RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 DNAH10Q8IVF4 4471 aa4.54□□□□□ -1.68
NPLOC4-221ENST00000625705 MYMXA0A1B0GTQ4 84 aa4.53□□□□□ -1.68
NPLOC4-221ENST00000625705 PHF5AQ7RTV0 110 aaKnown RBP4.53□□□□□ -1.68
NPLOC4-221ENST00000625705 NKAPP1Q8N9T2 125 aa4.53□□□□□ -1.68
NPLOC4-221ENST00000625705 HECTD4Q9Y4D8 3996 aa4.53□□□□□ -1.68
NPLOC4-221ENST00000625705 DNAH17Q9UFH2 4485 aa4.52□□□□□ -1.69
NPLOC4-221ENST00000625705 BIRC6Q9NR09 4857 aa4.52□□□□□ -1.69
NPLOC4-221ENST00000625705 A0A0U1RRA0 63 aa4.52□□□□□ -1.69
NPLOC4-221ENST00000625705 LEPROTO15243 131 aa4.52□□□□□ -1.69
NPLOC4-221ENST00000625705 HERV-K104P63124 156 aa4.52□□□□□ -1.69
NPLOC4-221ENST00000625705 PRR3P79522 188 aaKnown RBP4.52□□□□□ -1.69
NPLOC4-221ENST00000625705 COX17Q14061 63 aa4.52□□□□□ -1.69
NPLOC4-221ENST00000625705 COA6Q5JTJ3 125 aaKnown RBP4.52□□□□□ -1.69
NPLOC4-221ENST00000625705 C9orf129Q5T035 196 aaKnown RBP4.52□□□□□ -1.69
NPLOC4-221ENST00000625705 PET117Q6UWS5 81 aa4.52□□□□□ -1.69
NPLOC4-221ENST00000625705 NDUFA12Q9UI09 145 aa4.52□□□□□ -1.69
NPLOC4-221ENST00000625705 FAT2Q9NYQ8 4349 aa4.52□□□□□ -1.69
NPLOC4-221ENST00000625705 LINC00587B1AMM8 73 aa4.51□□□□□ -1.69
NPLOC4-221ENST00000625705 J3QQQ9 107 aa4.51□□□□□ -1.69
NPLOC4-221ENST00000625705 C3orf79P0CE67 100 aa4.51□□□□□ -1.69
NPLOC4-221ENST00000625705 LBHQ53QV2 105 aaPredicted RBP4.51□□□□□ -1.69
NPLOC4-221ENST00000625705 DNAH2Q9P225 4427 aa4.51□□□□□ -1.69
NPLOC4-221ENST00000625705 RPL24P83731 157 aaKnown RBP4.5□□□□□ -1.69
NPLOC4-221ENST00000625705 C1orf137Q5JT78 98 aa4.5□□□□□ -1.69
NPLOC4-221ENST00000625705 SERTAD4-AS1Q5TG53 156 aa4.5□□□□□ -1.69
NPLOC4-221ENST00000625705 LINC01545Q5VT33 79 aa4.5□□□□□ -1.69
NPLOC4-221ENST00000625705 MRPL55Q7Z7F7 128 aaKnown RBP4.5□□□□□ -1.69
NPLOC4-221ENST00000625705 MIEN1Q9BRT3 115 aa4.5□□□□□ -1.69
NPLOC4-221ENST00000625705 SND1-IT1Q9HBX3 110 aa4.5□□□□□ -1.69
NPLOC4-221ENST00000625705 PKD1P98161 4303 aa4.5□□□□□ -1.69
NPLOC4-221ENST00000625705 GAGE10A6NGK3 116 aa4.49□□□□□ -1.69
NPLOC4-221ENST00000625705 SMIM13P0DJ93 91 aa4.49□□□□□ -1.69
NPLOC4-221ENST00000625705 NMUP48645 174 aa4.49□□□□□ -1.69
NPLOC4-221ENST00000625705 AKR1D1P51857 326 aa4.49□□□□□ -1.69
NPLOC4-221ENST00000625705 PSORS1C2Q9UIG4 136 aa4.49□□□□□ -1.69
NPLOC4-221ENST00000625705 C22orf24Q9Y442 160 aa4.49□□□□□ -1.69
NPLOC4-221ENST00000625705 PKHD1P08F94 4074 aa4.49□□□□□ -1.69
NPLOC4-221ENST00000625705 RPL37AP8A6NKH3 93 aa4.48□□□□□ -1.69
NPLOC4-221ENST00000625705 E9PLD3 99 aa4.48□□□□□ -1.69
NPLOC4-221ENST00000625705 TSPEAR-AS2P59090 65 aa4.48□□□□□ -1.69
NPLOC4-221ENST00000625705 ATOH7Q8N100 152 aa4.48□□□□□ -1.69
NPLOC4-221ENST00000625705 HIST3H2BBQ8N257 126 aa4.48□□□□□ -1.69
NPLOC4-221ENST00000625705 MIR7-3HGQ8N6C7 128 aa4.48□□□□□ -1.69
NPLOC4-221ENST00000625705 TP73-AS1Q9UF72 201 aa4.48□□□□□ -1.69
NPLOC4-221ENST00000625705 ZNF815PA8K554 130 aa4.47□□□□□ -1.69
NPLOC4-221ENST00000625705 HSBP1L1C9JCN9 74 aa4.47□□□□□ -1.69
NPLOC4-221ENST00000625705 HNRNPA3P51991 378 aaKnown RBP4.47□□□□□ -1.69
NPLOC4-221ENST00000625705 KRTAP10-4P60372 401 aaPredicted RBP4.47□□□□□ -1.69
NPLOC4-221ENST00000625705 REG3GQ6UW15 175 aa4.47□□□□□ -1.69
NPLOC4-221ENST00000625705 BOD1L2Q8IYS8 172 aa4.47□□□□□ -1.69
NPLOC4-221ENST00000625705 HIST1H2BLQ99880 126 aa4.47□□□□□ -1.69
NPLOC4-221ENST00000625705 IGKV2-28A0A075B6P5 120 aa4.46□□□□□ -1.7
NPLOC4-221ENST00000625705 NCR3O14931 201 aa4.46□□□□□ -1.7
NPLOC4-221ENST00000625705 IGKV2D-28P01615 120 aa4.46□□□□□ -1.7
NPLOC4-221ENST00000625705 IGLV7-43P04211 117 aa4.46□□□□□ -1.7
NPLOC4-221ENST00000625705 SNRPEP62304 92 aaKnown RBP4.46□□□□□ -1.7
NPLOC4-221ENST00000625705 S100A12P80511 92 aa4.46□□□□□ -1.7
NPLOC4-221ENST00000625705 SPINK6Q6UWN8 80 aa4.46□□□□□ -1.7
NPLOC4-221ENST00000625705 SCGB1D4Q6XE38 83 aa4.46□□□□□ -1.7
NPLOC4-221ENST00000625705 KRTAP7-1Q8IUC3 87 aa4.46□□□□□ -1.7
NPLOC4-221ENST00000625705 DAND5Q8N907 189 aa4.46□□□□□ -1.7
NPLOC4-221ENST00000625705 IGLV5-37A0A075B6J1 123 aa4.45□□□□□ -1.7
NPLOC4-221ENST00000625705 VPREB1P12018 145 aa4.45□□□□□ -1.7
NPLOC4-221ENST00000625705 UBE2AP49459 152 aa4.45□□□□□ -1.7
NPLOC4-221ENST00000625705 NPC2P61916 151 aa4.45□□□□□ -1.7
NPLOC4-221ENST00000625705 DIRC1Q969H9 104 aa4.45□□□□□ -1.7
NPLOC4-221ENST00000625705 LINC00167Q96N53 147 aa4.45□□□□□ -1.7
NPLOC4-221ENST00000625705 KIAA1109Q2LD37 5005 aa4.44□□□□□ -1.7
NPLOC4-221ENST00000625705 A0A0J9YXY3 114 aa4.44□□□□□ -1.7
NPLOC4-221ENST00000625705 M0R378 163 aa4.44□□□□□ -1.7
NPLOC4-221ENST00000625705 SCGB1D1O95968 90 aa4.44□□□□□ -1.7
NPLOC4-221ENST00000625705 OXTP01178 125 aa4.44□□□□□ -1.7
NPLOC4-221ENST00000625705 RPL28P46779 137 aaKnown RBP4.44□□□□□ -1.7
NPLOC4-221ENST00000625705 KRTAP11-1Q8IUC1 163 aa4.44□□□□□ -1.7
NPLOC4-221ENST00000625705 IGKV2D-26A0A0A0MRZ7 120 aa4.43□□□□□ -1.7
NPLOC4-221ENST00000625705 BCE1O60756 84 aa4.43□□□□□ -1.7
NPLOC4-221ENST00000625705 S100A7L2Q5SY68 101 aa4.43□□□□□ -1.7
NPLOC4-221ENST00000625705 DNAH11Q96DT5 4516 aa4.43□□□□□ -1.7
NPLOC4-221ENST00000625705 C5orf52A6NGY3 159 aa4.42□□□□□ -1.7
NPLOC4-221ENST00000625705 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
NPLOC4-221ENST00000625705 TMEM238C9JI98 176 aa4.42□□□□□ -1.7
NPLOC4-221ENST00000625705 FAM19A1Q7Z5A9 133 aa4.42□□□□□ -1.7
NPLOC4-221ENST00000625705 TTTY13Q9BZ97 58 aa4.42□□□□□ -1.7
NPLOC4-221ENST00000625705 SPANXB1Q9NS25 103 aaPredicted RBP4.42□□□□□ -1.7
NPLOC4-221ENST00000625705 DYNC1H1Q14204 4646 aaKnown RBP4.42□□□□□ -1.7
NPLOC4-221ENST00000625705 IGLV1-50A0A075B6I6 118 aa4.41□□□□□ -1.7
NPLOC4-221ENST00000625705 H0Y9J4 135 aa4.41□□□□□ -1.7
NPLOC4-221ENST00000625705 ZNF861PO60384 105 aa4.41□□□□□ -1.7
NPLOC4-221ENST00000625705 TIMM17BO60830 172 aa4.41□□□□□ -1.7
NPLOC4-221ENST00000625705 Q8NDZ9 215 aa4.41□□□□□ -1.7
NPLOC4-221ENST00000625705 COPS9Q8WXC6 57 aa4.41□□□□□ -1.7
NPLOC4-221ENST00000625705 TMEM126AQ9H061 195 aa4.41□□□□□ -1.7
NPLOC4-221ENST00000625705 ETDCA0A1B0GVM5 59 aa4.4□□□□□ -1.71
NPLOC4-221ENST00000625705 PRYO14603 147 aa4.4□□□□□ -1.71
NPLOC4-221ENST00000625705 DDTP30046 118 aa4.4□□□□□ -1.71
NPLOC4-221ENST00000625705 PRLHP81277 87 aa4.4□□□□□ -1.71
NPLOC4-221ENST00000625705 SRSF9Q13242 221 aaKnown RBP eCLIP4.4□□□□□ -1.71
NPLOC4-221ENST00000625705 ADAMTSL4-AS1Q5T5F5 129 aa4.4□□□□□ -1.71
NPLOC4-221ENST00000625705 OR13C6PQ8NH95 151 aa4.4□□□□□ -1.71
NPLOC4-221ENST00000625705 TRBV10-3A0A0K0K1G6 114 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms