RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 A0A1B0GV72 72 aa11.55□□□□□ -0.56
CBX1-201ENST00000225603 FAT2Q9NYQ8 4349 aa11.54□□□□□ -0.56
CBX1-201ENST00000225603 A0A096LNI7 61 aa11.54□□□□□ -0.56
CBX1-201ENST00000225603 GAGE2AQ6NT46 116 aa11.54□□□□□ -0.56
CBX1-201ENST00000225603 C14orf132Q9NPU4 83 aa11.54□□□□□ -0.56
CBX1-201ENST00000225603 HECTD4Q9Y4D8 3996 aa11.54□□□□□ -0.56
CBX1-201ENST00000225603 LINC00575Q6W349 94 aa11.53□□□□□ -0.56
CBX1-201ENST00000225603 SMCR5Q8TEV8 140 aa11.53□□□□□ -0.56
CBX1-201ENST00000225603 FAM168BA1KXE4 195 aa11.52□□□□□ -0.56
CBX1-201ENST00000225603 SDIM1Q6ZPB5 146 aa11.52□□□□□ -0.56
CBX1-201ENST00000225603 DNAH11Q96DT5 4516 aa11.52□□□□□ -0.56
CBX1-201ENST00000225603 IGKV2-24A0A0C4DH68 120 aa11.52□□□□□ -0.57
CBX1-201ENST00000225603 TRBV10-3A0A0K0K1G6 114 aa11.51□□□□□ -0.57
CBX1-201ENST00000225603 VPREB1P12018 145 aa11.51□□□□□ -0.57
CBX1-201ENST00000225603 SERTAD4-AS1Q5TG53 156 aa11.51□□□□□ -0.57
CBX1-201ENST00000225603 RYR2Q92736 4967 aa11.51□□□□□ -0.57
CBX1-201ENST00000225603 C16orf90A8MZG2 172 aa11.51□□□□□ -0.57
CBX1-201ENST00000225603 CHTF8P0CG12 524 aa11.51□□□□□ -0.57
CBX1-201ENST00000225603 KRTAP10-2P60368 255 aa11.51□□□□□ -0.57
CBX1-201ENST00000225603 KRTAP7-1Q8IUC3 87 aa11.51□□□□□ -0.57
CBX1-201ENST00000225603 TRAV23DV6A0A075B6W5 121 aa11.5□□□□□ -0.57
CBX1-201ENST00000225603 TMEM256-PLSCR3K7ERE1 68 aa11.5□□□□□ -0.57
CBX1-201ENST00000225603 IGLV5-52A0A0A0MRZ9 124 aa11.49□□□□□ -0.57
CBX1-201ENST00000225603 TRBV7-7A0A0K0K1E9 115 aa11.49□□□□□ -0.57
CBX1-201ENST00000225603 LINC00643Q86TS7 51 aa11.48□□□□□ -0.57
CBX1-201ENST00000225603 hADV29S1A0JD25 119 aa11.48□□□□□ -0.57
CBX1-201ENST00000225603 PANO1I0J062 215 aa11.48□□□□□ -0.57
CBX1-201ENST00000225603 DIRC1Q969H9 104 aa11.47□□□□□ -0.57
CBX1-201ENST00000225603 JMJD7-PLA2G4BH0Y9G9 81 aa11.45□□□□□ -0.58
CBX1-201ENST00000225603 NDUFV3P56181 108 aaKnown RBP11.45□□□□□ -0.58
CBX1-201ENST00000225603 PLA2G2DQ9UNK4 145 aa11.45□□□□□ -0.58
CBX1-201ENST00000225603 A0A1W2PNN7 141 aa11.45□□□□□ -0.58
CBX1-201ENST00000225603 M0R378 163 aa11.45□□□□□ -0.58
CBX1-201ENST00000225603 FAM19A5Q7Z5A7 132 aaPredicted RBP11.45□□□□□ -0.58
CBX1-201ENST00000225603 ANAPC13Q9BS18 74 aa11.45□□□□□ -0.58
CBX1-201ENST00000225603 ZNF73O43830 326 aaPredicted RBP11.44□□□□□ -0.58
CBX1-201ENST00000225603 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.44□□□□□ -0.58
CBX1-201ENST00000225603 PKD1P98161 4303 aa11.44□□□□□ -0.58
CBX1-201ENST00000225603 DNAH5Q8TE73 4624 aa11.43□□□□□ -0.58
CBX1-201ENST00000225603 IMUPQ9GZP8 106 aa11.43□□□□□ -0.58
CBX1-201ENST00000225603 CCKP06307 115 aa11.41□□□□□ -0.58
CBX1-201ENST00000225603 IGLV5-37A0A075B6J1 123 aa11.41□□□□□ -0.58
CBX1-201ENST00000225603 COX7BP24311 80 aa11.41□□□□□ -0.58
CBX1-201ENST00000225603 NKAPP1Q8N9T2 125 aa11.41□□□□□ -0.58
CBX1-201ENST00000225603 C7orf33Q8WU49 177 aa11.41□□□□□ -0.58
CBX1-201ENST00000225603 TRBV7-6A0A0J9YX20 115 aa11.4□□□□□ -0.58
CBX1-201ENST00000225603 LINC00846Q9NV44 126 aa11.4□□□□□ -0.58
CBX1-201ENST00000225603 PKIGQ9Y2B9 76 aa11.4□□□□□ -0.58
CBX1-201ENST00000225603 ELOF1P60002 83 aaKnown RBP11.4□□□□□ -0.58
CBX1-201ENST00000225603 Q6ZQY7 126 aa11.39□□□□□ -0.59
CBX1-201ENST00000225603 LINC00336Q6ZUF6 198 aa11.39□□□□□ -0.59
CBX1-201ENST00000225603 SPACA4Q8TDM5 124 aa11.39□□□□□ -0.59
CBX1-201ENST00000225603 LINC00474Q9P2X8 69 aa11.37□□□□□ -0.59
CBX1-201ENST00000225603 DPH3Q96FX2 82 aa11.37□□□□□ -0.59
CBX1-201ENST00000225603 H3BQ85 93 aa11.36□□□□□ -0.59
CBX1-201ENST00000225603 RPL37AP8A6NKH3 93 aa11.36□□□□□ -0.59
CBX1-201ENST00000225603 MRPL55Q7Z7F7 128 aaKnown RBP11.36□□□□□ -0.59
CBX1-201ENST00000225603 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.35□□□□□ -0.59
CBX1-201ENST00000225603 KRTAP10-1P60331 282 aa11.35□□□□□ -0.59
CBX1-201ENST00000225603 LAMTOR3Q9UHA4 124 aa11.35□□□□□ -0.59
CBX1-201ENST00000225603 A0A1B0GVY2 172 aa11.34□□□□□ -0.59
CBX1-201ENST00000225603 RYR3Q15413 4870 aa11.33□□□□□ -0.59
CBX1-201ENST00000225603 RBM3P98179 157 aaKnown RBP11.33□□□□□ -0.59
CBX1-201ENST00000225603 PHF5AQ7RTV0 110 aaKnown RBP11.33□□□□□ -0.59
CBX1-201ENST00000225603 FAM30AQ9NZY2 134 aa11.33□□□□□ -0.59
CBX1-201ENST00000225603 Q6JHZ5 121 aa11.33□□□□□ -0.6
CBX1-201ENST00000225603 FAM236AA0A1B0GUQ0 79 aa11.32□□□□□ -0.6
CBX1-201ENST00000225603 FAM236BA0A1B0GV22 79 aa11.32□□□□□ -0.6
CBX1-201ENST00000225603 LINC00528Q8N1L1 170 aa11.32□□□□□ -0.6
CBX1-201ENST00000225603 IGLV1-50A0A075B6I6 118 aa11.32□□□□□ -0.6
CBX1-201ENST00000225603 LOC110117498A0A087WWA1 95 aa11.31□□□□□ -0.6
CBX1-201ENST00000225603 Q6ZQT0 140 aa11.31□□□□□ -0.6
CBX1-201ENST00000225603 EPM2AB3EWF7 344 aa11.31□□□□□ -0.6
CBX1-201ENST00000225603 KRTAP11-1Q8IUC1 163 aa11.31□□□□□ -0.6
CBX1-201ENST00000225603 KCNQ1DNQ9H478 68 aa11.3□□□□□ -0.6
CBX1-201ENST00000225603 GHRHP01286 108 aa11.29□□□□□ -0.6
CBX1-201ENST00000225603 DNAH8Q96JB1 4490 aa11.29□□□□□ -0.6
CBX1-201ENST00000225603 IGKV3D-7A0A0C4DH55 119 aa11.28□□□□□ -0.6
CBX1-201ENST00000225603 PLAC8Q9NZF1 115 aa11.28□□□□□ -0.6
CBX1-201ENST00000225603 PKHD1P08F94 4074 aa11.27□□□□□ -0.6
CBX1-201ENST00000225603 DSCR8Q96T75 97 aa11.27□□□□□ -0.61
CBX1-201ENST00000225603 Q6ZSA8 131 aa11.26□□□□□ -0.61
CBX1-201ENST00000225603 CCDC179H3BU77 68 aa11.24□□□□□ -0.61
CBX1-201ENST00000225603 PDE6GP18545 87 aa11.24□□□□□ -0.61
CBX1-201ENST00000225603 HAMPP81172 84 aa11.24□□□□□ -0.61
CBX1-201ENST00000225603 PRYO14603 147 aa11.24□□□□□ -0.61
CBX1-201ENST00000225603 UBE2BP63146 152 aa11.23□□□□□ -0.61
CBX1-201ENST00000225603 CIRBP-AS1Q8TBR5 109 aa11.23□□□□□ -0.61
CBX1-201ENST00000225603 KRTAP4-16G5E9R7 235 aaPredicted RBP11.23□□□□□ -0.61
CBX1-201ENST00000225603 SPRR1AP35321 89 aa11.23□□□□□ -0.61
CBX1-201ENST00000225603 UBL5Q9BZL1 73 aa11.23□□□□□ -0.61
CBX1-201ENST00000225603 LRP1BQ9NZR2 4599 aa11.22□□□□□ -0.61
CBX1-201ENST00000225603 HIST1H4AP62805 103 aaKnown RBP11.21□□□□□ -0.61
CBX1-201ENST00000225603 ATP5EP2Q5VTU8 51 aa11.21□□□□□ -0.61
CBX1-201ENST00000225603 TRBV7-4A0A0J9YYF1 115 aa11.21□□□□□ -0.62
CBX1-201ENST00000225603 REG3GQ6UW15 175 aa11.21□□□□□ -0.62
CBX1-201ENST00000225603 SCXQ7RTU7 201 aa11.21□□□□□ -0.62
CBX1-201ENST00000225603 DYNC1H1Q14204 4646 aaKnown RBP11.2□□□□□ -0.62
CBX1-201ENST00000225603 B5MCH6 92 aa11.17□□□□□ -0.62
CBX1-201ENST00000225603 Q6ZRX8 168 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms