RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.03□□□□□ -1.76
BRCC3-209ENST00000620502 PHF5AQ7RTV0 110 aaKnown RBP4.03□□□□□ -1.76
BRCC3-209ENST00000620502 KRTAP11-1Q8IUC1 163 aa4.03□□□□□ -1.76
BRCC3-209ENST00000620502 HIST1H2BHQ93079 126 aa4.03□□□□□ -1.76
BRCC3-209ENST00000620502 HIST1H2BNQ99877 126 aa4.03□□□□□ -1.76
BRCC3-209ENST00000620502 HIST1H2BMQ99879 126 aa4.03□□□□□ -1.76
BRCC3-209ENST00000620502 SRRM2Q9UQ35 2752 aaKnown RBP4.02□□□□□ -1.77
BRCC3-209ENST00000620502 TMEM223A0PJW6 202 aa4.02□□□□□ -1.77
BRCC3-209ENST00000620502 LEPROTL1O95214 131 aa4.02□□□□□ -1.77
BRCC3-209ENST00000620502 SRSF9Q13242 221 aaKnown RBP eCLIP4.02□□□□□ -1.77
BRCC3-209ENST00000620502 TMEM170BQ5T4T1 132 aa4.02□□□□□ -1.77
BRCC3-209ENST00000620502 FAM19A5Q7Z5A7 132 aaPredicted RBP4.02□□□□□ -1.77
BRCC3-209ENST00000620502 FABP4P15090 132 aa4.01□□□□□ -1.77
BRCC3-209ENST00000620502 SERTAD4-AS1Q5TG53 156 aa4.01□□□□□ -1.77
BRCC3-209ENST00000620502 ZNF625Q96I27 306 aaPredicted RBP4.01□□□□□ -1.77
BRCC3-209ENST00000620502 XAGE1AQ9HD64 81 aa4.01□□□□□ -1.77
BRCC3-209ENST00000620502 PSORS1C2Q9UIG4 136 aa4.01□□□□□ -1.77
BRCC3-209ENST00000620502 H0Y8G0 127 aa4□□□□□ -1.77
BRCC3-209ENST00000620502 M0QXV9 152 aa4□□□□□ -1.77
BRCC3-209ENST00000620502 OXTP01178 125 aa4□□□□□ -1.77
BRCC3-209ENST00000620502 HSPB8Q9UJY1 196 aa4□□□□□ -1.77
BRCC3-209ENST00000620502 S100A1P23297 94 aa3.99□□□□□ -1.77
BRCC3-209ENST00000620502 PFN2P35080 140 aa3.99□□□□□ -1.77
BRCC3-209ENST00000620502 COA6Q5JTJ3 125 aaKnown RBP3.99□□□□□ -1.77
BRCC3-209ENST00000620502 SPINK6Q6UWN8 80 aa3.99□□□□□ -1.77
BRCC3-209ENST00000620502 PMCHL2Q9BQD1 86 aa3.99□□□□□ -1.77
BRCC3-209ENST00000620502 ERG28Q9UKR5 140 aa3.99□□□□□ -1.77
BRCC3-209ENST00000620502 C22orf24Q9Y442 160 aa3.99□□□□□ -1.77
BRCC3-209ENST00000620502 PKHD1L1Q86WI1 4243 aa3.99□□□□□ -1.77
BRCC3-209ENST00000620502 FLG2Q5D862 2391 aaPredicted RBP3.98□□□□□ -1.77
BRCC3-209ENST00000620502 IGLV5-37A0A075B6J1 123 aa3.98□□□□□ -1.77
BRCC3-209ENST00000620502 PCP4P48539 62 aa3.98□□□□□ -1.77
BRCC3-209ENST00000620502 COX17Q14061 63 aa3.98□□□□□ -1.77
BRCC3-209ENST00000620502 C1orf137Q5JT78 98 aa3.98□□□□□ -1.77
BRCC3-209ENST00000620502 MAP1LC3CQ9BXW4 147 aa3.98□□□□□ -1.77
BRCC3-209ENST00000620502 SND1-IT1Q9HBX3 110 aa3.98□□□□□ -1.77
BRCC3-209ENST00000620502 SYS1-DBNDD2H3BUS1 97 aa3.97□□□□□ -1.77
BRCC3-209ENST00000620502 ATP6V1G1O75348 118 aa3.97□□□□□ -1.77
BRCC3-209ENST00000620502 DPM2O94777 84 aa3.97□□□□□ -1.77
BRCC3-209ENST00000620502 IGKCP01834 107 aa3.97□□□□□ -1.77
BRCC3-209ENST00000620502 IGLV7-43P04211 117 aa3.97□□□□□ -1.77
BRCC3-209ENST00000620502 MT1HL1P0DM35 61 aa3.97□□□□□ -1.77
BRCC3-209ENST00000620502 PLNP26678 52 aa3.97□□□□□ -1.77
BRCC3-209ENST00000620502 TSPEAR-AS2P59090 65 aa3.97□□□□□ -1.77
BRCC3-209ENST00000620502 SFTA2Q6UW10 78 aa3.97□□□□□ -1.77
BRCC3-209ENST00000620502 TP73-AS1Q9UF72 201 aa3.97□□□□□ -1.77
BRCC3-209ENST00000620502 MYCBP2O75592 4640 aa3.97□□□□□ -1.77
BRCC3-209ENST00000620502 LEPROTO15243 131 aa3.96□□□□□ -1.78
BRCC3-209ENST00000620502 UBE2BP63146 152 aa3.96□□□□□ -1.78
BRCC3-209ENST00000620502 LBHQ53QV2 105 aaPredicted RBP3.96□□□□□ -1.78
BRCC3-209ENST00000620502 MRPL55Q7Z7F7 128 aaKnown RBP3.96□□□□□ -1.78
BRCC3-209ENST00000620502 Q8NDZ9 215 aa3.96□□□□□ -1.78
BRCC3-209ENST00000620502 LINC01600Q96MT4 127 aa3.96□□□□□ -1.78
BRCC3-209ENST00000620502 LINC00167Q96N53 147 aa3.96□□□□□ -1.78
BRCC3-209ENST00000620502 LRP1Q07954 4544 aaKnown RBP3.95□□□□□ -1.78
BRCC3-209ENST00000620502 A0A0U1RRA0 63 aa3.95□□□□□ -1.78
BRCC3-209ENST00000620502 RPL37AP8A6NKH3 93 aa3.95□□□□□ -1.78
BRCC3-209ENST00000620502 C3orf79P0CE67 100 aa3.95□□□□□ -1.78
BRCC3-209ENST00000620502 SMIM13P0DJ93 91 aa3.95□□□□□ -1.78
BRCC3-209ENST00000620502 VPREB1P12018 145 aa3.95□□□□□ -1.78
BRCC3-209ENST00000620502 LINC00158P58513 81 aa3.95□□□□□ -1.78
BRCC3-209ENST00000620502 HERV-K104P63124 156 aa3.95□□□□□ -1.78
BRCC3-209ENST00000620502 LINC01545Q5VT33 79 aa3.95□□□□□ -1.78
BRCC3-209ENST00000620502 PET117Q6UWS5 81 aa3.95□□□□□ -1.78
BRCC3-209ENST00000620502 PLEKHB2Q96CS7 222 aa3.95□□□□□ -1.78
BRCC3-209ENST00000620502 NDUFA12Q9UI09 145 aa3.95□□□□□ -1.78
BRCC3-209ENST00000620502 MYMXA0A1B0GTQ4 84 aa3.94□□□□□ -1.78
BRCC3-209ENST00000620502 GAGE10A6NGK3 116 aa3.94□□□□□ -1.78
BRCC3-209ENST00000620502 E9PLD3 99 aa3.94□□□□□ -1.78
BRCC3-209ENST00000620502 J3QQQ9 107 aa3.94□□□□□ -1.78
BRCC3-209ENST00000620502 KRTAP10-8P60410 259 aa3.94□□□□□ -1.78
BRCC3-209ENST00000620502 FAT3Q8TDW7 4589 aa3.94□□□□□ -1.78
BRCC3-209ENST00000620502 IGLV1-50A0A075B6I6 118 aa3.93□□□□□ -1.78
BRCC3-209ENST00000620502 IGKV2D-30A0A075B6S6 120 aa3.93□□□□□ -1.78
BRCC3-209ENST00000620502 H0Y9J4 135 aa3.93□□□□□ -1.78
BRCC3-209ENST00000620502 ZNF861PO60384 105 aa3.93□□□□□ -1.78
BRCC3-209ENST00000620502 HERVK_113P61574 105 aa3.93□□□□□ -1.78
BRCC3-209ENST00000620502 RPL24P83731 157 aaKnown RBP3.93□□□□□ -1.78
BRCC3-209ENST00000620502 MEIG1Q5JSS6 88 aa3.93□□□□□ -1.78
BRCC3-209ENST00000620502 REG3GQ6UW15 175 aa3.93□□□□□ -1.78
BRCC3-209ENST00000620502 MIR7-3HGQ8N6C7 128 aa3.93□□□□□ -1.78
BRCC3-209ENST00000620502 NKAPP1Q8N9T2 125 aa3.93□□□□□ -1.78
BRCC3-209ENST00000620502 DIRC1Q969H9 104 aa3.93□□□□□ -1.78
BRCC3-209ENST00000620502 HERC1Q15751 4861 aa3.92□□□□□ -1.78
BRCC3-209ENST00000620502 IGKV2-28A0A075B6P5 120 aa3.92□□□□□ -1.78
BRCC3-209ENST00000620502 LOC107984156A0A0G2JMH3 177 aa3.92□□□□□ -1.78
BRCC3-209ENST00000620502 LINC00587B1AMM8 73 aa3.92□□□□□ -1.78
BRCC3-209ENST00000620502 BCE1O60756 84 aa3.92□□□□□ -1.78
BRCC3-209ENST00000620502 IGKV2D-28P01615 120 aa3.92□□□□□ -1.78
BRCC3-209ENST00000620502 KRTAP1-4P0C5Y4 121 aa3.92□□□□□ -1.78
BRCC3-209ENST00000620502 LGALS3P17931 250 aaKnown RBP3.92□□□□□ -1.78
BRCC3-209ENST00000620502 NMUP48645 174 aa3.92□□□□□ -1.78
BRCC3-209ENST00000620502 KRTDAPP60985 99 aa3.92□□□□□ -1.78
BRCC3-209ENST00000620502 ARL17AQ8IVW1 177 aa3.92□□□□□ -1.78
BRCC3-209ENST00000620502 IGKV2D-26A0A0A0MRZ7 120 aa3.91□□□□□ -1.78
BRCC3-209ENST00000620502 A0A0J9YXY3 114 aa3.91□□□□□ -1.78
BRCC3-209ENST00000620502 ADAMTSL4-AS1Q5T5F5 129 aa3.91□□□□□ -1.78
BRCC3-209ENST00000620502 KRTAP13-1Q8IUC0 172 aa3.91□□□□□ -1.78
BRCC3-209ENST00000620502 BOD1L2Q8IYS8 172 aa3.91□□□□□ -1.78
BRCC3-209ENST00000620502 HIST3H2BBQ8N257 126 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms