAP-201ENST00000255476 ZNF73O43830 326 aaPredicted RBP13.51□□□□□ -0.25
RFXAP-201ENST00000255476 DNAL4O96015 105 aa13.51□□□□□ -0.25
RFXAP-201ENST00000255476 C9orf163Q8N9P6 203 aa13.51□□□□□ -0.25
RFXAP-201ENST00000255476 IGKV3D-7A0A0C4DH55 119 aa13.5□□□□□ -0.25
RFXAP-201ENST00000255476 CHTF8P0CG12 524 aa13.5□□□□□ -0.25
RFXAP-201ENST00000255476 RPL37AP8A6NKH3 93 aa13.5□□□□□ -0.25
RFXAP-201ENST00000255476 HRCT1Q6UXD1 115 aa13.5□□□□□ -0.25
RFXAP-201ENST00000255476 OBSCN-AS1Q96MR7 158 aa13.5□□□□□ -0.25
RFXAP-201ENST00000255476 HYDINQ4G0P3 5121 aa13.49□□□□□ -0.25
RFXAP-201ENST00000255476 A0A087WVE0 104 aa13.49□□□□□ -0.25
RFXAP-201ENST00000255476 DIRC1Q969H9 104 aa13.49□□□□□ -0.25
RFXAP-201ENST00000255476 LINC00846Q9NV44 126 aa13.49□□□□□ -0.25
RFXAP-201ENST00000255476 ALMS1Q8TCU4 4167 aa13.49□□□□□ -0.25
RFXAP-201ENST00000255476 DNAH6Q9C0G6 4158 aa13.47□□□□□ -0.25
RFXAP-201ENST00000255476 IGLV5-37A0A075B6J1 123 aa13.47□□□□□ -0.25
RFXAP-201ENST00000255476 A0A1W2PNN7 141 aa13.46□□□□□ -0.25
RFXAP-201ENST00000255476 LINC00167Q96N53 147 aa13.46□□□□□ -0.25
RFXAP-201ENST00000255476 C14orf132Q9NPU4 83 aa13.46□□□□□ -0.25
RFXAP-201ENST00000255476 LINC00575Q6W349 94 aa13.46□□□□□ -0.26
RFXAP-201ENST00000255476 HECTD4Q9Y4D8 3996 aa13.45□□□□□ -0.26
RFXAP-201ENST00000255476 MRPL55Q7Z7F7 128 aaKnown RBP13.44□□□□□ -0.26
RFXAP-201ENST00000255476 KCNQ1DNQ9H478 68 aa13.44□□□□□ -0.26
RFXAP-201ENST00000255476 DNAH17Q9UFH2 4485 aa13.43□□□□□ -0.26
RFXAP-201ENST00000255476 IGLV1-50A0A075B6I6 118 aa13.42□□□□□ -0.26
RFXAP-201ENST00000255476 COX7BP24311 80 aa13.42□□□□□ -0.26
RFXAP-201ENST00000255476 PANO1I0J062 215 aa13.41□□□□□ -0.26
RFXAP-201ENST00000255476 ELOF1P60002 83 aaKnown RBP13.41□□□□□ -0.26
RFXAP-201ENST00000255476 TNP2Q05952 138 aa13.4□□□□□ -0.26
RFXAP-201ENST00000255476 RTL8CO15255 209 aa13.38□□□□□ -0.27
RFXAP-201ENST00000255476 ORMDL1Q9P0S3 153 aa13.38□□□□□ -0.27
RFXAP-201ENST00000255476 FRAS1Q86XX4 4008 aa13.38□□□□□ -0.27
RFXAP-201ENST00000255476 TRBV7-6A0A0J9YX20 115 aa13.36□□□□□ -0.27
RFXAP-201ENST00000255476 LINC00528Q8N1L1 170 aa13.36□□□□□ -0.27
RFXAP-201ENST00000255476 EPM2AB3EWF7 344 aa13.35□□□□□ -0.27
RFXAP-201ENST00000255476 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.35□□□□□ -0.27
RFXAP-201ENST00000255476 Q6ZQY7 126 aa13.34□□□□□ -0.27
RFXAP-201ENST00000255476 PRYO14603 147 aa13.34□□□□□ -0.27
RFXAP-201ENST00000255476 PHF5AQ7RTV0 110 aaKnown RBP13.34□□□□□ -0.27
RFXAP-201ENST00000255476 KRTAP4-16G5E9R7 235 aaPredicted RBP13.33□□□□□ -0.28
RFXAP-201ENST00000255476 GHRHP01286 108 aa13.32□□□□□ -0.28
RFXAP-201ENST00000255476 SPRR1AP35321 89 aa13.31□□□□□ -0.28
RFXAP-201ENST00000255476 PKIGQ9Y2B9 76 aa13.31□□□□□ -0.28
RFXAP-201ENST00000255476 IGLV5-52A0A0A0MRZ9 124 aa13.31□□□□□ -0.28
RFXAP-201ENST00000255476 KRTAP11-1Q8IUC1 163 aa13.3□□□□□ -0.28
RFXAP-201ENST00000255476 LINC00474Q9P2X8 69 aa13.3□□□□□ -0.28
RFXAP-201ENST00000255476 SACSQ9NZJ4 4579 aa13.3□□□□□ -0.28
RFXAP-201ENST00000255476 CCKP06307 115 aa13.29□□□□□ -0.28
RFXAP-201ENST00000255476 ETDCA0A1B0GVM5 59 aa13.29□□□□□ -0.28
RFXAP-201ENST00000255476 ATP5EP2Q5VTU8 51 aa13.29□□□□□ -0.28
RFXAP-201ENST00000255476 REG3GQ6UW15 175 aa13.29□□□□□ -0.28
RFXAP-201ENST00000255476 SPACA4Q8TDM5 124 aa13.29□□□□□ -0.28
RFXAP-201ENST00000255476 PRO0628Q9UI54 55 aa13.28□□□□□ -0.28
RFXAP-201ENST00000255476 FAM236DA0A1B0GTK5 79 aa13.28□□□□□ -0.28
RFXAP-201ENST00000255476 FAM236CP0DP71 79 aa13.28□□□□□ -0.28
RFXAP-201ENST00000255476 Q6ZRX8 168 aa13.28□□□□□ -0.28
RFXAP-201ENST00000255476 DNAH11Q96DT5 4516 aa13.27□□□□□ -0.28
RFXAP-201ENST00000255476 TMEM256-PLSCR3K7ERE1 68 aa13.27□□□□□ -0.29
RFXAP-201ENST00000255476 Q9BRP9 147 aa13.27□□□□□ -0.29
RFXAP-201ENST00000255476 KRTAP10-2P60368 255 aa13.26□□□□□ -0.29
RFXAP-201ENST00000255476 FAT2Q9NYQ8 4349 aa13.25□□□□□ -0.29
RFXAP-201ENST00000255476 UBE2BP63146 152 aa13.25□□□□□ -0.29
RFXAP-201ENST00000255476 LINC00336Q6ZUF6 198 aa13.25□□□□□ -0.29
RFXAP-201ENST00000255476 C20orf197Q8N268 126 aa13.25□□□□□ -0.29
RFXAP-201ENST00000255476 SERP1Q9Y6X1 66 aa13.25□□□□□ -0.29
RFXAP-201ENST00000255476 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms