RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 A0A096LNI7 61 aa11.03□□□□□ -0.64
RABGGTA-201ENST00000216840 M0R2N4 97 aa11.03□□□□□ -0.64
RABGGTA-201ENST00000216840 A0A1B0GV72 72 aa11.02□□□□□ -0.64
RABGGTA-201ENST00000216840 RPL37AP8A6NKH3 93 aa11.02□□□□□ -0.64
RABGGTA-201ENST00000216840 C16orf90A8MZG2 172 aa11.02□□□□□ -0.64
RABGGTA-201ENST00000216840 GAGE2AQ6NT46 116 aa11.02□□□□□ -0.65
RABGGTA-201ENST00000216840 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.02□□□□□ -0.65
RABGGTA-201ENST00000216840 JMJD7-PLA2G4BH0Y9G9 81 aa11.01□□□□□ -0.65
RABGGTA-201ENST00000216840 MRPL55Q7Z7F7 128 aaKnown RBP11.01□□□□□ -0.65
RABGGTA-201ENST00000216840 PRYO14603 147 aa11□□□□□ -0.65
RABGGTA-201ENST00000216840 IGKV2-24A0A0C4DH68 120 aa10.99□□□□□ -0.65
RABGGTA-201ENST00000216840 H3BQ85 93 aa10.99□□□□□ -0.65
RABGGTA-201ENST00000216840 FBN3Q75N90 2809 aa10.98□□□□□ -0.65
RABGGTA-201ENST00000216840 KRTAP4-16G5E9R7 235 aaPredicted RBP10.98□□□□□ -0.65
RABGGTA-201ENST00000216840 SPRR1AP35321 89 aa10.98□□□□□ -0.65
RABGGTA-201ENST00000216840 C9orf163Q8N9P6 203 aa10.97□□□□□ -0.65
RABGGTA-201ENST00000216840 A0A1W2PNN7 141 aa10.96□□□□□ -0.65
RABGGTA-201ENST00000216840 SCGB1A1P11684 91 aa10.96□□□□□ -0.65
RABGGTA-201ENST00000216840 Q6ZR54 194 aa10.96□□□□□ -0.65
RABGGTA-201ENST00000216840 B5MCH6 92 aa10.95□□□□□ -0.66
RABGGTA-201ENST00000216840 SDIM1Q6ZPB5 146 aa10.95□□□□□ -0.66
RABGGTA-201ENST00000216840 SMCR5Q8TEV8 140 aa10.95□□□□□ -0.66
RABGGTA-201ENST00000216840 LAMTOR3Q9UHA4 124 aa10.95□□□□□ -0.66
RABGGTA-201ENST00000216840 GHRHP01286 108 aa10.94□□□□□ -0.66
RABGGTA-201ENST00000216840 CCKP06307 115 aa10.94□□□□□ -0.66
RABGGTA-201ENST00000216840 Q6ZRX8 168 aa10.94□□□□□ -0.66
RABGGTA-201ENST00000216840 CHTF8P0CG12 524 aa10.93□□□□□ -0.66
RABGGTA-201ENST00000216840 ETDCA0A1B0GVM5 59 aa10.93□□□□□ -0.66
RABGGTA-201ENST00000216840 RBM3P98179 157 aaKnown RBP10.93□□□□□ -0.66
RABGGTA-201ENST00000216840 Q9BRP9 147 aa10.91□□□□□ -0.66
RABGGTA-201ENST00000216840 A0A087WTM6 91 aa10.91□□□□□ -0.66
RABGGTA-201ENST00000216840 REG3GQ6UW15 175 aa10.91□□□□□ -0.66
RABGGTA-201ENST00000216840 DHRS4-AS1Q9P1J3 65 aa10.91□□□□□ -0.66
RABGGTA-201ENST00000216840 PKIGQ9Y2B9 76 aa10.91□□□□□ -0.66
RABGGTA-201ENST00000216840 KMT2AQ03164 3969 aa10.9□□□□□ -0.66
RABGGTA-201ENST00000216840 LOC110117498A0A087WWA1 95 aa10.89□□□□□ -0.67
RABGGTA-201ENST00000216840 LINC00643Q86TS7 51 aa10.89□□□□□ -0.67
RABGGTA-201ENST00000216840 Q6ZQT0 140 aa10.88□□□□□ -0.67
RABGGTA-201ENST00000216840 LINC00846Q9NV44 126 aa10.88□□□□□ -0.67
RABGGTA-201ENST00000216840 NDUFV3P56181 108 aaKnown RBP10.88□□□□□ -0.67
RABGGTA-201ENST00000216840 WWC2-AS2Q96NR7 200 aa10.87□□□□□ -0.67
RABGGTA-201ENST00000216840 LY6G6CO95867 125 aa10.85□□□□□ -0.67
RABGGTA-201ENST00000216840 LINC01547P58512 204 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-201ENST00000216840 PHF5AQ7RTV0 110 aaKnown RBP10.85□□□□□ -0.67
RABGGTA-201ENST00000216840 DSCR8Q96T75 97 aa10.85□□□□□ -0.67
RABGGTA-201ENST00000216840 LINC00474Q9P2X8 69 aa10.85□□□□□ -0.67
RABGGTA-201ENST00000216840 DNAH2Q9P225 4427 aa10.85□□□□□ -0.67
RABGGTA-201ENST00000216840 TGP01266 2768 aa10.85□□□□□ -0.67
RABGGTA-201ENST00000216840 PANO1I0J062 215 aa10.85□□□□□ -0.67
RABGGTA-201ENST00000216840 Q6Q795 121 aa10.85□□□□□ -0.67
RABGGTA-201ENST00000216840 Q8N377 158 aa10.85□□□□□ -0.67
RABGGTA-201ENST00000216840 DNAH6Q9C0G6 4158 aa10.84□□□□□ -0.67
RABGGTA-201ENST00000216840 DEFB105AQ8NG35 78 aa10.84□□□□□ -0.67
RABGGTA-201ENST00000216840 TRBV7-7A0A0K0K1E9 115 aa10.83□□□□□ -0.68
RABGGTA-201ENST00000216840 TRBV7-4A0A0J9YYF1 115 aa10.83□□□□□ -0.68
RABGGTA-201ENST00000216840 ERC2-IT1O76042 136 aa10.83□□□□□ -0.68
RABGGTA-201ENST00000216840 PDE6GP18545 87 aa10.83□□□□□ -0.68
RABGGTA-201ENST00000216840 UBE2BP63146 152 aa10.83□□□□□ -0.68
RABGGTA-201ENST00000216840 C1orf134Q5TEV5 83 aa10.83□□□□□ -0.68
RABGGTA-201ENST00000216840 KRTAP11-1Q8IUC1 163 aa10.83□□□□□ -0.68
RABGGTA-201ENST00000216840 LINC00476Q8WZB0 136 aa10.82□□□□□ -0.68
RABGGTA-201ENST00000216840 HECTD4Q9Y4D8 3996 aa10.82□□□□□ -0.68
RABGGTA-201ENST00000216840 ST20-AS1Q8NBB2 130 aa10.81□□□□□ -0.68
RABGGTA-201ENST00000216840 FUSP35637 526 aaKnown RBP eCLIP10.81□□□□□ -0.68
RABGGTA-201ENST00000216840 DNAH17Q9UFH2 4485 aa10.8□□□□□ -0.68
RABGGTA-201ENST00000216840 IGLV5-48A0A075B6I7 105 aa10.8□□□□□ -0.68
RABGGTA-201ENST00000216840 FAM19A1Q7Z5A9 133 aa10.8□□□□□ -0.68
RABGGTA-201ENST00000216840 SPACA4Q8TDM5 124 aa10.8□□□□□ -0.68
RABGGTA-201ENST00000216840 RTL8CO15255 209 aa10.79□□□□□ -0.68
RABGGTA-201ENST00000216840 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.79□□□□□ -0.68
RABGGTA-201ENST00000216840 PRLHP81277 87 aa10.78□□□□□ -0.68
RABGGTA-201ENST00000216840 IMUPQ9GZP8 106 aa10.78□□□□□ -0.68
RABGGTA-201ENST00000216840 ALMS1Q8TCU4 4167 aa10.78□□□□□ -0.68
RABGGTA-201ENST00000216840 Q6JHZ5 121 aa10.77□□□□□ -0.69
RABGGTA-201ENST00000216840 DPH3Q96FX2 82 aa10.77□□□□□ -0.69
RABGGTA-201ENST00000216840 EPM2AB3EWF7 344 aa10.76□□□□□ -0.69
RABGGTA-201ENST00000216840 C3orf22Q8N5N4 141 aa10.75□□□□□ -0.69
RABGGTA-201ENST00000216840 IGKV3D-7A0A0C4DH55 119 aa10.73□□□□□ -0.69
RABGGTA-201ENST00000216840 C3orf84H3BNL1 204 aa10.73□□□□□ -0.69
RABGGTA-201ENST00000216840 UBL5Q9BZL1 73 aa10.73□□□□□ -0.69
RABGGTA-201ENST00000216840 IGLV5-52A0A0A0MRZ9 124 aa10.72□□□□□ -0.69
RABGGTA-201ENST00000216840 H0Y9J4 135 aa10.72□□□□□ -0.69
RABGGTA-201ENST00000216840 TNP2Q05952 138 aa10.72□□□□□ -0.69
RABGGTA-201ENST00000216840 HIGD2AQ9BW72 106 aa10.72□□□□□ -0.69
RABGGTA-201ENST00000216840 SMIM29Q86T20 159 aa10.69□□□□□ -0.7
RABGGTA-201ENST00000216840 BCE1O60756 84 aa10.67□□□□□ -0.7
RABGGTA-201ENST00000216840 ATP5EP2Q5VTU8 51 aa10.67□□□□□ -0.7
RABGGTA-201ENST00000216840 Q6ZVQ6 151 aa10.67□□□□□ -0.7
RABGGTA-201ENST00000216840 FRAS1Q86XX4 4008 aa10.67□□□□□ -0.7
RABGGTA-201ENST00000216840 UBE2AP49459 152 aa10.67□□□□□ -0.7
RABGGTA-201ENST00000216840 PLAC8Q9NZF1 115 aa10.66□□□□□ -0.7
RABGGTA-201ENST00000216840 ANAPC13Q9BS18 74 aa10.65□□□□□ -0.7
RABGGTA-201ENST00000216840 FAM236AA0A1B0GUQ0 79 aa10.65□□□□□ -0.7
RABGGTA-201ENST00000216840 FAM236BA0A1B0GV22 79 aa10.65□□□□□ -0.7
RABGGTA-201ENST00000216840 C1orf137Q5JT78 98 aa10.65□□□□□ -0.7
RABGGTA-201ENST00000216840 KRTAP13-1Q8IUC0 172 aa10.65□□□□□ -0.7
RABGGTA-201ENST00000216840 A0A1W2PNM2 257 aa10.62□□□□□ -0.71
RABGGTA-201ENST00000216840 F8WEM9 126 aa10.61□□□□□ -0.71
RABGGTA-201ENST00000216840 SPRR1BP22528 89 aa10.61□□□□□ -0.71
RABGGTA-201ENST00000216840 KRTAP10-2P60368 255 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms