RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 PCP2Q8IVA1 136 aa12.57□□□□□ -0.4
R3HCC1-210ENST00000625275 FAT3Q8TDW7 4589 aa12.56□□□□□ -0.4
R3HCC1-210ENST00000625275 A0A087WYN8 130 aa12.56□□□□□ -0.4
R3HCC1-210ENST00000625275 MEIG1Q5JSS6 88 aa12.56□□□□□ -0.4
R3HCC1-210ENST00000625275 LINC00474Q9P2X8 69 aa12.56□□□□□ -0.4
R3HCC1-210ENST00000625275 A0A0J9YXY3 114 aa12.55□□□□□ -0.4
R3HCC1-210ENST00000625275 A0A0U1RRA0 63 aa12.55□□□□□ -0.4
R3HCC1-210ENST00000625275 SMIM13P0DJ93 91 aa12.55□□□□□ -0.4
R3HCC1-210ENST00000625275 DPH3Q96FX2 82 aa12.55□□□□□ -0.4
R3HCC1-210ENST00000625275 VAMP8Q9BV40 100 aa12.55□□□□□ -0.4
R3HCC1-210ENST00000625275 PAM16Q9Y3D7 125 aa12.55□□□□□ -0.4
R3HCC1-210ENST00000625275 LINC00158P58513 81 aa12.54□□□□□ -0.4
R3HCC1-210ENST00000625275 XAGE1AQ9HD64 81 aa12.54□□□□□ -0.4
R3HCC1-210ENST00000625275 C9orf129Q5T035 196 aaKnown RBP12.53□□□□□ -0.4
R3HCC1-210ENST00000625275 SERTAD4-AS1Q5TG53 156 aa12.53□□□□□ -0.4
R3HCC1-210ENST00000625275 LINC00587B1AMM8 73 aa12.53□□□□□ -0.4
R3HCC1-210ENST00000625275 PLAC8Q9NZF1 115 aa12.53□□□□□ -0.4
R3HCC1-210ENST00000625275 SPATA45Q537H7 98 aa12.52□□□□□ -0.41
R3HCC1-210ENST00000625275 SND1-IT1Q9HBX3 110 aa12.51□□□□□ -0.41
R3HCC1-210ENST00000625275 MIR7-3HGQ8N6C7 128 aa12.5□□□□□ -0.41
R3HCC1-210ENST00000625275 FAM168BA1KXE4 195 aa12.49□□□□□ -0.41
R3HCC1-210ENST00000625275 DAND5Q8N907 189 aa12.49□□□□□ -0.41
R3HCC1-210ENST00000625275 TP73-AS1Q9UF72 201 aa12.49□□□□□ -0.41
R3HCC1-210ENST00000625275 A0A1W2PNN7 141 aa12.48□□□□□ -0.41
R3HCC1-210ENST00000625275 ADAMTSL4-AS1Q5T5F5 129 aa12.48□□□□□ -0.41
R3HCC1-210ENST00000625275 SCGB1D4Q6XE38 83 aa12.48□□□□□ -0.41
R3HCC1-210ENST00000625275 LITAFQ99732 161 aa12.48□□□□□ -0.41
R3HCC1-210ENST00000625275 COX8AP10176 69 aa12.47□□□□□ -0.41
R3HCC1-210ENST00000625275 C7orf33Q8WU49 177 aa12.47□□□□□ -0.41
R3HCC1-210ENST00000625275 TIMM17BO60830 172 aa12.46□□□□□ -0.41
R3HCC1-210ENST00000625275 KRTAP7-1Q8IUC3 87 aa12.46□□□□□ -0.41
R3HCC1-210ENST00000625275 BOD1L2Q8IYS8 172 aa12.46□□□□□ -0.41
R3HCC1-210ENST00000625275 C14orf144Q96I85 54 aa12.46□□□□□ -0.42
R3HCC1-210ENST00000625275 SMIM6P0DI80 62 aa12.45□□□□□ -0.42
R3HCC1-210ENST00000625275 FAM19A5Q7Z5A7 132 aaPredicted RBP12.45□□□□□ -0.42
R3HCC1-210ENST00000625275 DLEU1O43261 78 aa12.42□□□□□ -0.42
R3HCC1-210ENST00000625275 S100A12P80511 92 aa12.42□□□□□ -0.42
R3HCC1-210ENST00000625275 TMEM238C9JI98 176 aa12.41□□□□□ -0.42
R3HCC1-210ENST00000625275 MT1HL1P0DM35 61 aa12.41□□□□□ -0.42
R3HCC1-210ENST00000625275 Q8NDZ9 215 aa12.41□□□□□ -0.42
R3HCC1-210ENST00000625275 PLA2G2DQ9UNK4 145 aa12.41□□□□□ -0.42
R3HCC1-210ENST00000625275 EIF4EBP3O60516 100 aaPredicted RBP12.4□□□□□ -0.42
R3HCC1-210ENST00000625275 NPC2P61916 151 aa12.4□□□□□ -0.42
R3HCC1-210ENST00000625275 LOC107984156A0A0G2JMH3 177 aa12.4□□□□□ -0.43
R3HCC1-210ENST00000625275 SOSTDC1Q6X4U4 206 aa12.4□□□□□ -0.43
R3HCC1-210ENST00000625275 ARL17AQ8IVW1 177 aa12.4□□□□□ -0.43
R3HCC1-210ENST00000625275 PRR3P79522 188 aaKnown RBP12.39□□□□□ -0.43
R3HCC1-210ENST00000625275 SLC25A34Q6PIV7 304 aa12.39□□□□□ -0.43
R3HCC1-210ENST00000625275 SPANXDQ9BXN6 97 aa12.39□□□□□ -0.43
R3HCC1-210ENST00000625275 SPANXCQ9NY87 97 aa12.39□□□□□ -0.43
R3HCC1-210ENST00000625275 M0QXV9 152 aa12.38□□□□□ -0.43
R3HCC1-210ENST00000625275 VPREB1P12018 145 aa12.38□□□□□ -0.43
R3HCC1-210ENST00000625275 LINC00308Q8TCZ7 52 aa12.38□□□□□ -0.43
R3HCC1-210ENST00000625275 MIEN1Q9BRT3 115 aa12.38□□□□□ -0.43
R3HCC1-210ENST00000625275 PHF5AQ7RTV0 110 aaKnown RBP12.37□□□□□ -0.43
R3HCC1-210ENST00000625275 C22orf24Q9Y442 160 aa12.37□□□□□ -0.43
R3HCC1-210ENST00000625275 HMCN2Q8NDA2 5059 aa12.37□□□□□ -0.43
R3HCC1-210ENST00000625275 IGLV5-37A0A075B6J1 123 aa12.36□□□□□ -0.43
R3HCC1-210ENST00000625275 RPL24P83731 157 aaKnown RBP12.35□□□□□ -0.43
R3HCC1-210ENST00000625275 SPANXB1Q9NS25 103 aaPredicted RBP12.35□□□□□ -0.43
R3HCC1-210ENST00000625275 Q6ZVH6 145 aa12.34□□□□□ -0.43
R3HCC1-210ENST00000625275 NKAPP1Q8N9T2 125 aa12.34□□□□□ -0.43
R3HCC1-210ENST00000625275 C2orf91Q6ZV80 131 aa12.34□□□□□ -0.43
R3HCC1-210ENST00000625275 MRPL55Q7Z7F7 128 aaKnown RBP12.33□□□□□ -0.44
R3HCC1-210ENST00000625275 SRSF9Q13242 221 aaKnown RBP eCLIP12.32□□□□□ -0.44
R3HCC1-210ENST00000625275 C12orf57Q99622 126 aa12.32□□□□□ -0.44
R3HCC1-210ENST00000625275 HIGD1BQ9P298 99 aa12.32□□□□□ -0.44
R3HCC1-210ENST00000625275 IFITM1P13164 125 aa12.31□□□□□ -0.44
R3HCC1-210ENST00000625275 GAGE10A6NGK3 116 aa12.3□□□□□ -0.44
R3HCC1-210ENST00000625275 NCR3O14931 201 aa12.3□□□□□ -0.44
R3HCC1-210ENST00000625275 NDUFC2O95298 119 aa12.3□□□□□ -0.44
R3HCC1-210ENST00000625275 MUSTN1Q8IVN3 82 aa12.3□□□□□ -0.44
R3HCC1-210ENST00000625275 LBHQ53QV2 105 aaPredicted RBP12.29□□□□□ -0.44
R3HCC1-210ENST00000625275 KRTAP11-1Q8IUC1 163 aa12.29□□□□□ -0.44
R3HCC1-210ENST00000625275 COPS9Q8WXC6 57 aa12.29□□□□□ -0.44
R3HCC1-210ENST00000625275 LINC00167Q96N53 147 aa12.29□□□□□ -0.44
R3HCC1-210ENST00000625275 PPDPFQ9H3Y8 114 aa12.29□□□□□ -0.44
R3HCC1-210ENST00000625275 UQCR10Q9UDW1 63 aa12.29□□□□□ -0.44
R3HCC1-210ENST00000625275 PRO1933Q9H354 126 aa12.28□□□□□ -0.44
R3HCC1-210ENST00000625275 UBE2BP63146 152 aa12.27□□□□□ -0.44
R3HCC1-210ENST00000625275 HIST1H4GQ99525 98 aa12.27□□□□□ -0.44
R3HCC1-210ENST00000625275 RPL37AP8A6NKH3 93 aa12.27□□□□□ -0.45
R3HCC1-210ENST00000625275 M0R378 163 aa12.27□□□□□ -0.45
R3HCC1-210ENST00000625275 LINC01600Q96MT4 127 aa12.27□□□□□ -0.45
R3HCC1-210ENST00000625275 SPINK6Q6UWN8 80 aa12.26□□□□□ -0.45
R3HCC1-210ENST00000625275 TRBV10-2A0A0K0K1G8 114 aa12.25□□□□□ -0.45
R3HCC1-210ENST00000625275 LINC00518Q8N0U6 118 aa12.25□□□□□ -0.45
R3HCC1-210ENST00000625275 IGKV2-28A0A075B6P5 120 aa12.24□□□□□ -0.45
R3HCC1-210ENST00000625275 IGKV2D-28P01615 120 aa12.24□□□□□ -0.45
R3HCC1-210ENST00000625275 PSORS1C2Q9UIG4 136 aa12.23□□□□□ -0.45
R3HCC1-210ENST00000625275 TNXBP22105 4242 aa12.22□□□□□ -0.45
R3HCC1-210ENST00000625275 IGLV1-50A0A075B6I6 118 aa12.22□□□□□ -0.45
R3HCC1-210ENST00000625275 REG3GQ6UW15 175 aa12.22□□□□□ -0.45
R3HCC1-210ENST00000625275 TRBV10-3A0A0K0K1G6 114 aa12.21□□□□□ -0.46
R3HCC1-210ENST00000625275 A4D1N5 150 aa12.21□□□□□ -0.46
R3HCC1-210ENST00000625275 TAL2Q16559 108 aa12.2□□□□□ -0.46
R3HCC1-210ENST00000625275 LINC00337Q8N6G1 96 aa12.2□□□□□ -0.46
R3HCC1-210ENST00000625275 IGLV6-57P01721 117 aa12.18□□□□□ -0.46
R3HCC1-210ENST00000625275 DDTP30046 118 aa12.18□□□□□ -0.46
R3HCC1-210ENST00000625275 S100A7L2Q5SY68 101 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms