RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 SPRR1AP35321 89 aa11.32□□□□□ -0.6
GCDH-201ENST00000222214 KRTAP21-3Q3LHN1 58 aa11.32□□□□□ -0.6
GCDH-201ENST00000222214 IMUPQ9GZP8 106 aa11.32□□□□□ -0.6
GCDH-201ENST00000222214 LOC110117498A0A087WWA1 95 aa11.32□□□□□ -0.6
GCDH-201ENST00000222214 TRBV7-7A0A0K0K1E9 115 aa11.32□□□□□ -0.6
GCDH-201ENST00000222214 SMCR5Q8TEV8 140 aa11.32□□□□□ -0.6
GCDH-201ENST00000222214 FAM19A5Q7Z5A7 132 aaPredicted RBP11.31□□□□□ -0.6
GCDH-201ENST00000222214 KRTAP7-1Q8IUC3 87 aa11.31□□□□□ -0.6
GCDH-201ENST00000222214 DHRS4-AS1Q9P1J3 65 aa11.31□□□□□ -0.6
GCDH-201ENST00000222214 A0A1B0GV72 72 aa11.3□□□□□ -0.6
GCDH-201ENST00000222214 LRCOL1A6NCL2 159 aa11.29□□□□□ -0.6
GCDH-201ENST00000222214 KRTAP4-16G5E9R7 235 aaPredicted RBP11.29□□□□□ -0.6
GCDH-201ENST00000222214 Q6ZRX8 168 aa11.29□□□□□ -0.6
GCDH-201ENST00000222214 DSCR8Q96T75 97 aa11.29□□□□□ -0.6
GCDH-201ENST00000222214 A0A096LNI7 61 aa11.28□□□□□ -0.6
GCDH-201ENST00000222214 ETDCA0A1B0GVM5 59 aa11.28□□□□□ -0.6
GCDH-201ENST00000222214 RPL37AP8A6NKH3 93 aa11.28□□□□□ -0.6
GCDH-201ENST00000222214 Q6ZRN7 208 aaPredicted RBP11.28□□□□□ -0.6
GCDH-201ENST00000222214 Q6ZQT0 140 aa11.27□□□□□ -0.61
GCDH-201ENST00000222214 LINC00846Q9NV44 126 aa11.27□□□□□ -0.61
GCDH-201ENST00000222214 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.27□□□□□ -0.61
GCDH-201ENST00000222214 B5MCH6 92 aa11.27□□□□□ -0.61
GCDH-201ENST00000222214 C9orf163Q8N9P6 203 aa11.26□□□□□ -0.61
GCDH-201ENST00000222214 NDUFV3P56181 108 aaKnown RBP11.25□□□□□ -0.61
GCDH-201ENST00000222214 CSMD3Q7Z407 3707 aa11.25□□□□□ -0.61
GCDH-201ENST00000222214 IGKV2-24A0A0C4DH68 120 aa11.23□□□□□ -0.61
GCDH-201ENST00000222214 REG3GQ6UW15 175 aa11.23□□□□□ -0.61
GCDH-201ENST00000222214 LINC00474Q9P2X8 69 aa11.23□□□□□ -0.61
GCDH-201ENST00000222214 Q6JHZ5 121 aa11.23□□□□□ -0.61
GCDH-201ENST00000222214 LYSTQ99698 3801 aa11.23□□□□□ -0.61
GCDH-201ENST00000222214 PRKDCP78527 4128 aaKnown RBP11.22□□□□□ -0.61
GCDH-201ENST00000222214 TRBV7-4A0A0J9YYF1 115 aa11.21□□□□□ -0.61
GCDH-201ENST00000222214 A0A1W2PNN7 141 aa11.19□□□□□ -0.62
GCDH-201ENST00000222214 Q9BRP9 147 aa11.19□□□□□ -0.62
GCDH-201ENST00000222214 UBL5Q9BZL1 73 aa11.19□□□□□ -0.62
GCDH-201ENST00000222214 DNAH7Q8WXX0 4024 aa11.19□□□□□ -0.62
GCDH-201ENST00000222214 ATP5EP2Q5VTU8 51 aa11.19□□□□□ -0.62
GCDH-201ENST00000222214 M0R2N4 97 aa11.17□□□□□ -0.62
GCDH-201ENST00000222214 PLECQ15149 4684 aaKnown RBP11.17□□□□□ -0.62
GCDH-201ENST00000222214 Q6ZR54 194 aa11.17□□□□□ -0.62
GCDH-201ENST00000222214 MEGF8Q7Z7M0 2845 aa11.17□□□□□ -0.62
GCDH-201ENST00000222214 Q8N377 158 aa11.16□□□□□ -0.62
GCDH-201ENST00000222214 ANAPC13Q9BS18 74 aa11.16□□□□□ -0.62
GCDH-201ENST00000222214 IGLV5-48A0A075B6I7 105 aa11.16□□□□□ -0.62
GCDH-201ENST00000222214 UBE2BP63146 152 aa11.16□□□□□ -0.62
GCDH-201ENST00000222214 LINC01547P58512 204 aaPredicted RBP11.15□□□□□ -0.62
GCDH-201ENST00000222214 A0A087WTM6 91 aa11.14□□□□□ -0.63
GCDH-201ENST00000222214 DEFB105AQ8NG35 78 aa11.14□□□□□ -0.63
GCDH-201ENST00000222214 TENM2Q9NT68 2774 aa11.13□□□□□ -0.63
GCDH-201ENST00000222214 DNAH10Q8IVF4 4471 aa11.13□□□□□ -0.63
GCDH-201ENST00000222214 CHTF8P0CG12 524 aa11.12□□□□□ -0.63
GCDH-201ENST00000222214 STARD9Q9P2P6 4700 aa11.1□□□□□ -0.63
GCDH-201ENST00000222214 IGKV3D-7A0A0C4DH55 119 aa11.1□□□□□ -0.63
GCDH-201ENST00000222214 FAM19A1Q7Z5A9 133 aa11.1□□□□□ -0.63
GCDH-201ENST00000222214 VPS13DQ5THJ4 4388 aa11.1□□□□□ -0.63
GCDH-201ENST00000222214 FAM236AA0A1B0GUQ0 79 aa11.09□□□□□ -0.63
GCDH-201ENST00000222214 FAM236BA0A1B0GV22 79 aa11.09□□□□□ -0.63
GCDH-201ENST00000222214 H0Y9J4 135 aa11.09□□□□□ -0.63
GCDH-201ENST00000222214 PHF5AQ7RTV0 110 aaKnown RBP11.08□□□□□ -0.64
GCDH-201ENST00000222214 A0A1B0GW54 56 aa11.08□□□□□ -0.64
GCDH-201ENST00000222214 ERC2-IT1O76042 136 aa11.07□□□□□ -0.64
GCDH-201ENST00000222214 C1orf134Q5TEV5 83 aa11.07□□□□□ -0.64
GCDH-201ENST00000222214 ST20-AS1Q8NBB2 130 aa11.07□□□□□ -0.64
GCDH-201ENST00000222214 Q6ZVQ6 151 aa11.07□□□□□ -0.64
GCDH-201ENST00000222214 WWC2-AS2Q96NR7 200 aa11.07□□□□□ -0.64
GCDH-201ENST00000222214 EPM2AB3EWF7 344 aa11.06□□□□□ -0.64
GCDH-201ENST00000222214 TNP2Q05952 138 aa11.06□□□□□ -0.64
GCDH-201ENST00000222214 SPACA4Q8TDM5 124 aa11.06□□□□□ -0.64
GCDH-201ENST00000222214 PRLHP81277 87 aa11.04□□□□□ -0.64
GCDH-201ENST00000222214 DPH3Q96FX2 82 aa11.04□□□□□ -0.64
GCDH-201ENST00000222214 RTL8CO15255 209 aa11.03□□□□□ -0.64
GCDH-201ENST00000222214 HIST1H4AP62805 103 aaKnown RBP11.03□□□□□ -0.64
GCDH-201ENST00000222214 LY6G6CO95867 125 aa11.03□□□□□ -0.64
GCDH-201ENST00000222214 CXCL6P80162 114 aa11.03□□□□□ -0.64
GCDH-201ENST00000222214 FUSP35637 526 aaKnown RBP eCLIP11.02□□□□□ -0.65
GCDH-201ENST00000222214 C3orf22Q8N5N4 141 aa11.01□□□□□ -0.65
GCDH-201ENST00000222214 HIGD2AQ9BW72 106 aa11.01□□□□□ -0.65
GCDH-201ENST00000222214 F8WEM9 126 aa11.01□□□□□ -0.65
GCDH-201ENST00000222214 C1orf137Q5JT78 98 aa11.01□□□□□ -0.65
GCDH-201ENST00000222214 PANO1I0J062 215 aa11□□□□□ -0.65
GCDH-201ENST00000222214 ATOX1O00244 68 aa11□□□□□ -0.65
GCDH-201ENST00000222214 LINC00476Q8WZB0 136 aa11□□□□□ -0.65
GCDH-201ENST00000222214 HAMPP81172 84 aa10.99□□□□□ -0.65
GCDH-201ENST00000222214 KRTAP11-1Q8IUC1 163 aa10.99□□□□□ -0.65
GCDH-201ENST00000222214 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.99□□□□□ -0.65
GCDH-201ENST00000222214 BCE1O60756 84 aa10.99□□□□□ -0.65
GCDH-201ENST00000222214 UBE2AP49459 152 aa10.99□□□□□ -0.65
GCDH-201ENST00000222214 SMIM29Q86T20 159 aa10.98□□□□□ -0.65
GCDH-201ENST00000222214 FBN3Q75N90 2809 aa10.97□□□□□ -0.65
GCDH-201ENST00000222214 IGLV5-52A0A0A0MRZ9 124 aa10.96□□□□□ -0.65
GCDH-201ENST00000222214 Q8NBF4 154 aa10.96□□□□□ -0.65
GCDH-201ENST00000222214 A0A087WVE0 104 aa10.95□□□□□ -0.66
GCDH-201ENST00000222214 C3orf84H3BNL1 204 aa10.95□□□□□ -0.66
GCDH-201ENST00000222214 SPRR1BP22528 89 aa10.95□□□□□ -0.66
GCDH-201ENST00000222214 NREPQ16612 68 aa10.95□□□□□ -0.66
GCDH-201ENST00000222214 IGLV8-61A0A075B6I0 122 aa10.94□□□□□ -0.66
GCDH-201ENST00000222214 SPRR4Q96PI1 79 aa10.94□□□□□ -0.66
GCDH-201ENST00000222214 A0A1W2PNM2 257 aa10.94□□□□□ -0.66
GCDH-201ENST00000222214 PLAC8Q9NZF1 115 aa10.93□□□□□ -0.66
GCDH-201ENST00000222214 KRTAP13-1Q8IUC0 172 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms