RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 SERP1Q9Y6X1 66 aa6.95□□□□□ -1.3
MSI2-209ENST00000579483 ADAMTSL4-AS1Q5T5F5 129 aa6.95□□□□□ -1.3
MSI2-209ENST00000579483 C3orf22Q8N5N4 141 aa6.94□□□□□ -1.3
MSI2-209ENST00000579483 NDUFC1O43677 76 aa6.94□□□□□ -1.3
MSI2-209ENST00000579483 MUC4Q99102 2169 aa6.93□□□□□ -1.3
MSI2-209ENST00000579483 A0A096LNJ9 63 aa6.93□□□□□ -1.3
MSI2-209ENST00000579483 Q8NBF4 154 aa6.93□□□□□ -1.3
MSI2-209ENST00000579483 A0A1B0GW54 56 aa6.93□□□□□ -1.3
MSI2-209ENST00000579483 BCE1O60756 84 aa6.93□□□□□ -1.3
MSI2-209ENST00000579483 LINC00612Q8N6U2 182 aa6.91□□□□□ -1.3
MSI2-209ENST00000579483 SRCAPQ6ZRS2 3230 aa6.91□□□□□ -1.3
MSI2-209ENST00000579483 PHF5AQ7RTV0 110 aaKnown RBP6.91□□□□□ -1.3
MSI2-209ENST00000579483 MOBPQ13875 183 aa6.91□□□□□ -1.3
MSI2-209ENST00000579483 SPACA4Q8TDM5 124 aa6.91□□□□□ -1.3
MSI2-209ENST00000579483 C20orf197Q8N268 126 aa6.9□□□□□ -1.3
MSI2-209ENST00000579483 A0A087WYN8 130 aa6.9□□□□□ -1.31
MSI2-209ENST00000579483 ATP5EP56381 51 aaPredicted RBP6.9□□□□□ -1.31
MSI2-209ENST00000579483 LINC00310P59036 64 aa6.9□□□□□ -1.31
MSI2-209ENST00000579483 A0A087WTM6 91 aa6.9□□□□□ -1.31
MSI2-209ENST00000579483 FAM240AA0A1B0GVK7 77 aa6.89□□□□□ -1.31
MSI2-209ENST00000579483 APLNQ9ULZ1 77 aa6.89□□□□□ -1.31
MSI2-209ENST00000579483 UQCRQO14949 82 aa6.88□□□□□ -1.31
MSI2-209ENST00000579483 SPAG11AQ6PDA7 123 aa6.88□□□□□ -1.31
MSI2-209ENST00000579483 WIPF1O43516 503 aa6.88□□□□□ -1.31
MSI2-209ENST00000579483 Q6ZRX8 168 aa6.88□□□□□ -1.31
MSI2-209ENST00000579483 EPM2AB3EWF7 344 aa6.87□□□□□ -1.31
MSI2-209ENST00000579483 V9GYY9 64 aa6.87□□□□□ -1.31
MSI2-209ENST00000579483 PRR34Q9NV39 138 aa6.86□□□□□ -1.31
MSI2-209ENST00000579483 ELOF1P60002 83 aaKnown RBP6.86□□□□□ -1.31
MSI2-209ENST00000579483 GIG44P09565 113 aaPredicted RBP6.85□□□□□ -1.31
MSI2-209ENST00000579483 FLNAP21333 2647 aaKnown RBP6.85□□□□□ -1.31
MSI2-209ENST00000579483 KIAA0087Q14695 138 aa6.85□□□□□ -1.31
MSI2-209ENST00000579483 LINC01547P58512 204 aaPredicted RBP6.85□□□□□ -1.31
MSI2-209ENST00000579483 C9orf163Q8N9P6 203 aa6.85□□□□□ -1.31
MSI2-209ENST00000579483 MAST4O15021 2626 aa6.84□□□□□ -1.31
MSI2-209ENST00000579483 ITPR3Q14573 2671 aa6.84□□□□□ -1.31
MSI2-209ENST00000579483 SERP2Q8N6R1 65 aa6.84□□□□□ -1.31
MSI2-209ENST00000579483 LINC00476Q8WZB0 136 aa6.84□□□□□ -1.31
MSI2-209ENST00000579483 Q8N3U1 123 aa6.84□□□□□ -1.32
MSI2-209ENST00000579483 USP24Q9UPU5 2620 aa6.84□□□□□ -1.32
MSI2-209ENST00000579483 CHTF8P0CG12 524 aa6.83□□□□□ -1.32
MSI2-209ENST00000579483 ZNF575Q86XF7 245 aa6.83□□□□□ -1.32
MSI2-209ENST00000579483 Q9UF83 564 aa6.83□□□□□ -1.32
MSI2-209ENST00000579483 ATRQ13535 2644 aa6.83□□□□□ -1.32
MSI2-209ENST00000579483 CFAP46Q8IYW2 2715 aa6.82□□□□□ -1.32
MSI2-209ENST00000579483 PRR4Q16378 134 aa6.82□□□□□ -1.32
MSI2-209ENST00000579483 LINC00208Q96KT6 92 aa6.81□□□□□ -1.32
MSI2-209ENST00000579483 TP53AIP1Q9HCN2 124 aa6.81□□□□□ -1.32
MSI2-209ENST00000579483 FAM30AQ9NZY2 134 aa6.81□□□□□ -1.32
MSI2-209ENST00000579483 SSBP3-AS1Q7Z2R9 100 aa6.81□□□□□ -1.32
MSI2-209ENST00000579483 HCG22E2RYF7 251 aa6.8□□□□□ -1.32
MSI2-209ENST00000579483 ATP11AUNQ6ZP68 121 aa6.8□□□□□ -1.32
MSI2-209ENST00000579483 ZNF861PO60384 105 aa6.79□□□□□ -1.32
MSI2-209ENST00000579483 TLX1NBP0CAT3 122 aa6.79□□□□□ -1.32
MSI2-209ENST00000579483 CASC10Q5T4H9 136 aa6.79□□□□□ -1.32
MSI2-209ENST00000579483 TRAV7A0A075B6U4 112 aa6.79□□□□□ -1.32
MSI2-209ENST00000579483 VPREB1P12018 145 aa6.79□□□□□ -1.32
MSI2-209ENST00000579483 MT-ATP8P03928 68 aa6.79□□□□□ -1.32
MSI2-209ENST00000579483 CNBPP62633 177 aaKnown RBP6.78□□□□□ -1.32
MSI2-209ENST00000579483 LINC00304Q8N9R0 145 aa6.78□□□□□ -1.32
MSI2-209ENST00000579483 hDV103S1A0JD37 113 aa6.77□□□□□ -1.32
MSI2-209ENST00000579483 C8orf87E5RJ46 101 aa6.77□□□□□ -1.33
MSI2-209ENST00000579483 LINC00313P59037 77 aa6.77□□□□□ -1.33
MSI2-209ENST00000579483 CXCL6P80162 114 aa6.77□□□□□ -1.33
MSI2-209ENST00000579483 IGLV1-50A0A075B6I6 118 aa6.77□□□□□ -1.33
MSI2-209ENST00000579483 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
MSI2-209ENST00000579483 RETNLBQ9BQ08 111 aa6.76□□□□□ -1.33
MSI2-209ENST00000579483 KCNQ1DNQ9H478 68 aa6.76□□□□□ -1.33
MSI2-209ENST00000579483 H0Y9P7 68 aa6.75□□□□□ -1.33
MSI2-209ENST00000579483 C15orf56Q8N910 161 aa6.75□□□□□ -1.33
MSI2-209ENST00000579483 CDIP1Q9H305 208 aa6.75□□□□□ -1.33
MSI2-209ENST00000579483 IGKV2D-30A0A075B6S6 120 aa6.75□□□□□ -1.33
MSI2-209ENST00000579483 IGKV2-30P06310 120 aa6.75□□□□□ -1.33
MSI2-209ENST00000579483 Q6Q795 121 aa6.75□□□□□ -1.33
MSI2-209ENST00000579483 DEFB116Q30KQ4 102 aa6.74□□□□□ -1.33
MSI2-209ENST00000579483 IGLV6-57P01721 117 aa6.74□□□□□ -1.33
MSI2-209ENST00000579483 LINC00528Q8N1L1 170 aa6.73□□□□□ -1.33
MSI2-209ENST00000579483 GOLGB1Q14789 3259 aaKnown RBP6.73□□□□□ -1.33
MSI2-209ENST00000579483 COX7CP15954 63 aa6.73□□□□□ -1.33
MSI2-209ENST00000579483 SMR3BP02814 79 aaPredicted RBP6.72□□□□□ -1.33
MSI2-209ENST00000579483 ST20-AS1Q8NBB2 130 aa6.72□□□□□ -1.33
MSI2-209ENST00000579483 SOSTDC1Q6X4U4 206 aa6.72□□□□□ -1.33
MSI2-209ENST00000579483 IGLV7-43P04211 117 aa6.72□□□□□ -1.33
MSI2-209ENST00000579483 SNURFQ9Y675 71 aa6.72□□□□□ -1.33
MSI2-209ENST00000579483 TRBV7-4A0A0J9YYF1 115 aa6.71□□□□□ -1.33
MSI2-209ENST00000579483 COX6B2Q6YFQ2 88 aa6.71□□□□□ -1.33
MSI2-209ENST00000579483 SERTAD4-AS1Q5TG53 156 aa6.71□□□□□ -1.34
MSI2-209ENST00000579483 ZNF292O60281 2723 aa6.71□□□□□ -1.34
MSI2-209ENST00000579483 FAM168BA1KXE4 195 aa6.7□□□□□ -1.34
MSI2-209ENST00000579483 BAHCC1Q9P281 2608 aa6.7□□□□□ -1.34
MSI2-209ENST00000579483 LOC110117498A0A087WWA1 95 aa6.69□□□□□ -1.34
MSI2-209ENST00000579483 Q96NJ1 140 aa6.69□□□□□ -1.34
MSI2-209ENST00000579483 KRTAP21-3Q3LHN1 58 aa6.69□□□□□ -1.34
MSI2-209ENST00000579483 PCOTHQ58A44 107 aa6.68□□□□□ -1.34
MSI2-209ENST00000579483 PRRC2CQ9Y520 2896 aaKnown RBP6.68□□□□□ -1.34
MSI2-209ENST00000579483 H3BPC8 53 aa6.67□□□□□ -1.34
MSI2-209ENST00000579483 C1orf64Q8NEQ6 169 aa6.67□□□□□ -1.34
MSI2-209ENST00000579483 LINC00846Q9NV44 126 aa6.67□□□□□ -1.34
MSI2-209ENST00000579483 TNP2Q05952 138 aa6.67□□□□□ -1.34
MSI2-209ENST00000579483 SETXQ7Z333 2677 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 684.8 ms