RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 RETNQ9HD89 108 aa10.27□□□□□ -0.77
CTSD-201ENST00000236671 M0R378 163 aa10.26□□□□□ -0.77
CTSD-201ENST00000236671 HAMPP81172 84 aa10.26□□□□□ -0.77
CTSD-201ENST00000236671 DPH3Q96FX2 82 aa10.25□□□□□ -0.77
CTSD-201ENST00000236671 NDUFC2-KCTD14E9PQ53 114 aa10.25□□□□□ -0.77
CTSD-201ENST00000236671 CXCL6P80162 114 aa10.24□□□□□ -0.77
CTSD-201ENST00000236671 Q6ZTC4 211 aa10.24□□□□□ -0.77
CTSD-201ENST00000236671 LINC00528Q8N1L1 170 aa10.24□□□□□ -0.77
CTSD-201ENST00000236671 CSMD3Q7Z407 3707 aa10.23□□□□□ -0.77
CTSD-201ENST00000236671 BCE1O60756 84 aa10.23□□□□□ -0.77
CTSD-201ENST00000236671 FAM19A5Q7Z5A7 132 aaPredicted RBP10.23□□□□□ -0.77
CTSD-201ENST00000236671 ESRGQ1W209 222 aa10.21□□□□□ -0.77
CTSD-201ENST00000236671 C20orf197Q8N268 126 aa10.21□□□□□ -0.77
CTSD-201ENST00000236671 TRAV7A0A075B6U4 112 aa10.21□□□□□ -0.78
CTSD-201ENST00000236671 Q6ZRP5 223 aa10.21□□□□□ -0.78
CTSD-201ENST00000236671 OXTP01178 125 aa10.2□□□□□ -0.78
CTSD-201ENST00000236671 TRAV10A0A0B4J240 114 aa10.19□□□□□ -0.78
CTSD-201ENST00000236671 C1orf43Q9BWL3 253 aa10.19□□□□□ -0.78
CTSD-201ENST00000236671 LINC01556Q5JQF7 62 aa10.17□□□□□ -0.78
CTSD-201ENST00000236671 SCXQ7RTU7 201 aa10.17□□□□□ -0.78
CTSD-201ENST00000236671 LYSTQ99698 3801 aa10.17□□□□□ -0.78
CTSD-201ENST00000236671 IGKV2D-24A0A075B6R9 120 aa10.16□□□□□ -0.78
CTSD-201ENST00000236671 F8WDY8 70 aa10.15□□□□□ -0.78
CTSD-201ENST00000236671 DNAH7Q8WXX0 4024 aa10.15□□□□□ -0.78
CTSD-201ENST00000236671 SYCNQ0VAF6 134 aa10.15□□□□□ -0.79
CTSD-201ENST00000236671 TENM2Q9NT68 2774 aa10.14□□□□□ -0.79
CTSD-201ENST00000236671 H7BZZ5 65 aa10.13□□□□□ -0.79
CTSD-201ENST00000236671 SERTAD4-AS1Q5TG53 156 aa10.13□□□□□ -0.79
CTSD-201ENST00000236671 KCNQ1DNQ9H478 68 aa10.13□□□□□ -0.79
CTSD-201ENST00000236671 KLKP1Q107X0 134 aa10.12□□□□□ -0.79
CTSD-201ENST00000236671 DEFB131BA0A096LNP1 70 aa10.11□□□□□ -0.79
CTSD-201ENST00000236671 C7orf33Q8WU49 177 aa10.11□□□□□ -0.79
CTSD-201ENST00000236671 FAM236DA0A1B0GTK5 79 aa10.1□□□□□ -0.79
CTSD-201ENST00000236671 FAM236CP0DP71 79 aa10.1□□□□□ -0.79
CTSD-201ENST00000236671 NKAPP1Q8N9T2 125 aa10.1□□□□□ -0.79
CTSD-201ENST00000236671 STARD9Q9P2P6 4700 aa10.09□□□□□ -0.79
CTSD-201ENST00000236671 B9D2Q9BPU9 175 aa10.09□□□□□ -0.79
CTSD-201ENST00000236671 TM2D3Q9BRN9 247 aa10.09□□□□□ -0.79
CTSD-201ENST00000236671 DNAH1Q9P2D7 4330 aa10.09□□□□□ -0.79
CTSD-201ENST00000236671 DNAH10OSP0CZ25 163 aa10.09□□□□□ -0.79
CTSD-201ENST00000236671 Q8N377 158 aa10.08□□□□□ -0.8
CTSD-201ENST00000236671 C11orf45Q8TAV5 145 aa10.08□□□□□ -0.8
CTSD-201ENST00000236671 SNURFQ9Y675 71 aa10.08□□□□□ -0.8
CTSD-201ENST00000236671 RMI2Q96E14 147 aa10.07□□□□□ -0.8
CTSD-201ENST00000236671 TLX1NBP0CAT3 122 aa10.06□□□□□ -0.8
CTSD-201ENST00000236671 Q8N9L7 120 aa10.06□□□□□ -0.8
CTSD-201ENST00000236671 IGKV4-1P06312 121 aa10.06□□□□□ -0.8
CTSD-201ENST00000236671 DEFB105AQ8NG35 78 aa10.06□□□□□ -0.8
CTSD-201ENST00000236671 PLA2G2DQ9UNK4 145 aa10.06□□□□□ -0.8
CTSD-201ENST00000236671 IGLV5-48A0A075B6I7 105 aa10.05□□□□□ -0.8
CTSD-201ENST00000236671 NREPQ16612 68 aa10.04□□□□□ -0.8
CTSD-201ENST00000236671 KRTAP4-16G5E9R7 235 aaPredicted RBP10.04□□□□□ -0.8
CTSD-201ENST00000236671 C3orf84H3BNL1 204 aa10.04□□□□□ -0.8
CTSD-201ENST00000236671 BPY2O14599 106 aa10.04□□□□□ -0.8
CTSD-201ENST00000236671 Q5XG85 94 aa10.04□□□□□ -0.8
CTSD-201ENST00000236671 EPM2AB3EWF7 344 aa10.03□□□□□ -0.8
CTSD-201ENST00000236671 Q6ZRX8 168 aa10.03□□□□□ -0.8
CTSD-201ENST00000236671 FAM168BA1KXE4 195 aa10.03□□□□□ -0.8
CTSD-201ENST00000236671 Q9BRP9 147 aa10.03□□□□□ -0.8
CTSD-201ENST00000236671 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
CTSD-201ENST00000236671 C5orf47Q569G3 176 aa10.02□□□□□ -0.81
CTSD-201ENST00000236671 DHRS4-AS1Q9P1J3 65 aa10.02□□□□□ -0.81
CTSD-201ENST00000236671 RPL37AP8A6NKH3 93 aa10.01□□□□□ -0.81
CTSD-201ENST00000236671 F8WEM9 126 aa10.01□□□□□ -0.81
CTSD-201ENST00000236671 CASC10Q5T4H9 136 aa10.01□□□□□ -0.81
CTSD-201ENST00000236671 IGLV1-50A0A075B6I6 118 aa10.01□□□□□ -0.81
CTSD-201ENST00000236671 PRYO14603 147 aa10.01□□□□□ -0.81
CTSD-201ENST00000236671 SERP1Q9Y6X1 66 aa10.01□□□□□ -0.81
CTSD-201ENST00000236671 PLECQ15149 4684 aaKnown RBP10□□□□□ -0.81
CTSD-201ENST00000236671 SPRR1AP35321 89 aa10□□□□□ -0.81
CTSD-201ENST00000236671 KRTAP7-1Q8IUC3 87 aa10□□□□□ -0.81
CTSD-201ENST00000236671 LINC00588Q9Y4M8 146 aa10□□□□□ -0.81
CTSD-201ENST00000236671 C4orf26Q17RF5 130 aa9.99□□□□□ -0.81
CTSD-201ENST00000236671 TNP2Q05952 138 aa9.98□□□□□ -0.81
CTSD-201ENST00000236671 NDUFC1O43677 76 aa9.98□□□□□ -0.81
CTSD-201ENST00000236671 ERC2-IT1O76042 136 aa9.98□□□□□ -0.81
CTSD-201ENST00000236671 OCR1Q9BZK8 76 aa9.98□□□□□ -0.81
CTSD-201ENST00000236671 A0A1W2PNM2 257 aa9.97□□□□□ -0.81
CTSD-201ENST00000236671 ST20-AS1Q8NBB2 130 aa9.97□□□□□ -0.81
CTSD-201ENST00000236671 TMEM254Q8TBM7 123 aa9.97□□□□□ -0.81
CTSD-201ENST00000236671 ETDCA0A1B0GVM5 59 aa9.97□□□□□ -0.81
CTSD-201ENST00000236671 FUSP35637 526 aaKnown RBP eCLIP9.96□□□□□ -0.82
CTSD-201ENST00000236671 A0A1B0GW54 56 aa9.95□□□□□ -0.82
CTSD-201ENST00000236671 C1orf137Q5JT78 98 aa9.94□□□□□ -0.82
CTSD-201ENST00000236671 MRPL55Q7Z7F7 128 aaKnown RBP9.93□□□□□ -0.82
CTSD-201ENST00000236671 Q8NBF4 154 aa9.93□□□□□ -0.82
CTSD-201ENST00000236671 HRCT1Q6UXD1 115 aa9.92□□□□□ -0.82
CTSD-201ENST00000236671 DYNC2H1Q8NCM8 4307 aaKnown RBP9.91□□□□□ -0.82
CTSD-201ENST00000236671 A0A0U1RQV1 116 aa9.91□□□□□ -0.82
CTSD-201ENST00000236671 ATP5EP56381 51 aaPredicted RBP9.91□□□□□ -0.82
CTSD-201ENST00000236671 KMT2CQ8NEZ4 4911 aaKnown RBP9.91□□□□□ -0.82
CTSD-201ENST00000236671 SPRR4Q96PI1 79 aa9.9□□□□□ -0.82
CTSD-201ENST00000236671 UBE2BP63146 152 aa9.88□□□□□ -0.83
CTSD-201ENST00000236671 SMIM29Q86T20 159 aa9.87□□□□□ -0.83
CTSD-201ENST00000236671 KMT2AQ03164 3969 aa9.87□□□□□ -0.83
CTSD-201ENST00000236671 REG3GQ6UW15 175 aa9.86□□□□□ -0.83
CTSD-201ENST00000236671 DNAH10Q8IVF4 4471 aa9.85□□□□□ -0.83
CTSD-201ENST00000236671 SMIM26A0A096LP01 95 aa9.85□□□□□ -0.83
CTSD-201ENST00000236671 DSCR10P59022 87 aa9.85□□□□□ -0.83
CTSD-201ENST00000236671 FP248Q71RG6 208 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms