RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 GVQW2A0A096LPI5 108 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-226ENST00000641756 C15orf56Q8N910 161 aa11.9□□□□□ -0.5
PHGDH-226ENST00000641756 C22orf24Q9Y442 160 aa11.9□□□□□ -0.5
PHGDH-226ENST00000641756 LECT2O14960 151 aa11.9□□□□□ -0.5
PHGDH-226ENST00000641756 DNAL4O96015 105 aa11.9□□□□□ -0.5
PHGDH-226ENST00000641756 MT-ATP8P03928 68 aa11.9□□□□□ -0.5
PHGDH-226ENST00000641756 CAMK2N2Q96S95 79 aa11.9□□□□□ -0.5
PHGDH-226ENST00000641756 TMEM126AQ9H061 195 aa11.89□□□□□ -0.51
PHGDH-226ENST00000641756 XAGE1AQ9HD64 81 aa11.89□□□□□ -0.51
PHGDH-226ENST00000641756 LINC00588Q9Y4M8 146 aa11.89□□□□□ -0.51
PHGDH-226ENST00000641756 C15orf53Q8NAA6 179 aa11.88□□□□□ -0.51
PHGDH-226ENST00000641756 MUC7Q8TAX7 377 aa11.88□□□□□ -0.51
PHGDH-226ENST00000641756 DNAH10OSP0CZ25 163 aa11.87□□□□□ -0.51
PHGDH-226ENST00000641756 S100A7L2Q5SY68 101 aa11.87□□□□□ -0.51
PHGDH-226ENST00000641756 MGAM2Q2M2H8 2515 aa11.87□□□□□ -0.51
PHGDH-226ENST00000641756 Q6ZRU5 148 aa11.87□□□□□ -0.51
PHGDH-226ENST00000641756 MDFIQ99750 246 aa11.87□□□□□ -0.51
PHGDH-226ENST00000641756 SLPIP03973 132 aa11.86□□□□□ -0.51
PHGDH-226ENST00000641756 RPL18AQ02543 176 aaKnown RBP11.85□□□□□ -0.51
PHGDH-226ENST00000641756 C6orf99Q4VX62 202 aa11.83□□□□□ -0.52
PHGDH-226ENST00000641756 C2orf48Q96LS8 159 aa11.81□□□□□ -0.52
PHGDH-226ENST00000641756 C9orf129Q5T035 196 aaKnown RBP11.81□□□□□ -0.52
PHGDH-226ENST00000641756 SCGB1A1P11684 91 aa11.8□□□□□ -0.52
PHGDH-226ENST00000641756 IGLV6-57P01721 117 aa11.79□□□□□ -0.52
PHGDH-226ENST00000641756 GAGE2EQ4V326 116 aa11.79□□□□□ -0.52
PHGDH-226ENST00000641756 GAGE2DQ9UEU5 116 aa11.79□□□□□ -0.52
PHGDH-226ENST00000641756 Q8N814 137 aa11.78□□□□□ -0.52
PHGDH-226ENST00000641756 ORMDL1Q9P0S3 153 aa11.78□□□□□ -0.52
PHGDH-226ENST00000641756 TRBV10-3A0A0K0K1G6 114 aa11.77□□□□□ -0.52
PHGDH-226ENST00000641756 FAM240AA0A1B0GVK7 77 aa11.77□□□□□ -0.52
PHGDH-226ENST00000641756 NDUFC2-KCTD14E9PQ53 114 aa11.77□□□□□ -0.52
PHGDH-226ENST00000641756 CASC10Q5T4H9 136 aa11.77□□□□□ -0.53
PHGDH-226ENST00000641756 SYCNQ0VAF6 134 aa11.76□□□□□ -0.53
PHGDH-226ENST00000641756 A0A1B0GV72 72 aa11.75□□□□□ -0.53
PHGDH-226ENST00000641756 TTC32Q5I0X7 151 aa11.75□□□□□ -0.53
PHGDH-226ENST00000641756 Q6ZRP5 223 aa11.75□□□□□ -0.53
PHGDH-226ENST00000641756 LINC00167Q96N53 147 aa11.75□□□□□ -0.53
PHGDH-226ENST00000641756 DNAH1Q9P2D7 4330 aa11.75□□□□□ -0.53
PHGDH-226ENST00000641756 DNAH9Q9NYC9 4486 aa11.75□□□□□ -0.53
PHGDH-226ENST00000641756 A0A1B0GX51 115 aa11.75□□□□□ -0.53
PHGDH-226ENST00000641756 INAFM2P0DMQ5 153 aa11.75□□□□□ -0.53
PHGDH-226ENST00000641756 VPREB1P12018 145 aa11.75□□□□□ -0.53
PHGDH-226ENST00000641756 SNCGO76070 127 aa11.74□□□□□ -0.53
PHGDH-226ENST00000641756 C14orf132Q9NPU4 83 aa11.74□□□□□ -0.53
PHGDH-226ENST00000641756 LINC00575Q6W349 94 aa11.73□□□□□ -0.53
PHGDH-226ENST00000641756 TRAV23DV6A0A075B6W5 121 aa11.72□□□□□ -0.53
PHGDH-226ENST00000641756 GAGE2AQ6NT46 116 aa11.72□□□□□ -0.53
PHGDH-226ENST00000641756 USP17L23D6RBM5 183 aa11.72□□□□□ -0.53
PHGDH-226ENST00000641756 F8WDY8 70 aa11.71□□□□□ -0.53
PHGDH-226ENST00000641756 UPK3BQ9BT76 320 aa11.71□□□□□ -0.53
PHGDH-226ENST00000641756 COL7A1Q02388 2944 aa11.71□□□□□ -0.54
PHGDH-226ENST00000641756 OBSCN-AS1Q96MR7 158 aa11.71□□□□□ -0.54
PHGDH-226ENST00000641756 ACYP1P07311 99 aa11.7□□□□□ -0.54
PHGDH-226ENST00000641756 hADV29S1A0JD25 119 aa11.69□□□□□ -0.54
PHGDH-226ENST00000641756 DIRC1Q969H9 104 aa11.69□□□□□ -0.54
PHGDH-226ENST00000641756 M0R378 163 aa11.68□□□□□ -0.54
PHGDH-226ENST00000641756 RMI2Q96E14 147 aa11.68□□□□□ -0.54
PHGDH-226ENST00000641756 STAB2Q8WWQ8 2551 aa11.68□□□□□ -0.54
PHGDH-226ENST00000641756 ZNF73O43830 326 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-226ENST00000641756 SMCR5Q8TEV8 140 aa11.68□□□□□ -0.54
PHGDH-226ENST00000641756 LYSTQ99698 3801 aa11.67□□□□□ -0.54
PHGDH-226ENST00000641756 TMEM256-PLSCR3K7ERE1 68 aa11.66□□□□□ -0.54
PHGDH-226ENST00000641756 B9D2Q9BPU9 175 aa11.66□□□□□ -0.54
PHGDH-226ENST00000641756 GAGE2BQ13066 116 aa11.66□□□□□ -0.54
PHGDH-226ENST00000641756 KRTAP1-5Q9BYS1 174 aa11.64□□□□□ -0.55
PHGDH-226ENST00000641756 COX7BP24311 80 aa11.63□□□□□ -0.55
PHGDH-226ENST00000641756 SERTAD4-AS1Q5TG53 156 aa11.63□□□□□ -0.55
PHGDH-226ENST00000641756 Q6ZQY7 126 aa11.62□□□□□ -0.55
PHGDH-226ENST00000641756 APLNQ9ULZ1 77 aa11.62□□□□□ -0.55
PHGDH-226ENST00000641756 UBE2DNLQ8IWF7 75 aa11.62□□□□□ -0.55
PHGDH-226ENST00000641756 TLX1NBP0CAT3 122 aa11.61□□□□□ -0.55
PHGDH-226ENST00000641756 ELOF1P60002 83 aaKnown RBP11.61□□□□□ -0.55
PHGDH-226ENST00000641756 JMJD7-PLA2G4BH0Y9G9 81 aa11.6□□□□□ -0.55
PHGDH-226ENST00000641756 NKAPP1Q8N9T2 125 aa11.6□□□□□ -0.55
PHGDH-226ENST00000641756 SDIM1Q6ZPB5 146 aa11.59□□□□□ -0.55
PHGDH-226ENST00000641756 DNAH10Q8IVF4 4471 aa11.59□□□□□ -0.55
PHGDH-226ENST00000641756 FAM168BA1KXE4 195 aa11.59□□□□□ -0.55
PHGDH-226ENST00000641756 Q6Q795 121 aa11.58□□□□□ -0.56
PHGDH-226ENST00000641756 LINC00643Q86TS7 51 aa11.58□□□□□ -0.56
PHGDH-226ENST00000641756 C7orf33Q8WU49 177 aa11.58□□□□□ -0.56
PHGDH-226ENST00000641756 TRBV7-6A0A0J9YX20 115 aa11.57□□□□□ -0.56
PHGDH-226ENST00000641756 DYNC2H1Q8NCM8 4307 aaKnown RBP11.56□□□□□ -0.56
PHGDH-226ENST00000641756 CCKP06307 115 aa11.56□□□□□ -0.56
PHGDH-226ENST00000641756 LINC00846Q9NV44 126 aa11.56□□□□□ -0.56
PHGDH-226ENST00000641756 LAMTOR3Q9UHA4 124 aa11.56□□□□□ -0.56
PHGDH-226ENST00000641756 TRBV7-7A0A0K0K1E9 115 aa11.55□□□□□ -0.56
PHGDH-226ENST00000641756 LINC00528Q8N1L1 170 aa11.54□□□□□ -0.56
PHGDH-226ENST00000641756 CSMD3Q7Z407 3707 aa11.54□□□□□ -0.56
PHGDH-226ENST00000641756 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-226ENST00000641756 PLA2G2DQ9UNK4 145 aa11.53□□□□□ -0.56
PHGDH-226ENST00000641756 RPL37AP8A6NKH3 93 aa11.53□□□□□ -0.56
PHGDH-226ENST00000641756 PSCAO43653 123 aa11.53□□□□□ -0.56
PHGDH-226ENST00000641756 KRTAP7-1Q8IUC3 87 aa11.53□□□□□ -0.56
PHGDH-226ENST00000641756 KCNQ1DNQ9H478 68 aa11.53□□□□□ -0.56
PHGDH-226ENST00000641756 PLECQ15149 4684 aaKnown RBP11.52□□□□□ -0.56
PHGDH-226ENST00000641756 RBM3P98179 157 aaKnown RBP11.52□□□□□ -0.57
PHGDH-226ENST00000641756 DNAH7Q8WXX0 4024 aa11.52□□□□□ -0.57
PHGDH-226ENST00000641756 NDUFV3P56181 108 aaKnown RBP11.51□□□□□ -0.57
PHGDH-226ENST00000641756 ANAPC13Q9BS18 74 aa11.51□□□□□ -0.57
PHGDH-226ENST00000641756 LOC107984640A0A0U1RRK4 108 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms