RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 TMEM223A0PJW6 202 aa6.02□□□□□ -1.45
LINC01560-202ENST00000624822 DPM2O94777 84 aa6.02□□□□□ -1.45
LINC01560-202ENST00000624822 IGKCP01834 107 aa6.02□□□□□ -1.45
LINC01560-202ENST00000624822 INAFM2P0DMQ5 153 aa6.02□□□□□ -1.45
LINC01560-202ENST00000624822 PLNP26678 52 aa6.02□□□□□ -1.45
LINC01560-202ENST00000624822 PYY3Q5JQD4 70 aa6.02□□□□□ -1.45
LINC01560-202ENST00000624822 FAM19A5Q7Z5A7 132 aaPredicted RBP6.02□□□□□ -1.45
LINC01560-202ENST00000624822 PCLOQ9Y6V0 5065 aa6.02□□□□□ -1.45
LINC01560-202ENST00000624822 PFN2P35080 140 aa6.01□□□□□ -1.45
LINC01560-202ENST00000624822 ZNF625Q96I27 306 aaPredicted RBP6.01□□□□□ -1.45
LINC01560-202ENST00000624822 FAM168BA1KXE4 195 aa6□□□□□ -1.45
LINC01560-202ENST00000624822 PCP4L1A6NKN8 68 aa6□□□□□ -1.45
LINC01560-202ENST00000624822 SYS1-DBNDD2H3BUS1 97 aa6□□□□□ -1.45
LINC01560-202ENST00000624822 HERVK_113P61574 105 aa6□□□□□ -1.45
LINC01560-202ENST00000624822 JOSD1Q15040 202 aaPredicted RBP6□□□□□ -1.45
LINC01560-202ENST00000624822 XAGE1AQ9HD64 81 aa6□□□□□ -1.45
LINC01560-202ENST00000624822 FAT1Q14517 4588 aa5.99□□□□□ -1.45
LINC01560-202ENST00000624822 SCGB1D1O95968 90 aa5.99□□□□□ -1.45
LINC01560-202ENST00000624822 KRTDAPP60985 99 aa5.99□□□□□ -1.45
LINC01560-202ENST00000624822 C9orf129Q5T035 196 aaKnown RBP5.99□□□□□ -1.45
LINC01560-202ENST00000624822 SFTA2Q6UW10 78 aa5.99□□□□□ -1.45
LINC01560-202ENST00000624822 PHF5AQ7RTV0 110 aaKnown RBP5.99□□□□□ -1.45
LINC01560-202ENST00000624822 ERG28Q9UKR5 140 aa5.99□□□□□ -1.45
LINC01560-202ENST00000624822 M0QXV9 152 aa5.98□□□□□ -1.45
LINC01560-202ENST00000624822 C3orf79P0CE67 100 aa5.98□□□□□ -1.45
LINC01560-202ENST00000624822 MEIG1Q5JSS6 88 aa5.98□□□□□ -1.45
LINC01560-202ENST00000624822 PET117Q6UWS5 81 aa5.98□□□□□ -1.45
LINC01560-202ENST00000624822 A0A0U1RRA0 63 aa5.97□□□□□ -1.45
LINC01560-202ENST00000624822 LEPROTO15243 131 aa5.97□□□□□ -1.45
LINC01560-202ENST00000624822 LGALS3P17931 250 aaKnown RBP5.97□□□□□ -1.45
LINC01560-202ENST00000624822 UBE2BP63146 152 aa5.97□□□□□ -1.45
LINC01560-202ENST00000624822 PLEKHB2Q96CS7 222 aa5.97□□□□□ -1.45
LINC01560-202ENST00000624822 NDUFA12Q9UI09 145 aa5.97□□□□□ -1.45
LINC01560-202ENST00000624822 MYMXA0A1B0GTQ4 84 aa5.96□□□□□ -1.46
LINC01560-202ENST00000624822 C20orf202A1L168 122 aa5.96□□□□□ -1.46
LINC01560-202ENST00000624822 LINC00158P58513 81 aa5.96□□□□□ -1.46
LINC01560-202ENST00000624822 S100A12P80511 92 aa5.96□□□□□ -1.46
LINC01560-202ENST00000624822 COX17Q14061 63 aa5.96□□□□□ -1.46
LINC01560-202ENST00000624822 LINC01545Q5VT33 79 aa5.96□□□□□ -1.46
LINC01560-202ENST00000624822 CDIP1Q9H305 208 aa5.96□□□□□ -1.46
LINC01560-202ENST00000624822 ABCA13Q86UQ4 5058 aa5.96□□□□□ -1.46
LINC01560-202ENST00000624822 J3QQQ9 107 aa5.95□□□□□ -1.46
LINC01560-202ENST00000624822 TSPEAR-AS2P59090 65 aa5.95□□□□□ -1.46
LINC01560-202ENST00000624822 KRTAP10-4P60372 401 aaPredicted RBP5.95□□□□□ -1.46
LINC01560-202ENST00000624822 HERV-K104P63124 156 aa5.95□□□□□ -1.46
LINC01560-202ENST00000624822 PRR3P79522 188 aaKnown RBP5.95□□□□□ -1.46
LINC01560-202ENST00000624822 SERTAD4-AS1Q5TG53 156 aa5.95□□□□□ -1.46
LINC01560-202ENST00000624822 SMIM13P0DJ93 91 aa5.94□□□□□ -1.46
LINC01560-202ENST00000624822 C1orf137Q5JT78 98 aa5.94□□□□□ -1.46
LINC01560-202ENST00000624822 KRTAP7-1Q8IUC3 87 aa5.94□□□□□ -1.46
LINC01560-202ENST00000624822 NKAPP1Q8N9T2 125 aa5.94□□□□□ -1.46
LINC01560-202ENST00000624822 SND1-IT1Q9HBX3 110 aa5.94□□□□□ -1.46
LINC01560-202ENST00000624822 C22orf24Q9Y442 160 aa5.94□□□□□ -1.46
LINC01560-202ENST00000624822 VPS13BQ7Z7G8 4022 aa5.93□□□□□ -1.46
LINC01560-202ENST00000624822 LINC00587B1AMM8 73 aa5.93□□□□□ -1.46
LINC01560-202ENST00000624822 E9PLD3 99 aa5.93□□□□□ -1.46
LINC01560-202ENST00000624822 NMUP48645 174 aa5.93□□□□□ -1.46
LINC01560-202ENST00000624822 HNRNPA3P51991 378 aaKnown RBP5.93□□□□□ -1.46
LINC01560-202ENST00000624822 PRO1933Q9H354 126 aa5.93□□□□□ -1.46
LINC01560-202ENST00000624822 PSORS1C2Q9UIG4 136 aa5.93□□□□□ -1.46
LINC01560-202ENST00000624822 LBHQ53QV2 105 aaPredicted RBP5.92□□□□□ -1.46
LINC01560-202ENST00000624822 MRPL55Q7Z7F7 128 aaKnown RBP5.92□□□□□ -1.46
LINC01560-202ENST00000624822 ATOH7Q8N100 152 aa5.92□□□□□ -1.46
LINC01560-202ENST00000624822 SRRM2Q9UQ35 2752 aaKnown RBP5.92□□□□□ -1.46
LINC01560-202ENST00000624822 GAGE10A6NGK3 116 aa5.91□□□□□ -1.46
LINC01560-202ENST00000624822 TSTD3H0UI37 97 aa5.91□□□□□ -1.46
LINC01560-202ENST00000624822 RPL24P83731 157 aaKnown RBP5.91□□□□□ -1.46
LINC01560-202ENST00000624822 MIR7-3HGQ8N6C7 128 aa5.91□□□□□ -1.46
LINC01560-202ENST00000624822 RPL37AP8A6NKH3 93 aa5.9□□□□□ -1.46
LINC01560-202ENST00000624822 KRTAP11-1Q8IUC1 163 aa5.9□□□□□ -1.46
LINC01560-202ENST00000624822 DAND5Q8N907 189 aa5.9□□□□□ -1.46
LINC01560-202ENST00000624822 VAMP8Q9BV40 100 aa5.9□□□□□ -1.46
LINC01560-202ENST00000624822 TP73-AS1Q9UF72 201 aa5.9□□□□□ -1.46
LINC01560-202ENST00000624822 LINC00167Q96N53 147 aa5.89□□□□□ -1.47
LINC01560-202ENST00000624822 MIEN1Q9BRT3 115 aa5.89□□□□□ -1.47
LINC01560-202ENST00000624822 IGLV5-37A0A075B6J1 123 aa5.88□□□□□ -1.47
LINC01560-202ENST00000624822 IGKV2-28A0A075B6P5 120 aa5.88□□□□□ -1.47
LINC01560-202ENST00000624822 IGKV2D-26A0A0A0MRZ7 120 aa5.88□□□□□ -1.47
LINC01560-202ENST00000624822 A0A0J9YXY3 114 aa5.88□□□□□ -1.47
LINC01560-202ENST00000624822 ZNF815PA8K554 130 aa5.88□□□□□ -1.47
LINC01560-202ENST00000624822 IGKV2D-28P01615 120 aa5.88□□□□□ -1.47
LINC01560-202ENST00000624822 VPREB1P12018 145 aa5.88□□□□□ -1.47
LINC01560-202ENST00000624822 NPC2P61916 151 aa5.88□□□□□ -1.47
LINC01560-202ENST00000624822 BOD1L2Q8IYS8 172 aa5.88□□□□□ -1.47
LINC01560-202ENST00000624822 PAM16Q9Y3D7 125 aa5.88□□□□□ -1.47
LINC01560-202ENST00000624822 FLG2Q5D862 2391 aaPredicted RBP5.87□□□□□ -1.47
LINC01560-202ENST00000624822 IGLV7-43P04211 117 aa5.87□□□□□ -1.47
LINC01560-202ENST00000624822 SPATA45Q537H7 98 aa5.87□□□□□ -1.47
LINC01560-202ENST00000624822 SPINK6Q6UWN8 80 aa5.87□□□□□ -1.47
LINC01560-202ENST00000624822 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
LINC01560-202ENST00000624822 TTTY13Q9BZ97 58 aa5.87□□□□□ -1.47
LINC01560-202ENST00000624822 HSBP1L1C9JCN9 74 aa5.86□□□□□ -1.47
LINC01560-202ENST00000624822 NCR3O14931 201 aa5.86□□□□□ -1.47
LINC01560-202ENST00000624822 DDTP30046 118 aa5.86□□□□□ -1.47
LINC01560-202ENST00000624822 SCGB1D4Q6XE38 83 aa5.86□□□□□ -1.47
LINC01560-202ENST00000624822 Q8NDZ9 215 aa5.86□□□□□ -1.47
LINC01560-202ENST00000624822 REG3GQ6UW15 175 aa5.85□□□□□ -1.47
LINC01560-202ENST00000624822 PKHD1L1Q86WI1 4243 aa5.85□□□□□ -1.47
LINC01560-202ENST00000624822 IGLV1-50A0A075B6I6 118 aa5.84□□□□□ -1.47
LINC01560-202ENST00000624822 KRTAP29-1A8MX34 341 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms