RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 PYY3Q5JQD4 70 aa9.43□□□□□ -0.9
MKS1-210ENST00000581180 PHF5AQ7RTV0 110 aaKnown RBP9.43□□□□□ -0.9
MKS1-210ENST00000581180 LITAFQ99732 161 aa9.43□□□□□ -0.9
MKS1-210ENST00000581180 IGLV5-37A0A075B6J1 123 aa9.42□□□□□ -0.9
MKS1-210ENST00000581180 TIMM17BO60830 172 aa9.42□□□□□ -0.9
MKS1-210ENST00000581180 ADAMTSL4-AS1Q5T5F5 129 aa9.42□□□□□ -0.9
MKS1-210ENST00000581180 DAND5Q8N907 189 aa9.42□□□□□ -0.9
MKS1-210ENST00000581180 Q8NDZ9 215 aa9.42□□□□□ -0.9
MKS1-210ENST00000581180 LOC107984156A0A0G2JMH3 177 aa9.41□□□□□ -0.9
MKS1-210ENST00000581180 M0QXV9 152 aa9.41□□□□□ -0.9
MKS1-210ENST00000581180 VPREB1P12018 145 aa9.41□□□□□ -0.9
MKS1-210ENST00000581180 Q5VSD8 79 aa9.41□□□□□ -0.9
MKS1-210ENST00000581180 ARL17AQ8IVW1 177 aa9.41□□□□□ -0.9
MKS1-210ENST00000581180 TP73-AS1Q9UF72 201 aa9.41□□□□□ -0.9
MKS1-210ENST00000581180 C22orf24Q9Y442 160 aa9.41□□□□□ -0.9
MKS1-210ENST00000581180 FAM229AH3BQW9 127 aa9.4□□□□□ -0.9
MKS1-210ENST00000581180 KRTAP10-4P60372 401 aaPredicted RBP9.4□□□□□ -0.9
MKS1-210ENST00000581180 C7orf33Q8WU49 177 aa9.4□□□□□ -0.9
MKS1-210ENST00000581180 KRTAP4-5Q9BYR2 181 aa9.4□□□□□ -0.9
MKS1-210ENST00000581180 KRTAP11-1Q8IUC1 163 aa9.39□□□□□ -0.91
MKS1-210ENST00000581180 SOSTDC1Q6X4U4 206 aa9.38□□□□□ -0.91
MKS1-210ENST00000581180 EIF4EBP3O60516 100 aaPredicted RBP9.37□□□□□ -0.91
MKS1-210ENST00000581180 RPL37AP61513 92 aaKnown RBP9.37□□□□□ -0.91
MKS1-210ENST00000581180 RPL24P83731 157 aaKnown RBP9.37□□□□□ -0.91
MKS1-210ENST00000581180 SCGB1D4Q6XE38 83 aa9.37□□□□□ -0.91
MKS1-210ENST00000581180 MRPL55Q7Z7F7 128 aaKnown RBP9.37□□□□□ -0.91
MKS1-210ENST00000581180 BOD1L2Q8IYS8 172 aa9.37□□□□□ -0.91
MKS1-210ENST00000581180 VAMP8Q9BV40 100 aa9.37□□□□□ -0.91
MKS1-210ENST00000581180 PAM16Q9Y3D7 125 aa9.37□□□□□ -0.91
MKS1-210ENST00000581180 PLA2G1BP04054 148 aaKnown RBP9.36□□□□□ -0.91
MKS1-210ENST00000581180 COX8AP10176 69 aa9.36□□□□□ -0.91
MKS1-210ENST00000581180 SPATA45Q537H7 98 aa9.36□□□□□ -0.91
MKS1-210ENST00000581180 LBHQ53QV2 105 aaPredicted RBP9.36□□□□□ -0.91
MKS1-210ENST00000581180 NKAPP1Q8N9T2 125 aa9.36□□□□□ -0.91
MKS1-210ENST00000581180 LINC00167Q96N53 147 aa9.36□□□□□ -0.91
MKS1-210ENST00000581180 LINC00308Q8TCZ7 52 aa9.35□□□□□ -0.91
MKS1-210ENST00000581180 SPANXDQ9BXN6 97 aa9.35□□□□□ -0.91
MKS1-210ENST00000581180 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
MKS1-210ENST00000581180 PKHD1L1Q86WI1 4243 aa9.34□□□□□ -0.91
MKS1-210ENST00000581180 TMEM238C9JI98 176 aa9.34□□□□□ -0.91
MKS1-210ENST00000581180 DLEU1O43261 78 aa9.34□□□□□ -0.91
MKS1-210ENST00000581180 PRR3P79522 188 aaKnown RBP9.34□□□□□ -0.91
MKS1-210ENST00000581180 PSORS1C2Q9UIG4 136 aa9.34□□□□□ -0.91
MKS1-210ENST00000581180 NPC2P61916 151 aa9.33□□□□□ -0.92
MKS1-210ENST00000581180 UBE2BP63146 152 aa9.33□□□□□ -0.92
MKS1-210ENST00000581180 MIEN1Q9BRT3 115 aa9.33□□□□□ -0.92
MKS1-210ENST00000581180 GAGE10A6NGK3 116 aa9.32□□□□□ -0.92
MKS1-210ENST00000581180 NDUFC2O95298 119 aa9.32□□□□□ -0.92
MKS1-210ENST00000581180 C14orf144Q96I85 54 aa9.32□□□□□ -0.92
MKS1-210ENST00000581180 SRRM2Q9UQ35 2752 aaKnown RBP9.32□□□□□ -0.92
MKS1-210ENST00000581180 LOC105371267A0A1B0GV96 52 aa9.31□□□□□ -0.92
MKS1-210ENST00000581180 RPL37AP8A6NKH3 93 aa9.31□□□□□ -0.92
MKS1-210ENST00000581180 M0R378 163 aa9.31□□□□□ -0.92
MKS1-210ENST00000581180 Q6ZVH6 145 aa9.31□□□□□ -0.92
MKS1-210ENST00000581180 PPDPFQ9H3Y8 114 aa9.31□□□□□ -0.92
MKS1-210ENST00000581180 SPANXB1Q9NS25 103 aaPredicted RBP9.31□□□□□ -0.92
MKS1-210ENST00000581180 ABCA13Q86UQ4 5058 aa9.3□□□□□ -0.92
MKS1-210ENST00000581180 IGLV1-50A0A075B6I6 118 aa9.3□□□□□ -0.92
MKS1-210ENST00000581180 TRBV10-2A0A0K0K1G8 114 aa9.29□□□□□ -0.92
MKS1-210ENST00000581180 NCR3O14931 201 aa9.29□□□□□ -0.92
MKS1-210ENST00000581180 IFITM1P13164 125 aa9.29□□□□□ -0.92
MKS1-210ENST00000581180 HNRNPA3P51991 378 aaKnown RBP9.29□□□□□ -0.92
MKS1-210ENST00000581180 FLG2Q5D862 2391 aaPredicted RBP9.29□□□□□ -0.92
MKS1-210ENST00000581180 C1orf137Q5JT78 98 aa9.28□□□□□ -0.92
MKS1-210ENST00000581180 SLC25A34Q6PIV7 304 aa9.28□□□□□ -0.92
MKS1-210ENST00000581180 IGKV2-28A0A075B6P5 120 aa9.27□□□□□ -0.93
MKS1-210ENST00000581180 IGKV2D-28P01615 120 aa9.27□□□□□ -0.93
MKS1-210ENST00000581180 MUSTN1Q8IVN3 82 aa9.27□□□□□ -0.93
MKS1-210ENST00000581180 C2orf91Q6ZV80 131 aa9.26□□□□□ -0.93
MKS1-210ENST00000581180 COPS9Q8WXC6 57 aa9.26□□□□□ -0.93
MKS1-210ENST00000581180 HIGD1BQ9P298 99 aa9.26□□□□□ -0.93
MKS1-210ENST00000581180 TRBV10-3A0A0K0K1G6 114 aa9.25□□□□□ -0.93
MKS1-210ENST00000581180 IGLV7-43P04211 117 aa9.25□□□□□ -0.93
MKS1-210ENST00000581180 S100A12P80511 92 aa9.25□□□□□ -0.93
MKS1-210ENST00000581180 SRSF9Q13242 221 aaKnown RBP eCLIP9.25□□□□□ -0.93
MKS1-210ENST00000581180 SMIM6P0DI80 62 aa9.24□□□□□ -0.93
MKS1-210ENST00000581180 INAFM2P0DMQ5 153 aa9.24□□□□□ -0.93
MKS1-210ENST00000581180 BCE1O60756 84 aa9.23□□□□□ -0.93
MKS1-210ENST00000581180 IGLV6-57P01721 117 aa9.23□□□□□ -0.93
MKS1-210ENST00000581180 TMEM126AQ9H061 195 aa9.23□□□□□ -0.93
MKS1-210ENST00000581180 KCNQ1DNQ9H478 68 aa9.23□□□□□ -0.93
MKS1-210ENST00000581180 DDTP30046 118 aa9.22□□□□□ -0.93
MKS1-210ENST00000581180 REG3GQ6UW15 175 aa9.22□□□□□ -0.93
MKS1-210ENST00000581180 LINC00518Q8N0U6 118 aa9.22□□□□□ -0.93
MKS1-210ENST00000581180 PRYO14603 147 aa9.21□□□□□ -0.94
MKS1-210ENST00000581180 SPRR1AP35321 89 aa9.21□□□□□ -0.94
MKS1-210ENST00000581180 LINC00337Q8N6G1 96 aa9.21□□□□□ -0.94
MKS1-210ENST00000581180 S100A7L2Q5SY68 101 aa9.2□□□□□ -0.94
MKS1-210ENST00000581180 SPINK6Q6UWN8 80 aa9.2□□□□□ -0.94
MKS1-210ENST00000581180 KRTAP13-1Q8IUC0 172 aa9.2□□□□□ -0.94
MKS1-210ENST00000581180 HIST1H4GQ99525 98 aa9.2□□□□□ -0.94
MKS1-210ENST00000581180 FAT3Q8TDW7 4589 aa9.19□□□□□ -0.94
MKS1-210ENST00000581180 ZNF861PO60384 105 aa9.19□□□□□ -0.94
MKS1-210ENST00000581180 UQCR10Q9UDW1 63 aa9.19□□□□□ -0.94
MKS1-210ENST00000581180 A4D1N5 150 aa9.18□□□□□ -0.94
MKS1-210ENST00000581180 KRTAP4-16G5E9R7 235 aaPredicted RBP9.18□□□□□ -0.94
MKS1-210ENST00000581180 LRP1Q07954 4544 aaKnown RBP9.18□□□□□ -0.94
MKS1-210ENST00000581180 TAL2Q16559 108 aa9.17□□□□□ -0.94
MKS1-210ENST00000581180 MYCBP2O75592 4640 aa9.17□□□□□ -0.94
MKS1-210ENST00000581180 TRAV23DV6A0A075B6W5 121 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms