RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 SMIM6P0DI80 62 aa4.22□□□□□ -1.73
SMARCA2-244ENST00000635659 FABP4P15090 132 aa4.22□□□□□ -1.73
SMARCA2-244ENST00000635659 CKS2P33552 79 aa4.22□□□□□ -1.73
SMARCA2-244ENST00000635659 AKR1D1P51857 326 aa4.22□□□□□ -1.73
SMARCA2-244ENST00000635659 PDZD11Q5EBL8 140 aa4.22□□□□□ -1.73
SMARCA2-244ENST00000635659 RMI2Q96E14 147 aa4.22□□□□□ -1.73
SMARCA2-244ENST00000635659 HMCN2Q8NDA2 5059 aa4.22□□□□□ -1.73
SMARCA2-244ENST00000635659 TRBV25-1A0A075B6N4 114 aa4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 LINC01546A6NGU7 62 aa4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 NUPR1O60356 82 aa4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 PPP1R17O96001 155 aa4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 NPYP01303 97 aa4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 CRPP02741 224 aa4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 ANGP03950 147 aaKnown RBP4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 LINC00614P0C842 121 aa4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 SMIM17P0DL12 118 aa4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 KRTAP10-4P60372 401 aaPredicted RBP4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 RBX1P62877 108 aa4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 MIAQ16674 131 aa4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 TMEM97Q5BJF2 176 aa4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 CLPSL2Q6UWE3 100 aa4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 MAP1LC3AQ9H492 121 aa4.21□□□□□ -1.74
SMARCA2-244ENST00000635659 IGLV4-60A0A075B6I1 120 aa4.2□□□□□ -1.74
SMARCA2-244ENST00000635659 TRAV26-2A0A0B4J265 109 aa4.2□□□□□ -1.74
SMARCA2-244ENST00000635659 IGHV1-24A0A0C4DH33 117 aa4.2□□□□□ -1.74
SMARCA2-244ENST00000635659 NCR2O95944 276 aa4.2□□□□□ -1.74
SMARCA2-244ENST00000635659 PKIAP61925 76 aa4.2□□□□□ -1.74
SMARCA2-244ENST00000635659 FA2HQ7L5A8 372 aa4.2□□□□□ -1.74
SMARCA2-244ENST00000635659 SCXQ7RTU7 201 aa4.2□□□□□ -1.74
SMARCA2-244ENST00000635659 OR10D4PQ8NGN7 298 aa4.2□□□□□ -1.74
SMARCA2-244ENST00000635659 RPL39LQ96EH5 51 aaKnown RBP4.2□□□□□ -1.74
SMARCA2-244ENST00000635659 C20orf78Q9BR46 151 aa4.2□□□□□ -1.74
SMARCA2-244ENST00000635659 NXT2Q9NPJ8 142 aaKnown RBP4.2□□□□□ -1.74
SMARCA2-244ENST00000635659 TMEM262E9PQX1 116 aa4.19□□□□□ -1.74
SMARCA2-244ENST00000635659 K7EMI3 77 aa4.19□□□□□ -1.74
SMARCA2-244ENST00000635659 INAFM2P0DMQ5 153 aa4.19□□□□□ -1.74
SMARCA2-244ENST00000635659 IFI27P40305 119 aaPredicted RBP4.19□□□□□ -1.74
SMARCA2-244ENST00000635659 JOSD1Q15040 202 aaPredicted RBP4.19□□□□□ -1.74
SMARCA2-244ENST00000635659 LINC00269Q8N2A0 174 aa4.19□□□□□ -1.74
SMARCA2-244ENST00000635659 Q8N8P6 123 aa4.19□□□□□ -1.74
SMARCA2-244ENST00000635659 SND1-IT1Q9HBX3 110 aa4.19□□□□□ -1.74
SMARCA2-244ENST00000635659 NIT2Q9NQR4 276 aa4.19□□□□□ -1.74
SMARCA2-244ENST00000635659 RBM12B-AS1Q9P1G2 102 aa4.19□□□□□ -1.74
SMARCA2-244ENST00000635659 TRBV6-5A0A0K0K1A5 114 aa4.18□□□□□ -1.74
SMARCA2-244ENST00000635659 PYY3Q5JQD4 70 aa4.18□□□□□ -1.74
SMARCA2-244ENST00000635659 FAM19A2Q8N3H0 131 aa4.18□□□□□ -1.74
SMARCA2-244ENST00000635659 DEFB104AQ8WTQ1 72 aa4.18□□□□□ -1.74
SMARCA2-244ENST00000635659 C12orf57Q99622 126 aa4.18□□□□□ -1.74
SMARCA2-244ENST00000635659 SMIM2Q9BVW6 85 aa4.18□□□□□ -1.74
SMARCA2-244ENST00000635659 TNXBP22105 4242 aa4.18□□□□□ -1.74
SMARCA2-244ENST00000635659 IGLV10-54A0A075B6I4 117 aa4.17□□□□□ -1.74
SMARCA2-244ENST00000635659 LEPROTL1O95214 131 aa4.17□□□□□ -1.74
SMARCA2-244ENST00000635659 HBDP02042 147 aa4.17□□□□□ -1.74
SMARCA2-244ENST00000635659 SPANXB1Q9NS25 103 aaPredicted RBP4.17□□□□□ -1.74
SMARCA2-244ENST00000635659 HSPB8Q9UJY1 196 aa4.17□□□□□ -1.74
SMARCA2-244ENST00000635659 CBY1Q9Y3M2 126 aa4.17□□□□□ -1.74
SMARCA2-244ENST00000635659 TRBV27A0A0K0K1C4 114 aa4.16□□□□□ -1.74
SMARCA2-244ENST00000635659 SDHAF1A6NFY7 115 aa4.16□□□□□ -1.74
SMARCA2-244ENST00000635659 C3orf79P0CE67 100 aa4.16□□□□□ -1.74
SMARCA2-244ENST00000635659 POLR2KP53803 58 aaKnown RBP4.16□□□□□ -1.74
SMARCA2-244ENST00000635659 CNBPP62633 177 aaKnown RBP4.16□□□□□ -1.74
SMARCA2-244ENST00000635659 CIRBPQ14011 172 aaKnown RBP4.16□□□□□ -1.74
SMARCA2-244ENST00000635659 PMCHL1Q16048 86 aa4.16□□□□□ -1.74
SMARCA2-244ENST00000635659 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
SMARCA2-244ENST00000635659 C9orf163Q8N9P6 203 aa4.16□□□□□ -1.74
SMARCA2-244ENST00000635659 ST20Q9HBF5 79 aa4.16□□□□□ -1.74
SMARCA2-244ENST00000635659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.15□□□□□ -1.75
SMARCA2-244ENST00000635659 IGKV2-29A2NJV5 120 aaPredicted RBP4.15□□□□□ -1.75
SMARCA2-244ENST00000635659 LINC01549A6NIU2 74 aa4.15□□□□□ -1.75
SMARCA2-244ENST00000635659 FCER1GP30273 86 aa4.15□□□□□ -1.75
SMARCA2-244ENST00000635659 KRTDAPP60985 99 aa4.15□□□□□ -1.75
SMARCA2-244ENST00000635659 Q8N9L7 120 aa4.15□□□□□ -1.75
SMARCA2-244ENST00000635659 C20orf202A1L168 122 aa4.14□□□□□ -1.75
SMARCA2-244ENST00000635659 SYS1-DBNDD2H3BUS1 97 aa4.14□□□□□ -1.75
SMARCA2-244ENST00000635659 UBE2L6O14933 153 aa4.14□□□□□ -1.75
SMARCA2-244ENST00000635659 FGF6P10767 208 aa4.14□□□□□ -1.75
SMARCA2-244ENST00000635659 G0S2P27469 103 aa4.14□□□□□ -1.75
SMARCA2-244ENST00000635659 SDIM1Q6ZPB5 146 aa4.14□□□□□ -1.75
SMARCA2-244ENST00000635659 I3L3M4 83 aa4.13□□□□□ -1.75
SMARCA2-244ENST00000635659 ZNF25P17030 456 aaPredicted RBP4.13□□□□□ -1.75
SMARCA2-244ENST00000635659 S100A12P80511 92 aa4.13□□□□□ -1.75
SMARCA2-244ENST00000635659 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
SMARCA2-244ENST00000635659 LINC01545Q5VT33 79 aa4.13□□□□□ -1.75
SMARCA2-244ENST00000635659 TOMM6Q96B49 74 aa4.13□□□□□ -1.75
SMARCA2-244ENST00000635659 IFI27L1Q96BM0 104 aa4.13□□□□□ -1.75
SMARCA2-244ENST00000635659 ANAPC13Q9BS18 74 aa4.13□□□□□ -1.75
SMARCA2-244ENST00000635659 GVQW2A0A096LPI5 108 aaPredicted RBP4.12□□□□□ -1.75
SMARCA2-244ENST00000635659 IGKV3OR2-268A0A0C4DH90 116 aa4.12□□□□□ -1.75
SMARCA2-244ENST00000635659 C8orf87E5RJ46 101 aa4.12□□□□□ -1.75
SMARCA2-244ENST00000635659 SCGB1C2P0DMR2 95 aa4.12□□□□□ -1.75
SMARCA2-244ENST00000635659 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
SMARCA2-244ENST00000635659 OR5A1Q8NGJ0 315 aa4.12□□□□□ -1.75
SMARCA2-244ENST00000635659 SPACA4Q8TDM5 124 aa4.12□□□□□ -1.75
SMARCA2-244ENST00000635659 CYSLTR1Q9Y271 337 aa4.12□□□□□ -1.75
SMARCA2-244ENST00000635659 UBR4Q5T4S7 5183 aa4.12□□□□□ -1.75
SMARCA2-244ENST00000635659 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.11□□□□□ -1.75
SMARCA2-244ENST00000635659 C4orf26Q17RF5 130 aa4.11□□□□□ -1.75
SMARCA2-244ENST00000635659 AMMECR1LQ6DCA0 310 aa4.11□□□□□ -1.75
SMARCA2-244ENST00000635659 VAMP8Q9BV40 100 aa4.11□□□□□ -1.75
SMARCA2-244ENST00000635659 CDC42SE2Q9NRR3 84 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms