RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 SCGB1A1P11684 91 aa6.73□□□□□ -1.33
VPS25-202ENST00000589219 C11orf45Q8TAV5 145 aa6.73□□□□□ -1.33
VPS25-202ENST00000589219 SIGMAR1Q99720 223 aa6.73□□□□□ -1.33
VPS25-202ENST00000589219 CSMD3Q7Z407 3707 aa6.73□□□□□ -1.33
VPS25-202ENST00000589219 DEFB131BA0A096LNP1 70 aa6.72□□□□□ -1.33
VPS25-202ENST00000589219 GVQW2A0A096LPI5 108 aaPredicted RBP6.72□□□□□ -1.33
VPS25-202ENST00000589219 ENHOQ6UWT2 76 aa6.72□□□□□ -1.33
VPS25-202ENST00000589219 WFDC10BQ8IUB3 73 aa6.71□□□□□ -1.34
VPS25-202ENST00000589219 SMIM11BQ8TCY0 68 aa6.71□□□□□ -1.34
VPS25-202ENST00000589219 TRAV10A0A0B4J240 114 aa6.7□□□□□ -1.34
VPS25-202ENST00000589219 NANOS2P60321 138 aaKnown RBP6.7□□□□□ -1.34
VPS25-202ENST00000589219 LINC01556Q5JQF7 62 aa6.7□□□□□ -1.34
VPS25-202ENST00000589219 C15orf53Q8NAA6 179 aa6.7□□□□□ -1.34
VPS25-202ENST00000589219 OR13C6PQ8NH95 151 aa6.7□□□□□ -1.34
VPS25-202ENST00000589219 LYSTQ99698 3801 aa6.7□□□□□ -1.34
VPS25-202ENST00000589219 CDIP1Q9H305 208 aa6.7□□□□□ -1.34
VPS25-202ENST00000589219 RYR2Q92736 4967 aa6.69□□□□□ -1.34
VPS25-202ENST00000589219 FAM240AA0A1B0GVK7 77 aa6.69□□□□□ -1.34
VPS25-202ENST00000589219 A0A1B0GX51 115 aa6.69□□□□□ -1.34
VPS25-202ENST00000589219 F8WDY8 70 aa6.69□□□□□ -1.34
VPS25-202ENST00000589219 DNAL4O96015 105 aa6.69□□□□□ -1.34
VPS25-202ENST00000589219 STARD9Q9P2P6 4700 aa6.69□□□□□ -1.34
VPS25-202ENST00000589219 TEX49A0A1B0GTD5 131 aa6.68□□□□□ -1.34
VPS25-202ENST00000589219 FAM218AQ96MZ4 157 aa6.68□□□□□ -1.34
VPS25-202ENST00000589219 TMEM126AQ9H061 195 aa6.68□□□□□ -1.34
VPS25-202ENST00000589219 ESRGQ1W209 222 aa6.67□□□□□ -1.34
VPS25-202ENST00000589219 C1orf43Q9BWL3 253 aa6.67□□□□□ -1.34
VPS25-202ENST00000589219 DYNC2H1Q8NCM8 4307 aaKnown RBP6.67□□□□□ -1.34
VPS25-202ENST00000589219 BAALC-AS2P0C853 105 aa6.66□□□□□ -1.34
VPS25-202ENST00000589219 DNAH10OSP0CZ25 163 aa6.66□□□□□ -1.34
VPS25-202ENST00000589219 INAFM2P0DMQ5 153 aa6.66□□□□□ -1.34
VPS25-202ENST00000589219 C21orf62-AS1Q17RA5 79 aa6.66□□□□□ -1.34
VPS25-202ENST00000589219 C10orf25Q5T742 122 aa6.66□□□□□ -1.34
VPS25-202ENST00000589219 KRTAP26-1Q6PEX3 210 aa6.66□□□□□ -1.34
VPS25-202ENST00000589219 UNQ6190/PRO20217Q6UXQ8 127 aa6.66□□□□□ -1.34
VPS25-202ENST00000589219 C6orf223Q8N319 242 aa6.66□□□□□ -1.34
VPS25-202ENST00000589219 C2orf48Q96LS8 159 aa6.66□□□□□ -1.34
VPS25-202ENST00000589219 SACSQ9NZJ4 4579 aa6.66□□□□□ -1.34
VPS25-202ENST00000589219 ZNF561-AS1K7EIQ3 104 aa6.65□□□□□ -1.34
VPS25-202ENST00000589219 ACYP1P07311 99 aa6.65□□□□□ -1.34
VPS25-202ENST00000589219 C9orf116Q5BN46 136 aaPredicted RBP6.65□□□□□ -1.34
VPS25-202ENST00000589219 C6orf48Q9UBA6 75 aa6.65□□□□□ -1.34
VPS25-202ENST00000589219 A0A087WYN8 130 aa6.64□□□□□ -1.35
VPS25-202ENST00000589219 NUPR2A6NF83 97 aa6.64□□□□□ -1.35
VPS25-202ENST00000589219 SNCGO76070 127 aa6.64□□□□□ -1.35
VPS25-202ENST00000589219 XGP55808 180 aa6.64□□□□□ -1.35
VPS25-202ENST00000589219 LINC00167Q96N53 147 aa6.64□□□□□ -1.35
VPS25-202ENST00000589219 CAMK2N2Q96S95 79 aa6.64□□□□□ -1.35
VPS25-202ENST00000589219 NCR3O14931 201 aa6.63□□□□□ -1.35
VPS25-202ENST00000589219 LECT2O14960 151 aa6.63□□□□□ -1.35
VPS25-202ENST00000589219 S100A7L2Q5SY68 101 aa6.63□□□□□ -1.35
VPS25-202ENST00000589219 C15orf56Q8N910 161 aa6.63□□□□□ -1.35
VPS25-202ENST00000589219 MT-ATP8P03928 68 aa6.62□□□□□ -1.35
VPS25-202ENST00000589219 HIGD2BQ4VC39 106 aa6.62□□□□□ -1.35
VPS25-202ENST00000589219 RMI2Q96E14 147 aa6.62□□□□□ -1.35
VPS25-202ENST00000589219 Q9HAA7 133 aa6.62□□□□□ -1.35
VPS25-202ENST00000589219 ORMDL1Q9P0S3 153 aa6.62□□□□□ -1.35
VPS25-202ENST00000589219 IGKV2D-24A0A075B6R9 120 aa6.61□□□□□ -1.35
VPS25-202ENST00000589219 IGLV6-57P01721 117 aa6.61□□□□□ -1.35
VPS25-202ENST00000589219 LINC00476Q8WZB0 136 aa6.61□□□□□ -1.35
VPS25-202ENST00000589219 LINC00526Q96FQ7 95 aa6.61□□□□□ -1.35
VPS25-202ENST00000589219 UPK3BQ9BT76 320 aa6.61□□□□□ -1.35
VPS25-202ENST00000589219 EPPK1P58107 5090 aaKnown RBP6.6□□□□□ -1.35
VPS25-202ENST00000589219 DNAH1Q9P2D7 4330 aa6.6□□□□□ -1.35
VPS25-202ENST00000589219 LY6G6CO95867 125 aa6.6□□□□□ -1.35
VPS25-202ENST00000589219 Q8NDZ9 215 aa6.6□□□□□ -1.35
VPS25-202ENST00000589219 C22orf24Q9Y442 160 aa6.6□□□□□ -1.35
VPS25-202ENST00000589219 HYDINQ4G0P3 5121 aa6.6□□□□□ -1.35
VPS25-202ENST00000589219 NDUFC2-KCTD14E9PQ53 114 aa6.59□□□□□ -1.35
VPS25-202ENST00000589219 H3BQ85 93 aa6.59□□□□□ -1.35
VPS25-202ENST00000589219 C6orf99Q4VX62 202 aa6.59□□□□□ -1.35
VPS25-202ENST00000589219 Q6Q795 121 aa6.59□□□□□ -1.35
VPS25-202ENST00000589219 Q6ZRU5 148 aa6.59□□□□□ -1.35
VPS25-202ENST00000589219 OBSCN-AS1Q96MR7 158 aa6.59□□□□□ -1.35
VPS25-202ENST00000589219 LINC00588Q9Y4M8 146 aa6.59□□□□□ -1.35
VPS25-202ENST00000589219 PRR3P79522 188 aaKnown RBP6.58□□□□□ -1.36
VPS25-202ENST00000589219 RPL18AQ02543 176 aaKnown RBP6.58□□□□□ -1.36
VPS25-202ENST00000589219 Q8N814 137 aa6.58□□□□□ -1.36
VPS25-202ENST00000589219 DIRC1Q969H9 104 aa6.58□□□□□ -1.36
VPS25-202ENST00000589219 BIRC6Q9NR09 4857 aa6.57□□□□□ -1.36
VPS25-202ENST00000589219 TRAV23DV6A0A075B6W5 121 aa6.57□□□□□ -1.36
VPS25-202ENST00000589219 TRBV7-6A0A0J9YX20 115 aa6.57□□□□□ -1.36
VPS25-202ENST00000589219 VPREB1P12018 145 aa6.57□□□□□ -1.36
VPS25-202ENST00000589219 SYCNQ0VAF6 134 aa6.57□□□□□ -1.36
VPS25-202ENST00000589219 LINC00575Q6W349 94 aa6.57□□□□□ -1.36
VPS25-202ENST00000589219 JMJD7-PLA2G4BH0Y9G9 81 aa6.56□□□□□ -1.36
VPS25-202ENST00000589219 TMEM256-PLSCR3K7ERE1 68 aa6.56□□□□□ -1.36
VPS25-202ENST00000589219 M0R378 163 aa6.56□□□□□ -1.36
VPS25-202ENST00000589219 TLX1NBP0CAT3 122 aa6.56□□□□□ -1.36
VPS25-202ENST00000589219 XAGE1AQ9HD64 81 aa6.56□□□□□ -1.36
VPS25-202ENST00000589219 PLECQ15149 4684 aaKnown RBP6.56□□□□□ -1.36
VPS25-202ENST00000589219 TRBV10-3A0A0K0K1G6 114 aa6.55□□□□□ -1.36
VPS25-202ENST00000589219 GHRHP01286 108 aa6.55□□□□□ -1.36
VPS25-202ENST00000589219 GAGE2BQ13066 116 aa6.55□□□□□ -1.36
VPS25-202ENST00000589219 GAGE2EQ4V326 116 aa6.55□□□□□ -1.36
VPS25-202ENST00000589219 GAGE2DQ9UEU5 116 aa6.55□□□□□ -1.36
VPS25-202ENST00000589219 TRBV7-7A0A0K0K1E9 115 aa6.54□□□□□ -1.36
VPS25-202ENST00000589219 A0A1B0GV72 72 aa6.54□□□□□ -1.36
VPS25-202ENST00000589219 hADV29S1A0JD25 119 aa6.54□□□□□ -1.36
VPS25-202ENST00000589219 GAGE2AQ6NT46 116 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms