RNA–Protein interactions for RNA: ENST00000629387.2

TCF4-268, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-268ENST00000629387 NDUFA4O00483 81 aa4.02□□□□□ -1.77
TCF4-268ENST00000629387 SLURP1P55000 103 aa4.02□□□□□ -1.77
TCF4-268ENST00000629387 SUMO4Q6EEV6 95 aa4.02□□□□□ -1.77
TCF4-268ENST00000629387 ZNF575Q86XF7 245 aa4.02□□□□□ -1.77
TCF4-268ENST00000629387 IGLV2-18A0A075B6J9 118 aa4.02□□□□□ -1.77
TCF4-268ENST00000629387 Q6ZR54 194 aa4.02□□□□□ -1.77
TCF4-268ENST00000629387 SETXQ7Z333 2677 aaKnown RBP4.02□□□□□ -1.77
TCF4-268ENST00000629387 HECTD1Q9ULT8 2610 aa4.02□□□□□ -1.77
TCF4-268ENST00000629387 A0A087WYN8 130 aa4.02□□□□□ -1.77
TCF4-268ENST00000629387 DNAJC9-AS1A6NH13 148 aa4.02□□□□□ -1.77
TCF4-268ENST00000629387 SPINK7P58062 85 aa4.02□□□□□ -1.77
TCF4-268ENST00000629387 C22orf24Q9Y442 160 aa4.02□□□□□ -1.77
TCF4-268ENST00000629387 LY6G6DO95868 133 aa4.01□□□□□ -1.77
TCF4-268ENST00000629387 IGLV2-23P01705 113 aa4.01□□□□□ -1.77
TCF4-268ENST00000629387 ADAMTS20P59510 1910 aa4.01□□□□□ -1.77
TCF4-268ENST00000629387 IGHV4-4A0A075B6R2 117 aa4.01□□□□□ -1.77
TCF4-268ENST00000629387 LINC00467Q9BRT7 94 aa4.01□□□□□ -1.77
TCF4-268ENST00000629387 IGKV2-40A0A087WW87 121 aaPredicted RBP4□□□□□ -1.77
TCF4-268ENST00000629387 IGKV2D-40P01614 121 aaPredicted RBP4□□□□□ -1.77
TCF4-268ENST00000629387 LINC00308Q8TCZ7 52 aa4□□□□□ -1.77
TCF4-268ENST00000629387 MAST4O15021 2626 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 IGLV1-47P01700 117 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 SMIM29Q86T20 159 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 OCR1Q9BZK8 76 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 CLPSL1A2RUU4 121 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 ELOF1P60002 83 aaKnown RBP3.99□□□□□ -1.77
TCF4-268ENST00000629387 RPL39P62891 51 aaKnown RBP3.99□□□□□ -1.77
TCF4-268ENST00000629387 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 LINC00167Q96N53 147 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 RHPN1-AS1Q9BWJ2 59 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 A0A1W2PNM2 257 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 CTSGP08311 255 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 CRIP1P50238 77 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 Q8N9L7 120 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 USMG5Q96IX5 58 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 CR1P17927 2039 aa3.99□□□□□ -1.77
TCF4-268ENST00000629387 FREM2Q5SZK8 3169 aa3.98□□□□□ -1.77
TCF4-268ENST00000629387 CIRBP-AS1Q8TBR5 109 aa3.98□□□□□ -1.77
TCF4-268ENST00000629387 COX7B2Q8TF08 81 aa3.98□□□□□ -1.77
TCF4-268ENST00000629387 OBSCN-AS1Q96MR7 158 aa3.98□□□□□ -1.77
TCF4-268ENST00000629387 DSPP15924 2871 aaKnown RBP3.98□□□□□ -1.77
TCF4-268ENST00000629387 CHD6Q8TD26 2715 aa3.98□□□□□ -1.77
TCF4-268ENST00000629387 IGKV1OR2-108A0A075B7D4 117 aa3.98□□□□□ -1.77
TCF4-268ENST00000629387 IGLV1-40P01703 118 aa3.98□□□□□ -1.77
TCF4-268ENST00000629387 C20orf166-AS1Q96NR2 134 aa3.98□□□□□ -1.77
TCF4-268ENST00000629387 MAP1AP78559 2803 aaPredicted RBP3.98□□□□□ -1.77
TCF4-268ENST00000629387 IGLV5-52A0A0A0MRZ9 124 aa3.98□□□□□ -1.77
TCF4-268ENST00000629387 EGFEM1PQ0D2K5 195 aa3.97□□□□□ -1.77
TCF4-268ENST00000629387 CSNK1G2-AS1Q8NCQ2 148 aa3.97□□□□□ -1.77
TCF4-268ENST00000629387 RPL39LQ96EH5 51 aaKnown RBP3.97□□□□□ -1.77
TCF4-268ENST00000629387 KLK9Q9UKQ9 250 aa3.97□□□□□ -1.77
TCF4-268ENST00000629387 IGKV1-17P01599 117 aa3.97□□□□□ -1.77
TCF4-268ENST00000629387 P0C879 139 aa3.97□□□□□ -1.77
TCF4-268ENST00000629387 LITAFQ99732 161 aa3.97□□□□□ -1.77
TCF4-268ENST00000629387 A6NDX4 124 aa3.96□□□□□ -1.78
TCF4-268ENST00000629387 H0Y9P7 68 aa3.96□□□□□ -1.78
TCF4-268ENST00000629387 Q8N9W7 124 aa3.96□□□□□ -1.78
TCF4-268ENST00000629387 IGKV2-29A2NJV5 120 aaPredicted RBP3.96□□□□□ -1.78
TCF4-268ENST00000629387 LENEPQ9Y5L5 61 aa3.96□□□□□ -1.78
TCF4-268ENST00000629387 USP24Q9UPU5 2620 aa3.96□□□□□ -1.78
TCF4-268ENST00000629387 Q8NDZ9 215 aa3.96□□□□□ -1.78
TCF4-268ENST00000629387 K7EIM0 57 aa3.95□□□□□ -1.78
TCF4-268ENST00000629387 PDE6GP18545 87 aa3.95□□□□□ -1.78
TCF4-268ENST00000629387 IGHV3-53P01767 116 aa3.95□□□□□ -1.78
TCF4-268ENST00000629387 DEFB131AP59861 70 aa3.95□□□□□ -1.78
TCF4-268ENST00000629387 LINC01006Q8NI28 216 aa3.95□□□□□ -1.78
TCF4-268ENST00000629387 SMIM11BQ8TCY0 68 aa3.95□□□□□ -1.78
TCF4-268ENST00000629387 PDE6HQ13956 83 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 DEFB136Q30KP8 78 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 C9orf47Q6ZRZ4 202 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 CELSR3Q9NYQ7 3312 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 IGLV5-37A0A075B6J1 123 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 TRGV2A0A075B6R0 118 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 IGKV3OR2-268A0A0C4DH90 116 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 ETDCA0A1B0GVM5 59 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 NTM-AS1Q6ZSK4 140 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 COA5Q86WW8 74 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 NPBQ8NG41 125 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 IGLV8-61A0A075B6I0 122 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 A0A1W2PPR1 153 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 I3L2K1 104 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 HTN3P15516 51 aa3.94□□□□□ -1.78
TCF4-268ENST00000629387 LCE2AQ5TA79 106 aaPredicted RBP3.94□□□□□ -1.78
TCF4-268ENST00000629387 IGLV11-55A0A075B6I3 123 aa3.93□□□□□ -1.78
TCF4-268ENST00000629387 TRGV4A0A0C4DH28 118 aa3.93□□□□□ -1.78
TCF4-268ENST00000629387 H3BRN7 92 aa3.93□□□□□ -1.78
TCF4-268ENST00000629387 Q9BRP9 147 aa3.93□□□□□ -1.78
TCF4-268ENST00000629387 CFAP46Q8IYW2 2715 aa3.93□□□□□ -1.78
TCF4-268ENST00000629387 IGLV4-3A0A075B6K6 122 aa3.93□□□□□ -1.78
TCF4-268ENST00000629387 P0C880 135 aa3.93□□□□□ -1.78
TCF4-268ENST00000629387 C5orf56Q8N8D9 126 aa3.93□□□□□ -1.78
TCF4-268ENST00000629387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.93□□□□□ -1.78
TCF4-268ENST00000629387 RTL8CO15255 209 aa3.93□□□□□ -1.78
TCF4-268ENST00000629387 SPINK13Q1W4C9 94 aa3.93□□□□□ -1.78
TCF4-268ENST00000629387 LINC01558Q9Y6Z2 57 aa3.93□□□□□ -1.78
TCF4-268ENST00000629387 F8P00451 2351 aa3.93□□□□□ -1.78
TCF4-268ENST00000629387 SPENQ96T58 3664 aaKnown RBP3.93□□□□□ -1.78
TCF4-268ENST00000629387 IGHV4OR15-8A0A075B7B6 117 aa3.92□□□□□ -1.78
TCF4-268ENST00000629387 A0A087X002 238 aa3.92□□□□□ -1.78
TCF4-268ENST00000629387 INSP01308 110 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms