RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 C9orf116Q5BN46 136 aaPredicted RBP6.13□□□□□ -1.43
LINC00339-210ENST00000635675 MIEN1Q9BRT3 115 aa6.13□□□□□ -1.43
LINC00339-210ENST00000635675 FAT1Q14517 4588 aa6.13□□□□□ -1.43
LINC00339-210ENST00000635675 NDUFC2-KCTD14E9PQ53 114 aa6.12□□□□□ -1.43
LINC00339-210ENST00000635675 DDTP30046 118 aa6.12□□□□□ -1.43
LINC00339-210ENST00000635675 CXCL5P42830 114 aa6.12□□□□□ -1.43
LINC00339-210ENST00000635675 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
LINC00339-210ENST00000635675 MYMXA0A1B0GTQ4 84 aa6.11□□□□□ -1.43
LINC00339-210ENST00000635675 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
LINC00339-210ENST00000635675 ZNF625Q96I27 306 aaPredicted RBP6.11□□□□□ -1.43
LINC00339-210ENST00000635675 KRTAP4-6Q9BYQ5 205 aa6.11□□□□□ -1.43
LINC00339-210ENST00000635675 VPS13BQ7Z7G8 4022 aa6.11□□□□□ -1.43
LINC00339-210ENST00000635675 LINC00587B1AMM8 73 aa6.1□□□□□ -1.43
LINC00339-210ENST00000635675 INAFM2P0DMQ5 153 aa6.1□□□□□ -1.43
LINC00339-210ENST00000635675 GAGE2EQ4V326 116 aa6.1□□□□□ -1.43
LINC00339-210ENST00000635675 SCGB1D4Q6XE38 83 aa6.1□□□□□ -1.43
LINC00339-210ENST00000635675 C2orf91Q6ZV80 131 aa6.1□□□□□ -1.43
LINC00339-210ENST00000635675 BOD1L2Q8IYS8 172 aa6.1□□□□□ -1.43
LINC00339-210ENST00000635675 GAGE2DQ9UEU5 116 aa6.1□□□□□ -1.43
LINC00339-210ENST00000635675 RPL37AP61513 92 aaKnown RBP6.09□□□□□ -1.43
LINC00339-210ENST00000635675 CTAG1AP78358 180 aa6.09□□□□□ -1.43
LINC00339-210ENST00000635675 NDUFA12Q9UI09 145 aa6.09□□□□□ -1.43
LINC00339-210ENST00000635675 A0A0U1RRA0 63 aa6.08□□□□□ -1.44
LINC00339-210ENST00000635675 FAM168BA1KXE4 195 aa6.08□□□□□ -1.44
LINC00339-210ENST00000635675 BATFQ16520 125 aa6.08□□□□□ -1.44
LINC00339-210ENST00000635675 C9orf129Q5T035 196 aaKnown RBP6.08□□□□□ -1.44
LINC00339-210ENST00000635675 LCE2CQ5TA81 110 aa6.08□□□□□ -1.44
LINC00339-210ENST00000635675 C7orf33Q8WU49 177 aa6.08□□□□□ -1.44
LINC00339-210ENST00000635675 MEIG1Q5JSS6 88 aa6.08□□□□□ -1.44
LINC00339-210ENST00000635675 KRTAP7-1Q8IUC3 87 aa6.08□□□□□ -1.44
LINC00339-210ENST00000635675 DLEU1O43261 78 aa6.07□□□□□ -1.44
LINC00339-210ENST00000635675 HINT1P49773 126 aaPredicted RBP6.07□□□□□ -1.44
LINC00339-210ENST00000635675 NPC2P61916 151 aa6.07□□□□□ -1.44
LINC00339-210ENST00000635675 FLG2Q5D862 2391 aaPredicted RBP6.06□□□□□ -1.44
LINC00339-210ENST00000635675 A0A0J9YXY3 114 aa6.06□□□□□ -1.44
LINC00339-210ENST00000635675 SFTA2Q6UW10 78 aa6.06□□□□□ -1.44
LINC00339-210ENST00000635675 XAGE1AQ9HD64 81 aa6.06□□□□□ -1.44
LINC00339-210ENST00000635675 PHF5AQ7RTV0 110 aaKnown RBP6.05□□□□□ -1.44
LINC00339-210ENST00000635675 FAM19A5Q7Z5A7 132 aaPredicted RBP6.05□□□□□ -1.44
LINC00339-210ENST00000635675 DAND5Q8N907 189 aa6.05□□□□□ -1.44
LINC00339-210ENST00000635675 HIST1H4GQ99525 98 aa6.05□□□□□ -1.44
LINC00339-210ENST00000635675 SMIM13P0DJ93 91 aa6.04□□□□□ -1.44
LINC00339-210ENST00000635675 PFN2P35080 140 aa6.04□□□□□ -1.44
LINC00339-210ENST00000635675 PRR3P79522 188 aaKnown RBP6.04□□□□□ -1.44
LINC00339-210ENST00000635675 HSD52Q0P140 79 aa6.04□□□□□ -1.44
LINC00339-210ENST00000635675 COX17Q14061 63 aa6.04□□□□□ -1.44
LINC00339-210ENST00000635675 SERTAD4-AS1Q5TG53 156 aa6.04□□□□□ -1.44
LINC00339-210ENST00000635675 ERG28Q9UKR5 140 aa6.04□□□□□ -1.44
LINC00339-210ENST00000635675 SRSF9Q13242 221 aaKnown RBP eCLIP6.03□□□□□ -1.44
LINC00339-210ENST00000635675 HIGD1BQ9P298 99 aa6.03□□□□□ -1.44
LINC00339-210ENST00000635675 TMEM238C9JI98 176 aa6.02□□□□□ -1.45
LINC00339-210ENST00000635675 M0QXV9 152 aa6.02□□□□□ -1.45
LINC00339-210ENST00000635675 SMCPP49901 116 aaPredicted RBP6.02□□□□□ -1.45
LINC00339-210ENST00000635675 LINC00158P58513 81 aa6.02□□□□□ -1.45
LINC00339-210ENST00000635675 HERV-K104P63124 156 aa6.02□□□□□ -1.45
LINC00339-210ENST00000635675 KRTAP11-1Q8IUC1 163 aa6.02□□□□□ -1.45
LINC00339-210ENST00000635675 PLA2G2DQ9UNK4 145 aa6.02□□□□□ -1.45
LINC00339-210ENST00000635675 ADAMTSL4-AS1Q5T5F5 129 aa6.01□□□□□ -1.45
LINC00339-210ENST00000635675 SNHG12Q9BXW3 62 aa6.01□□□□□ -1.45
LINC00339-210ENST00000635675 SND1-IT1Q9HBX3 110 aa6.01□□□□□ -1.45
LINC00339-210ENST00000635675 PSORS1C2Q9UIG4 136 aa6.01□□□□□ -1.45
LINC00339-210ENST00000635675 C22orf24Q9Y442 160 aa6.01□□□□□ -1.45
LINC00339-210ENST00000635675 J3QL48 77 aa6□□□□□ -1.45
LINC00339-210ENST00000635675 M0R143 59 aa6□□□□□ -1.45
LINC00339-210ENST00000635675 FXYD2P54710 66 aa6□□□□□ -1.45
LINC00339-210ENST00000635675 BVES-AS1Q5T3Y7 98 aa6□□□□□ -1.45
LINC00339-210ENST00000635675 CEND1Q8N111 149 aa6□□□□□ -1.45
LINC00339-210ENST00000635675 LITAFQ99732 161 aa6□□□□□ -1.45
LINC00339-210ENST00000635675 IGLV5-37A0A075B6J1 123 aa5.99□□□□□ -1.45
LINC00339-210ENST00000635675 MUSTN1Q8IVN3 82 aa5.99□□□□□ -1.45
LINC00339-210ENST00000635675 MIR7-3HGQ8N6C7 128 aa5.99□□□□□ -1.45
LINC00339-210ENST00000635675 SPANXB1Q9NS25 103 aaPredicted RBP5.99□□□□□ -1.45
LINC00339-210ENST00000635675 K7ERJ3 54 aa5.99□□□□□ -1.45
LINC00339-210ENST00000635675 LBHQ53QV2 105 aaPredicted RBP5.99□□□□□ -1.45
LINC00339-210ENST00000635675 MRPL55Q7Z7F7 128 aaKnown RBP5.99□□□□□ -1.45
LINC00339-210ENST00000635675 SPANXDQ9BXN6 97 aa5.99□□□□□ -1.45
LINC00339-210ENST00000635675 SPANXCQ9NY87 97 aa5.99□□□□□ -1.45
LINC00339-210ENST00000635675 KRTAP29-1A8MX34 341 aaPredicted RBP5.98□□□□□ -1.45
LINC00339-210ENST00000635675 TIMM17BO60830 172 aa5.98□□□□□ -1.45
LINC00339-210ENST00000635675 UBE2BP63146 152 aa5.98□□□□□ -1.45
LINC00339-210ENST00000635675 TAL2Q16559 108 aa5.98□□□□□ -1.45
LINC00339-210ENST00000635675 C1orf137Q5JT78 98 aa5.98□□□□□ -1.45
LINC00339-210ENST00000635675 NHP2Q9NX24 153 aaKnown RBP5.98□□□□□ -1.45
LINC00339-210ENST00000635675 MYCBP2O75592 4640 aa5.97□□□□□ -1.45
LINC00339-210ENST00000635675 EIF4EBP3O60516 100 aaPredicted RBP5.97□□□□□ -1.45
LINC00339-210ENST00000635675 VPREB1P12018 145 aa5.97□□□□□ -1.45
LINC00339-210ENST00000635675 SPINK6Q6UWN8 80 aa5.97□□□□□ -1.45
LINC00339-210ENST00000635675 SOSTDC1Q6X4U4 206 aa5.97□□□□□ -1.45
LINC00339-210ENST00000635675 Q8NDZ9 215 aa5.97□□□□□ -1.45
LINC00339-210ENST00000635675 LINC00308Q8TCZ7 52 aa5.97□□□□□ -1.45
LINC00339-210ENST00000635675 LINC00167Q96N53 147 aa5.97□□□□□ -1.45
LINC00339-210ENST00000635675 PKHD1L1Q86WI1 4243 aa5.96□□□□□ -1.45
LINC00339-210ENST00000635675 A4D1N5 150 aa5.96□□□□□ -1.46
LINC00339-210ENST00000635675 OXTP01178 125 aa5.96□□□□□ -1.46
LINC00339-210ENST00000635675 IGLV7-43P04211 117 aa5.96□□□□□ -1.46
LINC00339-210ENST00000635675 NKAPP1Q8N9T2 125 aa5.96□□□□□ -1.46
LINC00339-210ENST00000635675 RAB37Q96AX2 223 aa5.96□□□□□ -1.46
LINC00339-210ENST00000635675 DMBT1Q9UGM3 2413 aaPredicted RBP5.96□□□□□ -1.46
LINC00339-210ENST00000635675 GAGE10A6NGK3 116 aa5.95□□□□□ -1.46
LINC00339-210ENST00000635675 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms