RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 CCKP06307 115 aa19.08■□□□□ 0.64
PABPN1-201ENST00000216727 Q6Q795 121 aa19.08■□□□□ 0.64
PABPN1-201ENST00000216727 LINC00643Q86TS7 51 aa19.07■□□□□ 0.64
PABPN1-201ENST00000216727 IGLV1-50A0A075B6I6 118 aa19.07■□□□□ 0.64
PABPN1-201ENST00000216727 PRYO14603 147 aa19.05■□□□□ 0.64
PABPN1-201ENST00000216727 LAMTOR3Q9UHA4 124 aa19.03■□□□□ 0.64
PABPN1-201ENST00000216727 C16orf90A8MZG2 172 aa19.03■□□□□ 0.64
PABPN1-201ENST00000216727 RBM3P98179 157 aaKnown RBP19.03■□□□□ 0.64
PABPN1-201ENST00000216727 MRPL55Q7Z7F7 128 aaKnown RBP19.03■□□□□ 0.64
PABPN1-201ENST00000216727 SPRR1AP35321 89 aa19.01■□□□□ 0.63
PABPN1-201ENST00000216727 FAM19A5Q7Z5A7 132 aaPredicted RBP19.01■□□□□ 0.63
PABPN1-201ENST00000216727 TRBV7-7A0A0K0K1E9 115 aa19.01■□□□□ 0.63
PABPN1-201ENST00000216727 STARD9Q9P2P6 4700 aa19■□□□□ 0.63
PABPN1-201ENST00000216727 RPL37AP8A6NKH3 93 aa19■□□□□ 0.63
PABPN1-201ENST00000216727 KRTAP4-16G5E9R7 235 aaPredicted RBP19■□□□□ 0.63
PABPN1-201ENST00000216727 LRCOL1A6NCL2 159 aa18.99■□□□□ 0.63
PABPN1-201ENST00000216727 A0A096LNI7 61 aa18.98■□□□□ 0.63
PABPN1-201ENST00000216727 Q6ZRN7 208 aaPredicted RBP18.98■□□□□ 0.63
PABPN1-201ENST00000216727 LOC110117498A0A087WWA1 95 aa18.98■□□□□ 0.63
PABPN1-201ENST00000216727 LINC00846Q9NV44 126 aa18.98■□□□□ 0.63
PABPN1-201ENST00000216727 VPS13DQ5THJ4 4388 aa18.96■□□□□ 0.63
PABPN1-201ENST00000216727 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.95■□□□□ 0.62
PABPN1-201ENST00000216727 Q6ZRX8 168 aa18.95■□□□□ 0.62
PABPN1-201ENST00000216727 IMUPQ9GZP8 106 aa18.95■□□□□ 0.62
PABPN1-201ENST00000216727 Q6ZQT0 140 aa18.94■□□□□ 0.62
PABPN1-201ENST00000216727 B5MCH6 92 aa18.93■□□□□ 0.62
PABPN1-201ENST00000216727 DHRS4-AS1Q9P1J3 65 aa18.93■□□□□ 0.62
PABPN1-201ENST00000216727 PDE6GP18545 87 aa18.91■□□□□ 0.62
PABPN1-201ENST00000216727 DSCR8Q96T75 97 aa18.91■□□□□ 0.62
PABPN1-201ENST00000216727 ETDCA0A1B0GVM5 59 aa18.91■□□□□ 0.62
PABPN1-201ENST00000216727 IGKV2-24A0A0C4DH68 120 aa18.9■□□□□ 0.62
PABPN1-201ENST00000216727 KRTAP21-3Q3LHN1 58 aa18.9■□□□□ 0.62
PABPN1-201ENST00000216727 NDUFV3P56181 108 aaKnown RBP18.89■□□□□ 0.61
PABPN1-201ENST00000216727 C9orf163Q8N9P6 203 aa18.89■□□□□ 0.61
PABPN1-201ENST00000216727 PKIGQ9Y2B9 76 aa18.88■□□□□ 0.61
PABPN1-201ENST00000216727 A0A1W2PNN7 141 aa18.86■□□□□ 0.61
PABPN1-201ENST00000216727 Q9BRP9 147 aa18.86■□□□□ 0.61
PABPN1-201ENST00000216727 TRBV7-4A0A0J9YYF1 115 aa18.84■□□□□ 0.61
PABPN1-201ENST00000216727 REG3GQ6UW15 175 aa18.84■□□□□ 0.61
PABPN1-201ENST00000216727 Q6JHZ5 121 aa18.83■□□□□ 0.6
PABPN1-201ENST00000216727 M0R2N4 97 aa18.82■□□□□ 0.6
PABPN1-201ENST00000216727 LINC01547P58512 204 aaPredicted RBP18.78■□□□□ 0.6
PABPN1-201ENST00000216727 Q8N377 158 aa18.78■□□□□ 0.6
PABPN1-201ENST00000216727 Q6ZR54 194 aa18.77■□□□□ 0.6
PABPN1-201ENST00000216727 CHTF8P0CG12 524 aa18.76■□□□□ 0.59
PABPN1-201ENST00000216727 LINC00474Q9P2X8 69 aa18.75■□□□□ 0.59
PABPN1-201ENST00000216727 UBL5Q9BZL1 73 aa18.74■□□□□ 0.59
PABPN1-201ENST00000216727 DEFB105AQ8NG35 78 aa18.74■□□□□ 0.59
PABPN1-201ENST00000216727 ANAPC13Q9BS18 74 aa18.74■□□□□ 0.59
PABPN1-201ENST00000216727 IGLV5-48A0A075B6I7 105 aa18.73■□□□□ 0.59
PABPN1-201ENST00000216727 A0A087WTM6 91 aa18.71■□□□□ 0.59
PABPN1-201ENST00000216727 UBE2BP63146 152 aa18.71■□□□□ 0.59
PABPN1-201ENST00000216727 ATP5EP2Q5VTU8 51 aa18.71■□□□□ 0.59
PABPN1-201ENST00000216727 FBN3Q75N90 2809 aa18.7■□□□□ 0.58
PABPN1-201ENST00000216727 IGKV3D-7A0A0C4DH55 119 aa18.69■□□□□ 0.58
PABPN1-201ENST00000216727 ERC2-IT1O76042 136 aa18.68■□□□□ 0.58
PABPN1-201ENST00000216727 ST20-AS1Q8NBB2 130 aa18.67■□□□□ 0.58
PABPN1-201ENST00000216727 PHF5AQ7RTV0 110 aaKnown RBP18.66■□□□□ 0.58
PABPN1-201ENST00000216727 FAM236AA0A1B0GUQ0 79 aa18.65■□□□□ 0.58
PABPN1-201ENST00000216727 FAM236BA0A1B0GV22 79 aa18.65■□□□□ 0.58
PABPN1-201ENST00000216727 FAM19A1Q7Z5A9 133 aa18.64■□□□□ 0.57
PABPN1-201ENST00000216727 KMT2AQ03164 3969 aa18.6■□□□□ 0.57
PABPN1-201ENST00000216727 TNP2Q05952 138 aa18.6■□□□□ 0.57
PABPN1-201ENST00000216727 PANO1I0J062 215 aa18.59■□□□□ 0.57
PABPN1-201ENST00000216727 Q6ZVQ6 151 aa18.59■□□□□ 0.57
PABPN1-201ENST00000216727 KRTAP11-1Q8IUC1 163 aa18.59■□□□□ 0.57
PABPN1-201ENST00000216727 PRLHP81277 87 aa18.58■□□□□ 0.56
PABPN1-201ENST00000216727 C3orf22Q8N5N4 141 aa18.58■□□□□ 0.56
PABPN1-201ENST00000216727 SPACA4Q8TDM5 124 aa18.57■□□□□ 0.56
PABPN1-201ENST00000216727 H0Y9J4 135 aa18.57■□□□□ 0.56
PABPN1-201ENST00000216727 DNAH2Q9P225 4427 aa18.56■□□□□ 0.56
PABPN1-201ENST00000216727 EPM2AB3EWF7 344 aa18.56■□□□□ 0.56
PABPN1-201ENST00000216727 HIST1H4AP62805 103 aaKnown RBP18.56■□□□□ 0.56
PABPN1-201ENST00000216727 C1orf134Q5TEV5 83 aa18.55■□□□□ 0.56
PABPN1-201ENST00000216727 WWC2-AS2Q96NR7 200 aa18.52■□□□□ 0.56
PABPN1-201ENST00000216727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.52■□□□□ 0.56
PABPN1-201ENST00000216727 RTL8CO15255 209 aa18.52■□□□□ 0.55
PABPN1-201ENST00000216727 LY6G6CO95867 125 aa18.52■□□□□ 0.55
PABPN1-201ENST00000216727 DPH3Q96FX2 82 aa18.5■□□□□ 0.55
PABPN1-201ENST00000216727 SMIM29Q86T20 159 aa18.5■□□□□ 0.55
PABPN1-201ENST00000216727 HIGD2AQ9BW72 106 aa18.5■□□□□ 0.55
PABPN1-201ENST00000216727 HECTD4Q9Y4D8 3996 aa18.49■□□□□ 0.55
PABPN1-201ENST00000216727 A0A087WVE0 104 aa18.48■□□□□ 0.55
PABPN1-201ENST00000216727 A0A1B0GW54 56 aa18.48■□□□□ 0.55
PABPN1-201ENST00000216727 TGP01266 2768 aa18.47■□□□□ 0.55
PABPN1-201ENST00000216727 C1orf137Q5JT78 98 aa18.47■□□□□ 0.55
PABPN1-201ENST00000216727 CXCL6P80162 114 aa18.47■□□□□ 0.55
PABPN1-201ENST00000216727 HAMPP81172 84 aa18.47■□□□□ 0.55
PABPN1-201ENST00000216727 LINC00476Q8WZB0 136 aa18.47■□□□□ 0.55
PABPN1-201ENST00000216727 DNAH17Q9UFH2 4485 aa18.46■□□□□ 0.55
PABPN1-201ENST00000216727 DNAH6Q9C0G6 4158 aa18.45■□□□□ 0.54
PABPN1-201ENST00000216727 BCE1O60756 84 aa18.43■□□□□ 0.54
PABPN1-201ENST00000216727 FUSP35637 526 aaKnown RBP eCLIP18.43■□□□□ 0.544e-15■□□□□ 8.9
PABPN1-201ENST00000216727 ATOX1O00244 68 aa18.42■□□□□ 0.54
PABPN1-201ENST00000216727 A0A1W2PNM2 257 aa18.41■□□□□ 0.54
PABPN1-201ENST00000216727 F8WEM9 126 aa18.4■□□□□ 0.54
PABPN1-201ENST00000216727 UBE2AP49459 152 aa18.4■□□□□ 0.54
PABPN1-201ENST00000216727 Q8NBF4 154 aa18.39■□□□□ 0.53
PABPN1-201ENST00000216727 KRTAP13-1Q8IUC0 172 aa18.38■□□□□ 0.53
PABPN1-201ENST00000216727 IGLV5-52A0A0A0MRZ9 124 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms