RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 PMCHL2Q9BQD1 86 aa7.54□□□□□ -1.2
HLA-F-230ENST00000606273 IGLV5-39A0A0G2JS06 123 aa7.53□□□□□ -1.2
HLA-F-230ENST00000606273 F8VRH5 84 aa7.53□□□□□ -1.2
HLA-F-230ENST00000606273 COX7B2Q8TF08 81 aa7.53□□□□□ -1.2
HLA-F-230ENST00000606273 HSPB8Q9UJY1 196 aa7.53□□□□□ -1.2
HLA-F-230ENST00000606273 A0A087WYN8 130 aa7.52□□□□□ -1.21
HLA-F-230ENST00000606273 PRSS2P07478 247 aa7.52□□□□□ -1.21
HLA-F-230ENST00000606273 C6orf226Q5I0X4 101 aa7.52□□□□□ -1.21
HLA-F-230ENST00000606273 TMEM170BQ5T4T1 132 aa7.52□□□□□ -1.21
HLA-F-230ENST00000606273 LOC107984640A0A0U1RRK4 108 aa7.51□□□□□ -1.21
HLA-F-230ENST00000606273 TMEM223A0PJW6 202 aa7.51□□□□□ -1.21
HLA-F-230ENST00000606273 F8WDY8 70 aa7.51□□□□□ -1.21
HLA-F-230ENST00000606273 H3BRM9 83 aa7.51□□□□□ -1.21
HLA-F-230ENST00000606273 GAGE2BQ13066 116 aa7.51□□□□□ -1.21
HLA-F-230ENST00000606273 MAJINQ3KP22 176 aa7.51□□□□□ -1.21
HLA-F-230ENST00000606273 Q6ZRP5 223 aa7.51□□□□□ -1.21
HLA-F-230ENST00000606273 CKS1BP61024 79 aa7.5□□□□□ -1.21
HLA-F-230ENST00000606273 RPL18AQ02543 176 aaKnown RBP7.5□□□□□ -1.21
HLA-F-230ENST00000606273 REG3GQ6UW15 175 aa7.5□□□□□ -1.21
HLA-F-230ENST00000606273 FSIP2Q5CZC0 6907 aa7.5□□□□□ -1.21
HLA-F-230ENST00000606273 TRBV30A0A0K0K1B3 111 aa7.49□□□□□ -1.21
HLA-F-230ENST00000606273 SYS1-DBNDD2H3BUS1 97 aa7.49□□□□□ -1.21
HLA-F-230ENST00000606273 SPINK6Q6UWN8 80 aa7.49□□□□□ -1.21
HLA-F-230ENST00000606273 MAP1LC3CQ9BXW4 147 aa7.49□□□□□ -1.21
HLA-F-230ENST00000606273 A0A1W2PNN7 141 aa7.48□□□□□ -1.21
HLA-F-230ENST00000606273 TLX1NBP0CAT3 122 aa7.48□□□□□ -1.21
HLA-F-230ENST00000606273 C3orf79P0CE67 100 aa7.48□□□□□ -1.21
HLA-F-230ENST00000606273 STPG4Q8N801 248 aa7.48□□□□□ -1.21
HLA-F-230ENST00000606273 C7orf33Q8WU49 177 aa7.48□□□□□ -1.21
HLA-F-230ENST00000606273 PLAC8Q9NZF1 115 aa7.48□□□□□ -1.21
HLA-F-230ENST00000606273 FAM168BA1KXE4 195 aa7.47□□□□□ -1.21
HLA-F-230ENST00000606273 PRR3P79522 188 aaKnown RBP7.47□□□□□ -1.21
HLA-F-230ENST00000606273 GAGE2EQ4V326 116 aa7.47□□□□□ -1.21
HLA-F-230ENST00000606273 KRTAP7-1Q8IUC3 87 aa7.47□□□□□ -1.21
HLA-F-230ENST00000606273 HIST3H2BBQ8N257 126 aa7.47□□□□□ -1.21
HLA-F-230ENST00000606273 GAGE2DQ9UEU5 116 aa7.47□□□□□ -1.21
HLA-F-230ENST00000606273 CRCT1Q9UGL9 99 aa7.47□□□□□ -1.21
HLA-F-230ENST00000606273 NDUFC2-KCTD14E9PQ53 114 aa7.46□□□□□ -1.22
HLA-F-230ENST00000606273 DPM2O94777 84 aa7.46□□□□□ -1.22
HLA-F-230ENST00000606273 IGKCP01834 107 aa7.46□□□□□ -1.22
HLA-F-230ENST00000606273 CXCL5P42830 114 aa7.46□□□□□ -1.22
HLA-F-230ENST00000606273 TSPEAR-AS2P59090 65 aa7.46□□□□□ -1.22
HLA-F-230ENST00000606273 SRSF9Q13242 221 aaKnown RBP eCLIP7.46□□□□□ -1.22
HLA-F-230ENST00000606273 C9orf129Q5T035 196 aaKnown RBP7.46□□□□□ -1.22
HLA-F-230ENST00000606273 KRTDAPP60985 99 aa7.45□□□□□ -1.22
HLA-F-230ENST00000606273 LINC01545Q5VT33 79 aa7.45□□□□□ -1.22
HLA-F-230ENST00000606273 ZNF625Q96I27 306 aaPredicted RBP7.45□□□□□ -1.22
HLA-F-230ENST00000606273 PLNP26678 52 aa7.44□□□□□ -1.22
HLA-F-230ENST00000606273 SNRPEP62304 92 aaKnown RBP7.44□□□□□ -1.22
HLA-F-230ENST00000606273 PET117Q6UWS5 81 aa7.44□□□□□ -1.22
HLA-F-230ENST00000606273 HIST1H2BLQ99880 126 aa7.44□□□□□ -1.22
HLA-F-230ENST00000606273 XAGE1AQ9HD64 81 aa7.44□□□□□ -1.22
HLA-F-230ENST00000606273 LINC00474Q9P2X8 69 aa7.44□□□□□ -1.22
HLA-F-230ENST00000606273 PKIGQ9Y2B9 76 aa7.44□□□□□ -1.22
HLA-F-230ENST00000606273 C5orf52A6NGY3 159 aa7.42□□□□□ -1.22
HLA-F-230ENST00000606273 LEPROTO15243 131 aa7.41□□□□□ -1.22
HLA-F-230ENST00000606273 PFN2P35080 140 aa7.41□□□□□ -1.22
HLA-F-230ENST00000606273 PHF5AQ7RTV0 110 aaKnown RBP7.41□□□□□ -1.22
HLA-F-230ENST00000606273 FAM19A5Q7Z5A7 132 aaPredicted RBP7.41□□□□□ -1.22
HLA-F-230ENST00000606273 KRTAP11-1Q8IUC1 163 aa7.41□□□□□ -1.22
HLA-F-230ENST00000606273 ERG28Q9UKR5 140 aa7.41□□□□□ -1.22
HLA-F-230ENST00000606273 S100A6P06703 90 aa7.4□□□□□ -1.22
HLA-F-230ENST00000606273 IGKV2D-26A0A0A0MRZ7 120 aa7.39□□□□□ -1.23
HLA-F-230ENST00000606273 A0A0U1RRA0 63 aa7.39□□□□□ -1.23
HLA-F-230ENST00000606273 J3QQQ9 107 aa7.39□□□□□ -1.23
HLA-F-230ENST00000606273 S100A2P29034 98 aa7.39□□□□□ -1.23
HLA-F-230ENST00000606273 ATOH7Q8N100 152 aa7.39□□□□□ -1.23
HLA-F-230ENST00000606273 NDUFA12Q9UI09 145 aa7.39□□□□□ -1.23
HLA-F-230ENST00000606273 E9PLD3 99 aa7.38□□□□□ -1.23
HLA-F-230ENST00000606273 Q8NDZ9 215 aa7.38□□□□□ -1.23
HLA-F-230ENST00000606273 PLEKHB2Q96CS7 222 aa7.38□□□□□ -1.23
HLA-F-230ENST00000606273 SMIM13P0DJ93 91 aa7.37□□□□□ -1.23
HLA-F-230ENST00000606273 HERVK_113P61574 105 aa7.37□□□□□ -1.23
HLA-F-230ENST00000606273 TTTY13Q9BZ97 58 aa7.37□□□□□ -1.23
HLA-F-230ENST00000606273 SND1-IT1Q9HBX3 110 aa7.37□□□□□ -1.23
HLA-F-230ENST00000606273 M0QXV9 152 aa7.36□□□□□ -1.23
HLA-F-230ENST00000606273 LGALS3P17931 250 aaKnown RBP7.35□□□□□ -1.23
HLA-F-230ENST00000606273 LINC00158P58513 81 aa7.35□□□□□ -1.23
HLA-F-230ENST00000606273 COX17Q14061 63 aa7.35□□□□□ -1.23
HLA-F-230ENST00000606273 PRR4Q16378 134 aa7.35□□□□□ -1.23
HLA-F-230ENST00000606273 SFTA2Q6UW10 78 aa7.35□□□□□ -1.23
HLA-F-230ENST00000606273 KRTAP2-2Q9BYT5 123 aa7.35□□□□□ -1.23
HLA-F-230ENST00000606273 C22orf24Q9Y442 160 aa7.35□□□□□ -1.23
HLA-F-230ENST00000606273 MYMXA0A1B0GTQ4 84 aa7.34□□□□□ -1.23
HLA-F-230ENST00000606273 C20orf202A1L168 122 aa7.34□□□□□ -1.23
HLA-F-230ENST00000606273 HERV-K104P63124 156 aa7.34□□□□□ -1.23
HLA-F-230ENST00000606273 MEIG1Q5JSS6 88 aa7.34□□□□□ -1.23
HLA-F-230ENST00000606273 DAND5Q8N907 189 aa7.34□□□□□ -1.23
HLA-F-230ENST00000606273 PSORS1C2Q9UIG4 136 aa7.34□□□□□ -1.23
HLA-F-230ENST00000606273 MIR7-3HGQ8N6C7 128 aa7.33□□□□□ -1.24
HLA-F-230ENST00000606273 A0A0J9YXY3 114 aa7.32□□□□□ -1.24
HLA-F-230ENST00000606273 VPREB1P12018 145 aa7.32□□□□□ -1.24
HLA-F-230ENST00000606273 NMUP48645 174 aa7.32□□□□□ -1.24
HLA-F-230ENST00000606273 ADAMTSL4-AS1Q5T5F5 129 aa7.32□□□□□ -1.24
HLA-F-230ENST00000606273 IGLV5-37A0A075B6J1 123 aa7.31□□□□□ -1.24
HLA-F-230ENST00000606273 PRR26Q8N8Z3 221 aa7.31□□□□□ -1.24
HLA-F-230ENST00000606273 GAGE10A6NGK3 116 aa7.3□□□□□ -1.24
HLA-F-230ENST00000606273 KRTAP10-7P60409 375 aaPredicted RBP7.3□□□□□ -1.24
HLA-F-230ENST00000606273 MRPL55Q7Z7F7 128 aaKnown RBP7.3□□□□□ -1.24
HLA-F-230ENST00000606273 PCP2Q8IVA1 136 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms