RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 C20orf202A1L168 122 aa6.12□□□□□ -1.43
TPM4-215ENST00000592138 PLA2G1BP04054 148 aaKnown RBP6.12□□□□□ -1.43
TPM4-215ENST00000592138 HERV-K104P63124 156 aa6.12□□□□□ -1.43
TPM4-215ENST00000592138 PLEKHB2Q96CS7 222 aa6.12□□□□□ -1.43
TPM4-215ENST00000592138 PMCHL2Q9BQD1 86 aa6.12□□□□□ -1.43
TPM4-215ENST00000592138 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
TPM4-215ENST00000592138 LEPROTO15243 131 aa6.11□□□□□ -1.43
TPM4-215ENST00000592138 NMUP48645 174 aa6.11□□□□□ -1.43
TPM4-215ENST00000592138 GAGE2EQ4V326 116 aa6.11□□□□□ -1.43
TPM4-215ENST00000592138 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
TPM4-215ENST00000592138 GAGE2DQ9UEU5 116 aa6.11□□□□□ -1.43
TPM4-215ENST00000592138 FLG2Q5D862 2391 aaPredicted RBP6.1□□□□□ -1.43
TPM4-215ENST00000592138 E9PLD3 99 aa6.1□□□□□ -1.43
TPM4-215ENST00000592138 KRTDAPP60985 99 aa6.1□□□□□ -1.43
TPM4-215ENST00000592138 C9orf129Q5T035 196 aaKnown RBP6.1□□□□□ -1.43
TPM4-215ENST00000592138 ERG28Q9UKR5 140 aa6.1□□□□□ -1.43
TPM4-215ENST00000592138 MYMXA0A1B0GTQ4 84 aa6.09□□□□□ -1.43
TPM4-215ENST00000592138 J3QQQ9 107 aa6.09□□□□□ -1.43
TPM4-215ENST00000592138 KRTAP10-4P60372 401 aaPredicted RBP6.09□□□□□ -1.43
TPM4-215ENST00000592138 RPL37AP61513 92 aaKnown RBP6.09□□□□□ -1.43
TPM4-215ENST00000592138 C4orf48Q5BLP8 95 aa6.09□□□□□ -1.43
TPM4-215ENST00000592138 NDUFA12Q9UI09 145 aa6.09□□□□□ -1.43
TPM4-215ENST00000592138 PLA2G2DQ9UNK4 145 aa6.09□□□□□ -1.43
TPM4-215ENST00000592138 TSPEAR-AS2P59090 65 aa6.08□□□□□ -1.44
TPM4-215ENST00000592138 LBHQ53QV2 105 aaPredicted RBP6.08□□□□□ -1.44
TPM4-215ENST00000592138 TP73-AS1Q9UF72 201 aa6.08□□□□□ -1.44
TPM4-215ENST00000592138 FAM168BA1KXE4 195 aa6.07□□□□□ -1.44
TPM4-215ENST00000592138 TSTD3H0UI37 97 aa6.07□□□□□ -1.44
TPM4-215ENST00000592138 LGALS3P17931 250 aaKnown RBP6.07□□□□□ -1.44
TPM4-215ENST00000592138 DDTP30046 118 aa6.07□□□□□ -1.44
TPM4-215ENST00000592138 PFN2P35080 140 aa6.07□□□□□ -1.44
TPM4-215ENST00000592138 PCP4P48539 62 aa6.07□□□□□ -1.44
TPM4-215ENST00000592138 KRTAP7-1Q8IUC3 87 aa6.07□□□□□ -1.44
TPM4-215ENST00000592138 XAGE1AQ9HD64 81 aa6.07□□□□□ -1.44
TPM4-215ENST00000592138 IGLV5-37A0A075B6J1 123 aa6.06□□□□□ -1.44
TPM4-215ENST00000592138 M0QXV9 152 aa6.06□□□□□ -1.44
TPM4-215ENST00000592138 FAM19A5Q7Z5A7 132 aaPredicted RBP6.06□□□□□ -1.44
TPM4-215ENST00000592138 C14orf144Q96I85 54 aa6.06□□□□□ -1.44
TPM4-215ENST00000592138 SND1-IT1Q9HBX3 110 aa6.06□□□□□ -1.44
TPM4-215ENST00000592138 PKHD1L1Q86WI1 4243 aa6.05□□□□□ -1.44
TPM4-215ENST00000592138 LINC00158P58513 81 aa6.05□□□□□ -1.44
TPM4-215ENST00000592138 PRR3P79522 188 aaKnown RBP6.05□□□□□ -1.44
TPM4-215ENST00000592138 MEIG1Q5JSS6 88 aa6.05□□□□□ -1.44
TPM4-215ENST00000592138 SERTAD4-AS1Q5TG53 156 aa6.05□□□□□ -1.44
TPM4-215ENST00000592138 PHF5AQ7RTV0 110 aaKnown RBP6.05□□□□□ -1.44
TPM4-215ENST00000592138 SMIM13P0DJ93 91 aa6.04□□□□□ -1.44
TPM4-215ENST00000592138 C22orf24Q9Y442 160 aa6.04□□□□□ -1.44
TPM4-215ENST00000592138 LOC107984156A0A0G2JMH3 177 aa6.03□□□□□ -1.44
TPM4-215ENST00000592138 INAFM2P0DMQ5 153 aa6.03□□□□□ -1.44
TPM4-215ENST00000592138 RPL24P83731 157 aaKnown RBP6.03□□□□□ -1.44
TPM4-215ENST00000592138 C21orf62-AS1Q17RA5 79 aa6.03□□□□□ -1.44
TPM4-215ENST00000592138 MRPL55Q7Z7F7 128 aaKnown RBP6.03□□□□□ -1.44
TPM4-215ENST00000592138 ARL17AQ8IVW1 177 aa6.03□□□□□ -1.44
TPM4-215ENST00000592138 IGKV2D-26A0A0A0MRZ7 120 aa6.02□□□□□ -1.45
TPM4-215ENST00000592138 A0A0J9YXY3 114 aa6.02□□□□□ -1.45
TPM4-215ENST00000592138 HSBP1L1C9JCN9 74 aa6.02□□□□□ -1.45
TPM4-215ENST00000592138 VPREB1P12018 145 aa6.02□□□□□ -1.45
TPM4-215ENST00000592138 MIR7-3HGQ8N6C7 128 aa6.02□□□□□ -1.45
TPM4-215ENST00000592138 PSORS1C2Q9UIG4 136 aa6.02□□□□□ -1.45
TPM4-215ENST00000592138 TIMM17BO60830 172 aa6.01□□□□□ -1.45
TPM4-215ENST00000592138 UBE2BP63146 152 aa6.01□□□□□ -1.45
TPM4-215ENST00000592138 ATOH7Q8N100 152 aa6.01□□□□□ -1.45
TPM4-215ENST00000592138 NKAPP1Q8N9T2 125 aa6.01□□□□□ -1.45
TPM4-215ENST00000592138 A0A0U1RRA0 63 aa6□□□□□ -1.45
TPM4-215ENST00000592138 ZNF815PA8K554 130 aa6□□□□□ -1.45
TPM4-215ENST00000592138 PRO1933Q9H354 126 aa6□□□□□ -1.45
TPM4-215ENST00000592138 LINC00167Q96N53 147 aa5.99□□□□□ -1.45
TPM4-215ENST00000592138 NDUFC2O95298 119 aa5.98□□□□□ -1.45
TPM4-215ENST00000592138 SCGB1D1O95968 90 aa5.98□□□□□ -1.45
TPM4-215ENST00000592138 HNRNPA3P51991 378 aaKnown RBP5.98□□□□□ -1.45
TPM4-215ENST00000592138 SRSF9Q13242 221 aaKnown RBP eCLIP5.98□□□□□ -1.45
TPM4-215ENST00000592138 C1orf137Q5JT78 98 aa5.98□□□□□ -1.45
TPM4-215ENST00000592138 SPINK6Q6UWN8 80 aa5.98□□□□□ -1.45
TPM4-215ENST00000592138 KRTAP11-1Q8IUC1 163 aa5.98□□□□□ -1.45
TPM4-215ENST00000592138 BOD1L2Q8IYS8 172 aa5.98□□□□□ -1.45
TPM4-215ENST00000592138 Q8NDZ9 215 aa5.98□□□□□ -1.45
TPM4-215ENST00000592138 LITAFQ99732 161 aa5.98□□□□□ -1.45
TPM4-215ENST00000592138 MIEN1Q9BRT3 115 aa5.98□□□□□ -1.45
TPM4-215ENST00000592138 LRP1Q07954 4544 aaKnown RBP5.98□□□□□ -1.45
TPM4-215ENST00000592138 IGLV1-50A0A075B6I6 118 aa5.97□□□□□ -1.45
TPM4-215ENST00000592138 TRBV10-2A0A0K0K1G8 114 aa5.97□□□□□ -1.45
TPM4-215ENST00000592138 M0R378 163 aa5.97□□□□□ -1.45
TPM4-215ENST00000592138 IGLV7-43P04211 117 aa5.97□□□□□ -1.45
TPM4-215ENST00000592138 DAND5Q8N907 189 aa5.97□□□□□ -1.45
TPM4-215ENST00000592138 TTTY13Q9BZ97 58 aa5.97□□□□□ -1.45
TPM4-215ENST00000592138 PPDPFQ9H3Y8 114 aa5.97□□□□□ -1.45
TPM4-215ENST00000592138 FAT3Q8TDW7 4589 aa5.97□□□□□ -1.45
TPM4-215ENST00000592138 TMEM238C9JI98 176 aa5.96□□□□□ -1.46
TPM4-215ENST00000592138 ADAMTSL4-AS1Q5T5F5 129 aa5.96□□□□□ -1.46
TPM4-215ENST00000592138 SCGB1D4Q6XE38 83 aa5.96□□□□□ -1.46
TPM4-215ENST00000592138 Q6ZVH6 145 aa5.96□□□□□ -1.46
TPM4-215ENST00000592138 PCP2Q8IVA1 136 aa5.96□□□□□ -1.46
TPM4-215ENST00000592138 VAMP8Q9BV40 100 aa5.96□□□□□ -1.46
TPM4-215ENST00000592138 SPANXDQ9BXN6 97 aa5.96□□□□□ -1.46
TPM4-215ENST00000592138 SPANXCQ9NY87 97 aa5.96□□□□□ -1.46
TPM4-215ENST00000592138 GAGE10A6NGK3 116 aa5.95□□□□□ -1.46
TPM4-215ENST00000592138 KRTAP29-1A8MX34 341 aaPredicted RBP5.95□□□□□ -1.46
TPM4-215ENST00000592138 BCE1O60756 84 aa5.95□□□□□ -1.46
TPM4-215ENST00000592138 OXTP01178 125 aa5.95□□□□□ -1.46
TPM4-215ENST00000592138 COPS9Q8WXC6 57 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms