RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 F8WDY8 70 aa12.51□□□□□ -0.41
SPNS3-204ENST00000575194 CSMD3Q7Z407 3707 aa12.51□□□□□ -0.41
SPNS3-204ENST00000575194 LINC00526Q96FQ7 95 aa12.49□□□□□ -0.41
SPNS3-204ENST00000575194 C2orf48Q96LS8 159 aa12.49□□□□□ -0.41
SPNS3-204ENST00000575194 CAMK2N2Q96S95 79 aa12.48□□□□□ -0.41
SPNS3-204ENST00000575194 TMEM126AQ9H061 195 aa12.48□□□□□ -0.41
SPNS3-204ENST00000575194 IGKV2D-24A0A075B6R9 120 aa12.48□□□□□ -0.41
SPNS3-204ENST00000575194 C6orf48Q9UBA6 75 aa12.48□□□□□ -0.41
SPNS3-204ENST00000575194 FAM218AQ96MZ4 157 aa12.47□□□□□ -0.41
SPNS3-204ENST00000575194 LINC00588Q9Y4M8 146 aa12.47□□□□□ -0.41
SPNS3-204ENST00000575194 DNAL4O96015 105 aa12.46□□□□□ -0.41
SPNS3-204ENST00000575194 HIGD2BQ4VC39 106 aa12.46□□□□□ -0.41
SPNS3-204ENST00000575194 C15orf56Q8N910 161 aa12.46□□□□□ -0.41
SPNS3-204ENST00000575194 TEX49A0A1B0GTD5 131 aa12.44□□□□□ -0.42
SPNS3-204ENST00000575194 RMI2Q96E14 147 aa12.44□□□□□ -0.42
SPNS3-204ENST00000575194 NCR3O14931 201 aa12.43□□□□□ -0.42
SPNS3-204ENST00000575194 S100A7L2Q5SY68 101 aa12.43□□□□□ -0.42
SPNS3-204ENST00000575194 UPK3BQ9BT76 320 aa12.43□□□□□ -0.42
SPNS3-204ENST00000575194 TENM2Q9NT68 2774 aa12.43□□□□□ -0.42
SPNS3-204ENST00000575194 BAALC-AS2P0C853 105 aa12.42□□□□□ -0.42
SPNS3-204ENST00000575194 SIGMAR1Q99720 223 aa12.42□□□□□ -0.42
SPNS3-204ENST00000575194 DYNC2H1Q8NCM8 4307 aaKnown RBP12.42□□□□□ -0.42
SPNS3-204ENST00000575194 PRR3P79522 188 aaKnown RBP12.42□□□□□ -0.42
SPNS3-204ENST00000575194 Q9HAA7 133 aa12.42□□□□□ -0.42
SPNS3-204ENST00000575194 A0A1B0GX51 115 aa12.41□□□□□ -0.42
SPNS3-204ENST00000575194 A0A087WYN8 130 aa12.4□□□□□ -0.42
SPNS3-204ENST00000575194 Q6ZRU5 148 aa12.4□□□□□ -0.43
SPNS3-204ENST00000575194 SNCGO76070 127 aa12.38□□□□□ -0.43
SPNS3-204ENST00000575194 Q8NDZ9 215 aa12.38□□□□□ -0.43
SPNS3-204ENST00000575194 CDIP1Q9H305 208 aa12.38□□□□□ -0.43
SPNS3-204ENST00000575194 STARD9Q9P2P6 4700 aa12.38□□□□□ -0.43
SPNS3-204ENST00000575194 NDUFC2-KCTD14E9PQ53 114 aa12.37□□□□□ -0.43
SPNS3-204ENST00000575194 LECT2O14960 151 aa12.37□□□□□ -0.43
SPNS3-204ENST00000575194 PCP4P48539 62 aa12.37□□□□□ -0.43
SPNS3-204ENST00000575194 SYCNQ0VAF6 134 aa12.37□□□□□ -0.43
SPNS3-204ENST00000575194 IGLV6-57P01721 117 aa12.36□□□□□ -0.43
SPNS3-204ENST00000575194 RPL18AQ02543 176 aaKnown RBP12.35□□□□□ -0.43
SPNS3-204ENST00000575194 PLECQ15149 4684 aaKnown RBP12.34□□□□□ -0.43
SPNS3-204ENST00000575194 FAM240AA0A1B0GVK7 77 aa12.34□□□□□ -0.43
SPNS3-204ENST00000575194 WWC2-AS2Q96NR7 200 aa12.34□□□□□ -0.43
SPNS3-204ENST00000575194 XAGE1AQ9HD64 81 aa12.34□□□□□ -0.43
SPNS3-204ENST00000575194 INAFM2P0DMQ5 153 aa12.34□□□□□ -0.43
SPNS3-204ENST00000575194 LINC00167Q96N53 147 aa12.33□□□□□ -0.44
SPNS3-204ENST00000575194 ORMDL1Q9P0S3 153 aa12.33□□□□□ -0.44
SPNS3-204ENST00000575194 C6orf99Q4VX62 202 aa12.32□□□□□ -0.44
SPNS3-204ENST00000575194 NUPR2A6NF83 97 aa12.31□□□□□ -0.44
SPNS3-204ENST00000575194 SCGB1A1P11684 91 aa12.31□□□□□ -0.44
SPNS3-204ENST00000575194 Q8N814 137 aa12.31□□□□□ -0.44
SPNS3-204ENST00000575194 VPREB1P12018 145 aa12.3□□□□□ -0.44
SPNS3-204ENST00000575194 TRAV23DV6A0A075B6W5 121 aa12.29□□□□□ -0.44
SPNS3-204ENST00000575194 USP17L23D6RBM5 183 aa12.29□□□□□ -0.44
SPNS3-204ENST00000575194 M0R378 163 aa12.29□□□□□ -0.44
SPNS3-204ENST00000575194 ACYP1P07311 99 aa12.29□□□□□ -0.44
SPNS3-204ENST00000575194 C22orf24Q9Y442 160 aa12.29□□□□□ -0.44
SPNS3-204ENST00000575194 LYSTQ99698 3801 aa12.29□□□□□ -0.44
SPNS3-204ENST00000575194 TRBV10-3A0A0K0K1G6 114 aa12.28□□□□□ -0.44
SPNS3-204ENST00000575194 TLX1NBP0CAT3 122 aa12.28□□□□□ -0.44
SPNS3-204ENST00000575194 GAGE2EQ4V326 116 aa12.28□□□□□ -0.44
SPNS3-204ENST00000575194 UBE2DNLQ8IWF7 75 aa12.28□□□□□ -0.44
SPNS3-204ENST00000575194 DIRC1Q969H9 104 aa12.28□□□□□ -0.44
SPNS3-204ENST00000575194 GAGE2DQ9UEU5 116 aa12.28□□□□□ -0.44
SPNS3-204ENST00000575194 APLNQ9ULZ1 77 aa12.28□□□□□ -0.44
SPNS3-204ENST00000575194 XGP55808 180 aa12.26□□□□□ -0.45
SPNS3-204ENST00000575194 LINC00575Q6W349 94 aa12.26□□□□□ -0.45
SPNS3-204ENST00000575194 Q6ZRP5 223 aa12.26□□□□□ -0.45
SPNS3-204ENST00000575194 TRBV7-6A0A0J9YX20 115 aa12.25□□□□□ -0.45
SPNS3-204ENST00000575194 TMEM256-PLSCR3K7ERE1 68 aa12.24□□□□□ -0.45
SPNS3-204ENST00000575194 SLPIP03973 132 aa12.24□□□□□ -0.45
SPNS3-204ENST00000575194 hADV29S1A0JD25 119 aa12.23□□□□□ -0.45
SPNS3-204ENST00000575194 MT-ATP8P03928 68 aa12.23□□□□□ -0.45
SPNS3-204ENST00000575194 OBSCN-AS1Q96MR7 158 aa12.23□□□□□ -0.45
SPNS3-204ENST00000575194 H3BQ85 93 aa12.23□□□□□ -0.45
SPNS3-204ENST00000575194 ZNF73O43830 326 aaPredicted RBP12.22□□□□□ -0.45
SPNS3-204ENST00000575194 CASC10Q5T4H9 136 aa12.22□□□□□ -0.45
SPNS3-204ENST00000575194 NKAPP1Q8N9T2 125 aa12.21□□□□□ -0.45
SPNS3-204ENST00000575194 PLA2G2DQ9UNK4 145 aa12.21□□□□□ -0.45
SPNS3-204ENST00000575194 C3orf84H3BNL1 204 aa12.2□□□□□ -0.46
SPNS3-204ENST00000575194 COX7BP24311 80 aa12.2□□□□□ -0.46
SPNS3-204ENST00000575194 C9orf129Q5T035 196 aaKnown RBP12.2□□□□□ -0.46
SPNS3-204ENST00000575194 JMJD7-PLA2G4BH0Y9G9 81 aa12.19□□□□□ -0.46
SPNS3-204ENST00000575194 C21orf62-AS1Q17RA5 79 aa12.18□□□□□ -0.46
SPNS3-204ENST00000575194 GHRHP01286 108 aa12.17□□□□□ -0.46
SPNS3-204ENST00000575194 ELOF1P60002 83 aaKnown RBP12.17□□□□□ -0.46
SPNS3-204ENST00000575194 LOC107984640A0A0U1RRK4 108 aa12.17□□□□□ -0.46
SPNS3-204ENST00000575194 GAGE2AQ6NT46 116 aa12.17□□□□□ -0.46
SPNS3-204ENST00000575194 C14orf132Q9NPU4 83 aa12.16□□□□□ -0.46
SPNS3-204ENST00000575194 DNAH1Q9P2D7 4330 aa12.16□□□□□ -0.46
SPNS3-204ENST00000575194 IGLV5-37A0A075B6J1 123 aa12.15□□□□□ -0.46
SPNS3-204ENST00000575194 PSCAO43653 123 aa12.15□□□□□ -0.46
SPNS3-204ENST00000575194 TTC32Q5I0X7 151 aa12.15□□□□□ -0.46
SPNS3-204ENST00000575194 VPS13DQ5THJ4 4388 aa12.15□□□□□ -0.46
SPNS3-204ENST00000575194 KRTAP1-5Q9BYS1 174 aa12.14□□□□□ -0.47
SPNS3-204ENST00000575194 C14orf177Q52M58 125 aa12.14□□□□□ -0.47
SPNS3-204ENST00000575194 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.13□□□□□ -0.47
SPNS3-204ENST00000575194 SERTAD4-AS1Q5TG53 156 aa12.12□□□□□ -0.47
SPNS3-204ENST00000575194 KCNQ1DNQ9H478 68 aa12.11□□□□□ -0.47
SPNS3-204ENST00000575194 GAGE2BQ13066 116 aa12.11□□□□□ -0.47
SPNS3-204ENST00000575194 Q6ZQY7 126 aa12.11□□□□□ -0.47
SPNS3-204ENST00000575194 C7orf33Q8WU49 177 aa12.11□□□□□ -0.47
SPNS3-204ENST00000575194 CNBPP62633 177 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms