RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ORMDL1Q9P0S3 153 aa12.65□□□□□ -0.38
TNFRSF1A-201ENST00000162749 A0A1B0GX51 115 aa12.65□□□□□ -0.38
TNFRSF1A-201ENST00000162749 M0R378 163 aa12.64□□□□□ -0.39
TNFRSF1A-201ENST00000162749 FRAS1Q86XX4 4008 aa12.64□□□□□ -0.39
TNFRSF1A-201ENST00000162749 SDIM1Q6ZPB5 146 aa12.64□□□□□ -0.39
TNFRSF1A-201ENST00000162749 C14orf132Q9NPU4 83 aa12.64□□□□□ -0.39
TNFRSF1A-201ENST00000162749 FAM168BA1KXE4 195 aa12.63□□□□□ -0.39
TNFRSF1A-201ENST00000162749 PLA2G2DQ9UNK4 145 aa12.63□□□□□ -0.39
TNFRSF1A-201ENST00000162749 DNAH17Q9UFH2 4485 aa12.62□□□□□ -0.39
TNFRSF1A-201ENST00000162749 A0A087WTM6 91 aa12.62□□□□□ -0.39
TNFRSF1A-201ENST00000162749 GAGE2AQ6NT46 116 aa12.62□□□□□ -0.39
TNFRSF1A-201ENST00000162749 A0A096LNI7 61 aa12.61□□□□□ -0.39
TNFRSF1A-201ENST00000162749 C1orf134Q5TEV5 83 aa12.61□□□□□ -0.39
TNFRSF1A-201ENST00000162749 KRTAP7-1Q8IUC3 87 aa12.61□□□□□ -0.39
TNFRSF1A-201ENST00000162749 C9orf163Q8N9P6 203 aa12.61□□□□□ -0.39
TNFRSF1A-201ENST00000162749 NKAPP1Q8N9T2 125 aa12.61□□□□□ -0.39
TNFRSF1A-201ENST00000162749 C16orf90A8MZG2 172 aa12.6□□□□□ -0.39
TNFRSF1A-201ENST00000162749 TRAV23DV6A0A075B6W5 121 aa12.6□□□□□ -0.39
TNFRSF1A-201ENST00000162749 TRBV7-7A0A0K0K1E9 115 aa12.6□□□□□ -0.39
TNFRSF1A-201ENST00000162749 LINC00575Q6W349 94 aa12.6□□□□□ -0.39
TNFRSF1A-201ENST00000162749 IGLV5-37A0A075B6J1 123 aa12.58□□□□□ -0.4
TNFRSF1A-201ENST00000162749 IGKV2-24A0A0C4DH68 120 aa12.58□□□□□ -0.4
TNFRSF1A-201ENST00000162749 C7orf33Q8WU49 177 aa12.57□□□□□ -0.4
TNFRSF1A-201ENST00000162749 LINC00643Q86TS7 51 aa12.56□□□□□ -0.4
TNFRSF1A-201ENST00000162749 ZNF73O43830 326 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-201ENST00000162749 FAM19A5Q7Z5A7 132 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF1A-201ENST00000162749 TMEM256-PLSCR3K7ERE1 68 aa12.55□□□□□ -0.4
TNFRSF1A-201ENST00000162749 SACSQ9NZJ4 4579 aa12.53□□□□□ -0.4
TNFRSF1A-201ENST00000162749 DIRC1Q969H9 104 aa12.53□□□□□ -0.4
TNFRSF1A-201ENST00000162749 hADV29S1A0JD25 119 aa12.53□□□□□ -0.4
TNFRSF1A-201ENST00000162749 FAM236AA0A1B0GUQ0 79 aa12.52□□□□□ -0.41
TNFRSF1A-201ENST00000162749 FAM236BA0A1B0GV22 79 aa12.52□□□□□ -0.41
TNFRSF1A-201ENST00000162749 CHTF8P0CG12 524 aa12.52□□□□□ -0.41
TNFRSF1A-201ENST00000162749 MRPL55Q7Z7F7 128 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1A-201ENST00000162749 KCNQ1DNQ9H478 68 aa12.51□□□□□ -0.41
TNFRSF1A-201ENST00000162749 IMUPQ9GZP8 106 aa12.5□□□□□ -0.41
TNFRSF1A-201ENST00000162749 A0A1W2PNN7 141 aa12.5□□□□□ -0.41
TNFRSF1A-201ENST00000162749 RPL37AP8A6NKH3 93 aa12.5□□□□□ -0.41
TNFRSF1A-201ENST00000162749 JMJD7-PLA2G4BH0Y9G9 81 aa12.5□□□□□ -0.41
TNFRSF1A-201ENST00000162749 LINC00846Q9NV44 126 aa12.5□□□□□ -0.41
TNFRSF1A-201ENST00000162749 PKIGQ9Y2B9 76 aa12.5□□□□□ -0.41
TNFRSF1A-201ENST00000162749 FUSP35637 526 aaKnown RBP eCLIP12.49□□□□□ -0.41
TNFRSF1A-201ENST00000162749 IGLV1-50A0A075B6I6 118 aa12.49□□□□□ -0.41
TNFRSF1A-201ENST00000162749 ELOF1P60002 83 aaKnown RBP12.48□□□□□ -0.41
TNFRSF1A-201ENST00000162749 FAT2Q9NYQ8 4349 aa12.48□□□□□ -0.41
TNFRSF1A-201ENST00000162749 DNAH11Q96DT5 4516 aa12.48□□□□□ -0.41
TNFRSF1A-201ENST00000162749 TRBV7-6A0A0J9YX20 115 aa12.47□□□□□ -0.41
TNFRSF1A-201ENST00000162749 CCKP06307 115 aa12.47□□□□□ -0.41
TNFRSF1A-201ENST00000162749 TNP2Q05952 138 aa12.47□□□□□ -0.41
TNFRSF1A-201ENST00000162749 RTL8CO15255 209 aa12.47□□□□□ -0.41
TNFRSF1A-201ENST00000162749 COX7BP24311 80 aa12.46□□□□□ -0.42
TNFRSF1A-201ENST00000162749 PANO1I0J062 215 aa12.45□□□□□ -0.42
TNFRSF1A-201ENST00000162749 C9orf153Q5TBE3 101 aa12.45□□□□□ -0.42
TNFRSF1A-201ENST00000162749 Q6ZQY7 126 aa12.45□□□□□ -0.42
TNFRSF1A-201ENST00000162749 LINC00474Q9P2X8 69 aa12.45□□□□□ -0.42
TNFRSF1A-201ENST00000162749 DNAH5Q8TE73 4624 aa12.45□□□□□ -0.42
TNFRSF1A-201ENST00000162749 PRYO14603 147 aa12.43□□□□□ -0.42
TNFRSF1A-201ENST00000162749 C3orf22Q8N5N4 141 aa12.43□□□□□ -0.42
TNFRSF1A-201ENST00000162749 LINC00528Q8N1L1 170 aa12.43□□□□□ -0.42
TNFRSF1A-201ENST00000162749 SPRR1AP35321 89 aa12.42□□□□□ -0.42
TNFRSF1A-201ENST00000162749 PKD1P98161 4303 aa12.42□□□□□ -0.42
TNFRSF1A-201ENST00000162749 KRTAP4-16G5E9R7 235 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1A-201ENST00000162749 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.41□□□□□ -0.42
TNFRSF1A-201ENST00000162749 UQCRQO14949 82 aa12.41□□□□□ -0.42
TNFRSF1A-201ENST00000162749 IGLV5-52A0A0A0MRZ9 124 aa12.4□□□□□ -0.42
TNFRSF1A-201ENST00000162749 SPACA4Q8TDM5 124 aa12.4□□□□□ -0.42
TNFRSF1A-201ENST00000162749 RBM3P98179 157 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1A-201ENST00000162749 Q6JHZ5 121 aa12.38□□□□□ -0.43
TNFRSF1A-201ENST00000162749 LAMTOR3Q9UHA4 124 aa12.38□□□□□ -0.43
TNFRSF1A-201ENST00000162749 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF1A-201ENST00000162749 PHF5AQ7RTV0 110 aaKnown RBP12.37□□□□□ -0.43
TNFRSF1A-201ENST00000162749 IGKV3D-7A0A0C4DH55 119 aa12.37□□□□□ -0.43
TNFRSF1A-201ENST00000162749 Q6ZQT0 140 aa12.37□□□□□ -0.43
TNFRSF1A-201ENST00000162749 Q6ZRX8 168 aa12.37□□□□□ -0.43
TNFRSF1A-201ENST00000162749 DNAH8Q96JB1 4490 aa12.36□□□□□ -0.43
TNFRSF1A-201ENST00000162749 REG3GQ6UW15 175 aa12.36□□□□□ -0.43
TNFRSF1A-201ENST00000162749 LOC110117498A0A087WWA1 95 aa12.35□□□□□ -0.43
TNFRSF1A-201ENST00000162749 DPH3Q96FX2 82 aa12.35□□□□□ -0.43
TNFRSF1A-201ENST00000162749 ETDCA0A1B0GVM5 59 aa12.34□□□□□ -0.43
TNFRSF1A-201ENST00000162749 KMT2CQ8NEZ4 4911 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-201ENST00000162749 H3BQ85 93 aa12.34□□□□□ -0.43
TNFRSF1A-201ENST00000162749 KRTAP10-2P60368 255 aa12.34□□□□□ -0.43
TNFRSF1A-201ENST00000162749 LCE6AA0A183 80 aa12.33□□□□□ -0.44
TNFRSF1A-201ENST00000162749 KRTAP11-1Q8IUC1 163 aa12.33□□□□□ -0.44
TNFRSF1A-201ENST00000162749 EPM2AB3EWF7 344 aa12.33□□□□□ -0.44
TNFRSF1A-201ENST00000162749 COX7CP15954 63 aa12.32□□□□□ -0.44
TNFRSF1A-201ENST00000162749 Q9BRP9 147 aa12.32□□□□□ -0.44
TNFRSF1A-201ENST00000162749 SRRM2Q9UQ35 2752 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-201ENST00000162749 UBE2BP63146 152 aa12.31□□□□□ -0.44
TNFRSF1A-201ENST00000162749 HIST1H4AP62805 103 aaKnown RBP12.3□□□□□ -0.44
TNFRSF1A-201ENST00000162749 J3KT08 172 aa12.29□□□□□ -0.44
TNFRSF1A-201ENST00000162749 DSCR8Q96T75 97 aa12.29□□□□□ -0.44
TNFRSF1A-201ENST00000162749 DHRS4-AS1Q9P1J3 65 aa12.29□□□□□ -0.44
TNFRSF1A-201ENST00000162749 ATOX1O00244 68 aa12.27□□□□□ -0.44
TNFRSF1A-201ENST00000162749 PKHD1P08F94 4074 aa12.27□□□□□ -0.44
TNFRSF1A-201ENST00000162749 RYR2Q92736 4967 aa12.27□□□□□ -0.44
TNFRSF1A-201ENST00000162749 A0A087WVE0 104 aa12.26□□□□□ -0.45
TNFRSF1A-201ENST00000162749 CRYGAP11844 174 aa12.26□□□□□ -0.45
TNFRSF1A-201ENST00000162749 TRBV7-4A0A0J9YYF1 115 aa12.26□□□□□ -0.45
TNFRSF1A-201ENST00000162749 PLAC8Q9NZF1 115 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms